Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020842
CDS Infomation

pacid=37466264 polypeptide=PGSC0003DMP400014197 locus=PGSC0003DMG400008066 ID=PGSC0003DMT400020842.v4.03 annot-version=v4.03
Sequence

ATGAGTGCCGGCGCTGGCGGAGGAGGAGAACGGAGCTCGCCTGCACCTAAACCCTCAAAG
TTCGCGGTGTATCAGAATCCAGCCTTTTCTGCTGCCCTAACAACGAACAGCCTTCGTCCT
TCCAAGTCCACTTTCGTTTTCATATTCATTATTTCCATTGCTTCTGCTTCTACTCTTCTC
AGGAGTTTTTCTAGGGAAAGCGGGATTGCCGACAGCCTGAAATTCAGATATGTTTCTCAA
GAAACTGCTTGTCTTATTGTCAGACTCATACAGACTTTTGCAGCCATCGTCTTGTTTGGA
ACCTTTCTCGCCCTTGTCAAGGCTATTTATTTATGTACAACGAAGACTGCTGATGTGTCA
ATTATGTCACCTACCAAAGGAACAAAGGAGAATACACGTCTGACTAATCGACAATTAGGG
CTTTTAGGGATTAAAACAAATGTTGAGCAAACTACCATGGACTCTTCGACGAGACCTCCC
AAATCAAGAGGTATCTCAGCCTCTCCTTCAAATGTCCTAGTCCCCATTCATCAGCCAATT
TCTAGTTCAAACCATTCATCTAGACTTAGTAGTGACAAAGTTAGAACTGGTAGTGGAACT
AAAATACCATCTTTTGGCACCCCATCAAAATCACCAGCTTCCCCATCCTTATATCTTGTT
TCAGCATCTTCTTCTCAATCACCTTCAATCCAATCTTCACCAGGTGGGGAATTGGTTGCC
ACCCCTTGGTCGAACAAGAGAGCTACTTTTCATAAAGAGATTGCAACAGAGGAACAGCTT
GAAAGGTTCCTGGCTGATGTTGATGAGAGAATTACTGAATCAGCAAGCAAGTTGGCAACT
CCACCGCCCACCATAAGTGGGTTTGGTGTAGTCAGTCCTGGTAACCTGCCCAGCTCCACT
AATACATCTGGAACTCCAAGAAGTACTCCTCTAAGGCCTGTTAGGATGTCCCCTGGTTCC
CAGAAGTTCTCAACTCCACCAAAGAGAGGGGAAGGCGATCTACCGCCTCCAATGTCAATG
GAAGAGTCCATTGAAGCATTTGGACATCTGGGGATCTATCCACAGATCGAGCAGTGGCGT
GACCGACTCAGGCAATGGTTTTCATCCATGCTGCTAAAGCCTTTGCTTAACAAAATTGAT
ACTAGTCACACGAAGGTTATGCAAGCTGCCAGCAAGCTAGGCATTACAATCACAGTTAGT
CAAGTTGGAAATGGAACACCTGATACTGGGACTGCTGCTATATCTGCTACTGAGATGACT
AATGAATGGAAACCCTCATTTTCTGTTGACGAAGACGGTGTACTTCACCAATTGCGCGTT
ACTCTTGTCCAGGCTCTTGATTCTTGCATGTCAAAGTCAACTTCTGGAGTTCTTCAACTA
TCCTCGCCAGAGAACCCCCTGATCCCTATTTTACAAGAATGCATTGATGCCATCACTGAA
CACCAAAGACTTCATTCCTTAATGAAAGGAGAATGGGGCAAGGGATTGCTGCCACAAAGC
GGTGTCCGTGCAGAATATACAGTACAGAGGATTCGAGAGCTTTCTGAGGGAACCTGTTTG
AGGAACTATGATTATTTGGGCAGTGTAGAGGGTTATGGGAAAGGAAACAAGAAATGGAAT
CCCGAGCTTCCAACTGATTCTCATTTGCTCCTATATTTGTTTTGTGCTTTCCTGGAGCAC
CCAAAGTGGATGCTACATGTTGATCCTACAACTTATGCTGGAATCCAGTCTAGCAAAAAT
CCCTTATTTTTGGGTGTGTTACCTCCTAAAGAAAGGTTTCCTGAAAAGTATGTAGCTGTT
GTGTCAGGTGTTCCCTGTGTGCTCCATCCAGGAGCTTGCATATTGGCTGTCGGAAAGCAA
AATCCCCCAGTTTTTGCCCTATACTGGGATAAGATGCCTCAGTTTTCTCTCCAGGGACGA
ACAGCACTCTGGGATTCAATCTTGCTGCTGTGCTATAAAATTAAGACCGGGTATGGAGGA
TTAGTGCGGGGTATGCATCTTTCTTCATCAGCATTGGGCATTCTACCAGTTCTTGATTCA
GAAAAGGACGACCGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014197
PEP Infomation

