Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020878
CDS Infomation

pacid=37466389 polypeptide=PGSC0003DMP400014222 locus=PGSC0003DMG400008083 ID=PGSC0003DMT400020878.v4.03 annot-version=v4.03
Sequence

ATGAGGCAGAAAGGTCATATATTTGATGGTTTTGTGATCCTGGTGTTTCTGCTCTCAGTT
TCTACCATAACAAAGGCTACAGAGGGCAAAGATGGCTTCAAGCAGTGCGAACACATTGTC
AAGCAGTGGGCTTCTTCTTCACTCGATTTGGAAGTCAAAAATGACAAACATGTCTTGCAG
AACTTGCTCTTTTTTCTTCATGTCCCCAGGACTGGAGGGCGAACATATTTTCATTGTTTT
CTTAAAAAGCTTTATGCCAGTTCTTTAGAGTGTCCACGTTCGTATGATAAGTTAAGGATT
GATCCAAGAAAACCAAAATGCCGCTTGTTGGTTACTCATGACGACTACAGCATGATGAAC
AAACTTCACAAGGATGAAACTTCTGTGGTGACAATACTTAGGAATCCAATTGACCGTGTT
TTTAGTGCCTACGAGTTTTCCGTGGAGGTAGCAGCCAGGTTCTTGGTTCACCCTAACTTA
ACATCTGCCACCAAAATGTCTGGACGGCTGCGTTCAAAAAATACAATAAGCACTCTAGAT
ATCTGGCCATGGAAGTATTTGGTCCCTTGGATGAGAGAAGATCTATTTGCTCGAAGGGAA
GCAAGAGAACAAAATGGTCATTCTGTTGTTACAAGCACTAATCCATATGATACGAAGGAG
ATGGTGATGCCTCTACATGAGTATATCAACAACCCCATTGCTCGGGATATCATTCACAAC
GGAGCCACATTTCAGGTCGCAGGACTTACAAACAACTCCTATCTGACAGAGGCACATGAC
GTTCGTCACTGTGTACTGAAGTATCAGTCTCTTGGAGATTATGTGCTTAAGGTTGCAAAG
AAGAGATTGGATGATATGTTGTATGTTGGACTCACAGAGAACCACAAAGAATCAGCCACT
ATGTTTGCAAATGTAGTTGGTACTCAGGCAATTTCACAGTTCACTGGATCAACATCACAT
GGAGATCATACTGCTAAGAACAGCTCTGAACAGGGTTCTTCACTGCTAGAATCTGATTTT
GATACAACTTATCACCATAGCAACAGCACATACCAAAAGCCCAATCAAATCTCAGCAGCT
GATCAAGGTGAAGCAACAAAGGAAAATATGACTGCAGGAAAACTCATGGATGCATATGAG
AGCTGCATTTCGAACTTAAGGAAGACCCAGTCTGAAAGACGTGTAAATTCTCTAAAGAAA
ATTGATCCAGCAAATTTTACAAAGGAGGGACGTCGTCAGGTGTCTGAAGCCCTTCTTCAG
GAGATGACATCATTAAATCACCTCGACGTGGAGCTTTATAAATATGCCCAGACGATCTTT
GCAAATCAACACAAACGCATGTTAGTGAACAAGGTTGTCACGAACCAGTTGGACAGTGGC
TTTGACGATTCATATCGTGCATTTTCTTGGGAAGCCATCTGTATTGCCGTTTCCGTGGTG
TTTGTGGCTCTATTTGCTGTCCTATTTGTAACTGCAAAAAGAAGAACATCAAAACTTAAG
TTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014222
PEP Infomation

pacid=37466389 transcript=PGSC0003DMT400020878 locus=PGSC0003DMG400008083 ID=PGSC0003DMT400020878.v4.03 annot-version=v4.03
Sequence

