Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020874
CDS Infomation

pacid=37466856 polypeptide=PGSC0003DMP400014218 locus=PGSC0003DMG400008081 ID=PGSC0003DMT400020874.v4.03 annot-version=v4.03
Sequence

ATGAAGGAGGTTTTGGAGAAGTGTGTAGATTCACAGCTATGGCACGCCTGTGCAGGAGGA
ATGGTGCAAATCCCTCCGGTTAACTCCAAAGTCTACTATTTTCCACAAGGGCATGCTGAG
CATACTCTAATGAATGTGGATTTCTCTGCACTACCAAGAAGTCCTGCTCTGATTCTATGC
AGGGTAGCTGCTGTGAAGTTCTTAGCGGACCCTGAAACGGACGAGGTTTATGCTAAGATT
AGGGTTGTCCCAGTTGGGAACAAGGGAAATGACTTTGATGATGATGATGACATTTTGGGT
AGTAATGAGTCAGGAACAACTGAAAAACCCAATTCGTTTGCCAAGACATTGACTCAATCG
GATGCAAATAATGGGGGTGGATTCTCTGTGCCAAGATACTGTGCAGAGACGATATTTCCT
AGGTTGGATTACACAGCTGACCCACCTGTGCAGACCGTGACAGCCAAAGATGTTCATGGT
GAAACTTGGAAGTTTAGGCACATTTATAGGGGTACTCCCAGGAGGCATTTGTTAACGACT
GGTTGGAGTAGTTTTGTGAATCAGAAGAAACTTGTTGCTGGAGATTCCATTGTGTTTTTG
AGGGGAGAAAATGGTGAACTTTATGTGGGAATTCGTAGGGCAAAACGAGGTGGTATTGGT
GGGCCTGAAGCCCCTTCTGGATGGAACTCTGGTGCAGGAAATTATGGTGGATTTTCTGCA
TTTTTGAGGGAAGAGATGAGCAAGAATGGAAATTTGAGTTCTCCTACGGGGAGCTTAAGG
GGAAAGGTAAGGGTGAGACCTGAATCAGTTGTGGAAGCTGCATATCTTGCTGCTAGTGGG
CAGCCTTTTGAAGTTGTTTATTATCCCCGTGCAAACACACCAGAATTTTGTGTTAGGGCG
TCTTCAGTGAATACTGCAATGAGGACTCAATGGTGCTCAGGGATGAGGTTTAAAATGGCT
TTTGAAACCGAGGATTCTTCTCGAATCAGTTGGTTCATGGGAACTATATCCTCCATTCAG
CTTGCTGATCCCATCCGCTGGCCCAATTCGCCATGGCGGCTTCTTCAGGTGGCATGGGAT
GAACCTGATTTATTGCAGAACGTTAAACATGTCAGCCCATGGCTTGTCGAATTGGTCTCA
AATATGCCAGTCATTCACCACTCGCCCTTTTCACCGCCAAGAAAAAAGCTGCGTCTACCA
CCAGATTTCTCTCTTGACAGCCAATTTCAGTTACCATTTTTTTCAGGCAACCCCCTCAGG
TCCAGCAGTCCTTTCTGTTGTTTATCTGACAACATCACTGCAGGCATACAGGGAGCCAGG
CATGCTCAATTTGGAGTACCTTTATTGGATCTTCACCTTAGCAACAACTTACCGTCCGGA
TTGCTACCACCAAGTTTCCAGCGTGTTGCAGCCAACTCACAACTTCCTAATGTCATCAAT
AAGTACCAAAATGACAGAAATGATAACATCTCTTGTTTGCTTACCATGGGTACTTCAAGT
AAGACATTGGAGAAAAATGATAGTGTGAATACACCTCGGTTCTTACTCTTCGGTCAGCCA
ATTCTGACTGAGCAACAAATCTCTAACGGATGTTCTGTCACTGCTCCGCAAGTTGTCCAA
ACAGGGAAGGACTTAGGCAGGATACAACTGATCAACGAAAAACATCCTCCTGAGCAGAAA
GGCAGCATTCAAGACAATCTAACCAGTGCGACATTTTTCTGGAATCGAGGTTATCATGCA
GCTGAACTTGGTGTACTCGATACTGGTCACTGCAAAGTATTCCTCGAGTCAGAGGATGTT
GGCCGTACACTTGATCTGTCAGTTATGGGATCATATGAAGAACTGTACAGAAGACTTGCA
AAGATGTTTGGACTAGAAAGACCAGATATGCTGACCCGTGTGCTCTATCATGATGCAACA
GGTGCTGTTAAACACACCGGAGATGAACCATTCAGTGACTTTGTTAAGAGTGCAAAAAGA
TTGACAATTCTGATGAACTCAAGCAGCAATATTAAAAGGAAATGGATAACTGGTCTTGCA
ACTGCTGAACGTGGTCTAGATTCTTCAAACCAGGCAGGACCTCTTAGCATCTTTGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400014218
PEP Infomation

pacid=37466856 transcript=PGSC0003DMT400020874 locus=PGSC0003DMG400008081 ID=PGSC0003DMT400020874.v4.03 annot-version=v4.03
Sequence

MKEVLEKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILC
RVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTTEKPNSFAKTLTQS
DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLTT
GWSSFVNQKKLVAGDSIVFLRGENGELYVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSA
FLREEMSKNGNLSSPTGSLRGKVRVRPESVVEAAYLAASGQPFEVVYYPRANTPEFCVRA
SSVNTAMRTQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWD
EPDLLQNVKHVSPWLVELVSNMPVIHHSPFSPPRKKLRLPPDFSLDSQFQLPFFSGNPLR
SSSPFCCLSDNITAGIQGARHAQFGVPLLDLHLSNNLPSGLLPPSFQRVAANSQLPNVIN
KYQNDRNDNISCLLTMGTSSKTLEKNDSVNTPRFLLFGQPILTEQQISNGCSVTAPQVVQ
TGKDLGRIQLINEKHPPEQKGSIQDNLTSATFFWNRGYHAAELGVLDTGHCKVFLESEDV
GRTLDLSVMGSYEELYRRLAKMFGLERPDMLTRVLYHDATGAVKHTGDEPFSDFVKSAKR
LTILMNSSSNIKRKWITGLATAERGLDSSNQAGPLSIFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400020874
Transcript Infomation

pacid=37466856 locus=PGSC0003DMG400008081 ID=PGSC0003DMT400020874.v4.03 annot-version=v4.03
Sequence

ATGAAGGAGGTTTTGGAGAAGTGTGTAGATTCACAGCTATGGCACGCCTGTGCAGGAGGA
ATGGTGCAAATCCCTCCGGTTAACTCCAAAGTCTACTATTTTCCACAAGGGCATGCTGAG
CATACTCTAATGAATGTGGATTTCTCTGCACTACCAAGAAGTCCTGCTCTGATTCTATGC
AGGGTAGCTGCTGTGAAGTTCTTAGCGGACCCTGAAACGGACGAGGTTTATGCTAAGATT
AGGGTTGTCCCAGTTGGGAACAAGGGAAATGACTTTGATGATGATGATGACATTTTGGGT
AGTAATGAGTCAGGAACAACTGAAAAACCCAATTCGTTTGCCAAGACATTGACTCAATCG
GATGCAAATAATGGGGGTGGATTCTCTGTGCCAAGATACTGTGCAGAGACGATATTTCCT
AGGTTGGATTACACAGCTGACCCACCTGTGCAGACCGTGACAGCCAAAGATGTTCATGGT
GAAACTTGGAAGTTTAGGCACATTTATAGGGGTACTCCCAGGAGGCATTTGTTAACGACT
GGTTGGAGTAGTTTTGTGAATCAGAAGAAACTTGTTGCTGGAGATTCCATTGTGTTTTTG
AGGGGAGAAAATGGTGAACTTTATGTGGGAATTCGTAGGGCAAAACGAGGTGGTATTGGT
GGGCCTGAAGCCCCTTCTGGATGGAACTCTGGTGCAGGAAATTATGGTGGATTTTCTGCA
TTTTTGAGGGAAGAGATGAGCAAGAATGGAAATTTGAGTTCTCCTACGGGGAGCTTAAGG
GGAAAGGTAAGGGTGAGACCTGAATCAGTTGTGGAAGCTGCATATCTTGCTGCTAGTGGG
CAGCCTTTTGAAGTTGTTTATTATCCCCGTGCAAACACACCAGAATTTTGTGTTAGGGCG
TCTTCAGTGAATACTGCAATGAGGACTCAATGGTGCTCAGGGATGAGGTTTAAAATGGCT
TTTGAAACCGAGGATTCTTCTCGAATCAGTTGGTTCATGGGAACTATATCCTCCATTCAG
CTTGCTGATCCCATCCGCTGGCCCAATTCGCCATGGCGGCTTCTTCAGGTGGCATGGGAT
GAACCTGATTTATTGCAGAACGTTAAACATGTCAGCCCATGGCTTGTCGAATTGGTCTCA
AATATGCCAGTCATTCACCACTCGCCCTTTTCACCGCCAAGAAAAAAGCTGCGTCTACCA
CCAGATTTCTCTCTTGACAGCCAATTTCAGTTACCATTTTTTTCAGGCAACCCCCTCAGG
TCCAGCAGTCCTTTCTGTTGTTTATCTGACAACATCACTGCAGGCATACAGGGAGCCAGG
CATGCTCAATTTGGAGTACCTTTATTGGATCTTCACCTTAGCAACAACTTACCGTCCGGA
TTGCTACCACCAAGTTTCCAGCGTGTTGCAGCCAACTCACAACTTCCTAATGTCATCAAT
AAGTACCAAAATGACAGAAATGATAACATCTCTTGTTTGCTTACCATGGGTACTTCAAGT
AAGACATTGGAGAAAAATGATAGTGTGAATACACCTCGGTTCTTACTCTTCGGTCAGCCA
ATTCTGACTGAGCAACAAATCTCTAACGGATGTTCTGTCACTGCTCCGCAAGTTGTCCAA
ACAGGGAAGGACTTAGGCAGGATACAACTGATCAACGAAAAACATCCTCCTGAGCAGAAA
GGCAGCATTCAAGACAATCTAACCAGTGCGACATTTTTCTGGAATCGAGGTTATCATGCA
GCTGAACTTGGTGTACTCGATACTGGTCACTGCAAAGTATTCCTCGAGTCAGAGGATGTT
GGCCGTACACTTGATCTGTCAGTTATGGGATCATATGAAGAACTGTACAGAAGACTTGCA
AAGATGTTTGGACTAGAAAGACCAGATATGCTGACCCGTGTGCTCTATCATGATGCAACA
GGTGCTGTTAAACACACCGGAGATGAACCATTCAGTGACTTTGTTAAGAGTGCAAAAAGA
TTGACAATTCTGATGAACTCAAGCAGCAATATTAAAAGGAAATGGATAACTGGTCTTGCA
ACTGCTGAACGTGGTCTAGATTCTTCAAACCAGGCAGGACCTCTTAGCATCTTTGCATAG