pacid=37466264 transcript=PGSC0003DMT400020842 locus=PGSC0003DMG400008066 ID=PGSC0003DMT400020842.v4.03 annot-version=v4.03
Sequence

MSAGAGGGGERSSPAPKPSKFAVYQNPAFSAALTTNSLRPSKSTFVFIFIISIASASTLL
RSFSRESGIADSLKFRYVSQETACLIVRLIQTFAAIVLFGTFLALVKAIYLCTTKTADVS
IMSPTKGTKENTRLTNRQLGLLGIKTNVEQTTMDSSTRPPKSRGISASPSNVLVPIHQPI
SSSNHSSRLSSDKVRTGSGTKIPSFGTPSKSPASPSLYLVSASSSQSPSIQSSPGGELVA
TPWSNKRATFHKEIATEEQLERFLADVDERITESASKLATPPPTISGFGVVSPGNLPSST
NTSGTPRSTPLRPVRMSPGSQKFSTPPKRGEGDLPPPMSMEESIEAFGHLGIYPQIEQWR
DRLRQWFSSMLLKPLLNKIDTSHTKVMQAASKLGITITVSQVGNGTPDTGTAAISATEMT
NEWKPSFSVDEDGVLHQLRVTLVQALDSCMSKSTSGVLQLSSPENPLIPILQECIDAITE
HQRLHSLMKGEWGKGLLPQSGVRAEYTVQRIRELSEGTCLRNYDYLGSVEGYGKGNKKWN
PELPTDSHLLLYLFCAFLEHPKWMLHVDPTTYAGIQSSKNPLFLGVLPPKERFPEKYVAV
VSGVPCVLHPGACILAVGKQNPPVFALYWDKMPQFSLQGRTALWDSILLLCYKIKTGYGG
LVRGMHLSSSALGILPVLDSEKDDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400020842
Transcript Infomation

pacid=37466264 locus=PGSC0003DMG400008066 ID=PGSC0003DMT400020842.v4.03 annot-version=v4.03
Sequence