MRQKGHIFDGFVILVFLLSVSTITKATEGKDGFKQCEHIVKQWASSSLDLEVKNDKHVLQ
NLLFFLHVPRTGGRTYFHCFLKKLYASSLECPRSYDKLRIDPRKPKCRLLVTHDDYSMMN
KLHKDETSVVTILRNPIDRVFSAYEFSVEVAARFLVHPNLTSATKMSGRLRSKNTISTLD
IWPWKYLVPWMREDLFARREAREQNGHSVVTSTNPYDTKEMVMPLHEYINNPIARDIIHN
GATFQVAGLTNNSYLTEAHDVRHCVLKYQSLGDYVLKVAKKRLDDMLYVGLTENHKESAT
MFANVVGTQAISQFTGSTSHGDHTAKNSSEQGSSLLESDFDTTYHHSNSTYQKPNQISAA
DQGEATKENMTAGKLMDAYESCISNLRKTQSERRVNSLKKIDPANFTKEGRRQVSEALLQ
EMTSLNHLDVELYKYAQTIFANQHKRMLVNKVVTNQLDSGFDDSYRAFSWEAICIAVSVV
FVALFAVLFVTAKRRTSKLKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400020878
Transcript Infomation

pacid=37466389 locus=PGSC0003DMG400008083 ID=PGSC0003DMT400020878.v4.03 annot-version=v4.03
Sequence

ATGAGGCAGAAAGGTCATATATTTGATGGTTTTGTGATCCTGGTGTTTCTGCTCTCAGTT
TCTACCATAACAAAGGCTACAGAGGGCAAAGATGGCTTCAAGCAGTGCGAACACATTGTC
AAGCAGTGGGCTTCTTCTTCACTCGATTTGGAAGTCAAAAATGACAAACATGTCTTGCAG
AACTTGCTCTTTTTTCTTCATGTCCCCAGGACTGGAGGGCGAACATATTTTCATTGTTTT
CTTAAAAAGCTTTATGCCAGTTCTTTAGAGTGTCCACGTTCGTATGATAAGTTAAGGATT
GATCCAAGAAAACCAAAATGCCGCTTGTTGGTTACTCATGACGACTACAGCATGATGAAC
AAACTTCACAAGGATGAAACTTCTGTGGTGACAATACTTAGGAATCCAATTGACCGTGTT
TTTAGTGCCTACGAGTTTTCCGTGGAGGTAGCAGCCAGGTTCTTGGTTCACCCTAACTTA
ACATCTGCCACCAAAATGTCTGGACGGCTGCGTTCAAAAAATACAATAAGCACTCTAGAT
ATCTGGCCATGGAAGTATTTGGTCCCTTGGATGAGAGAAGATCTATTTGCTCGAAGGGAA
GCAAGAGAACAAAATGGTCATTCTGTTGTTACAAGCACTAATCCATATGATACGAAGGAG
ATGGTGATGCCTCTACATGAGTATATCAACAACCCCATTGCTCGGGATATCATTCACAAC
GGAGCCACATTTCAGGTCGCAGGACTTACAAACAACTCCTATCTGACAGAGGCACATGAC
GTTCGTCACTGTGTACTGAAGTATCAGTCTCTTGGAGATTATGTGCTTAAGGTTGCAAAG
AAGAGATTGGATGATATGTTGTATGTTGGACTCACAGAGAACCACAAAGAATCAGCCACT
ATGTTTGCAAATGTAGTTGGTACTCAGGCAATTTCACAGTTCACTGGATCAACATCACAT
GGAGATCATACTGCTAAGAACAGCTCTGAACAGGGTTCTTCACTGCTAGAATCTGATTTT
GATACAACTTATCACCATAGCAACAGCACATACCAAAAGCCCAATCAAATCTCAGCAGCT
GATCAAGGTGAAGCAACAAAGGAAAATATGACTGCAGGAAAACTCATGGATGCATATGAG
AGCTGCATTTCGAACTTAAGGAAGACCCAGTCTGAAAGACGTGTAAATTCTCTAAAGAAA
ATTGATCCAGCAAATTTTACAAAGGAGGGACGTCGTCAGGTGTCTGAAGCCCTTCTTCAG
GAGATGACATCATTAAATCACCTCGACGTGGAGCTTTATAAATATGCCCAGACGATCTTT
GCAAATCAACACAAACGCATGTTAGTGAACAAGGTTGTCACGAACCAGTTGGACAGTGGC
TTTGACGATTCATATCGTGCATTTTCTTGGGAAGCCATCTGTATTGCCGTTTCCGTGGTG
TTTGTGGCTCTATTTGCTGTCCTATTTGTAACTGCAAAAAGAAGAACATCAAAACTTAAG
TTATGA