ATGAGTGCCGGCGCTGGCGGAGGAGGAGAACGGAGCTCGCCTGCACCTAAACCCTCAAAG
TTCGCGGTGTATCAGAATCCAGCCTTTTCTGCTGCCCTAACAACGAACAGCCTTCGTCCT
TCCAAGTCCACTTTCGTTTTCATATTCATTATTTCCATTGCTTCTGCTTCTACTCTTCTC
AGGAGTTTTTCTAGGGAAAGCGGGATTGCCGACAGCCTGAAATTCAGATATGTTTCTCAA
GAAACTGCTTGTCTTATTGTCAGACTCATACAGACTTTTGCAGCCATCGTCTTGTTTGGA
ACCTTTCTCGCCCTTGTCAAGGCTATTTATTTATGTACAACGAAGACTGCTGATGTGTCA
ATTATGTCACCTACCAAAGGAACAAAGGAGAATACACGTCTGACTAATCGACAATTAGGG
CTTTTAGGGATTAAAACAAATGTTGAGCAAACTACCATGGACTCTTCGACGAGACCTCCC
AAATCAAGAGGTATCTCAGCCTCTCCTTCAAATGTCCTAGTCCCCATTCATCAGCCAATT
TCTAGTTCAAACCATTCATCTAGACTTAGTAGTGACAAAGTTAGAACTGGTAGTGGAACT
AAAATACCATCTTTTGGCACCCCATCAAAATCACCAGCTTCCCCATCCTTATATCTTGTT
TCAGCATCTTCTTCTCAATCACCTTCAATCCAATCTTCACCAGGTGGGGAATTGGTTGCC
ACCCCTTGGTCGAACAAGAGAGCTACTTTTCATAAAGAGATTGCAACAGAGGAACAGCTT
GAAAGGTTCCTGGCTGATGTTGATGAGAGAATTACTGAATCAGCAAGCAAGTTGGCAACT
CCACCGCCCACCATAAGTGGGTTTGGTGTAGTCAGTCCTGGTAACCTGCCCAGCTCCACT
AATACATCTGGAACTCCAAGAAGTACTCCTCTAAGGCCTGTTAGGATGTCCCCTGGTTCC
CAGAAGTTCTCAACTCCACCAAAGAGAGGGGAAGGCGATCTACCGCCTCCAATGTCAATG
GAAGAGTCCATTGAAGCATTTGGACATCTGGGGATCTATCCACAGATCGAGCAGTGGCGT
GACCGACTCAGGCAATGGTTTTCATCCATGCTGCTAAAGCCTTTGCTTAACAAAATTGAT
ACTAGTCACACGAAGGTTATGCAAGCTGCCAGCAAGCTAGGCATTACAATCACAGTTAGT
CAAGTTGGAAATGGAACACCTGATACTGGGACTGCTGCTATATCTGCTACTGAGATGACT
AATGAATGGAAACCCTCATTTTCTGTTGACGAAGACGGTGTACTTCACCAATTGCGCGTT
ACTCTTGTCCAGGCTCTTGATTCTTGCATGTCAAAGTCAACTTCTGGAGTTCTTCAACTA
TCCTCGCCAGAGAACCCCCTGATCCCTATTTTACAAGAATGCATTGATGCCATCACTGAA
CACCAAAGACTTCATTCCTTAATGAAAGGAGAATGGGGCAAGGGATTGCTGCCACAAAGC
GGTGTCCGTGCAGAATATACAGTACAGAGGATTCGAGAGCTTTCTGAGGGAACCTGTTTG
AGGAACTATGATTATTTGGGCAGTGTAGAGGGTTATGGGAAAGGAAACAAGAAATGGAAT
CCCGAGCTTCCAACTGATTCTCATTTGCTCCTATATTTGTTTTGTGCTTTCCTGGAGCAC
CCAAAGTGGATGCTACATGTTGATCCTACAACTTATGCTGGAATCCAGTCTAGCAAAAAT
CCCTTATTTTTGGGTGTGTTACCTCCTAAAGAAAGGTTTCCTGAAAAGTATGTAGCTGTT
GTGTCAGGTGTTCCCTGTGTGCTCCATCCAGGAGCTTGCATATTGGCTGTCGGAAAGCAA
AATCCCCCAGTTTTTGCCCTATACTGGGATAAGATGCCTCAGTTTTCTCTCCAGGGACGA
ACAGCACTCTGGGATTCAATCTTGCTGCTGTGCTATAAAATTAAGACCGGGTATGGAGGA
TTAGTGCGGGGTATGCATCTTTCTTCATCAGCATTGGGCATTCTACCAGTTCTTGATTCA
GAAAAGGACGACCGCTGA