Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020839
CDS Infomation

pacid=37465464 polypeptide=PGSC0003DMP400014194 locus=PGSC0003DMG400008065 ID=PGSC0003DMT400020839.v4.03 annot-version=v4.03
Sequence

ATGGAATTTGATCTGAATCATGCATTAGTGAGTGAAGTGGAGAAGAATGTATGTTGTAAT
GAAGAATGTGATAAAGGGGGTGGTGGGGGTTGTGTTAATTGCTCTTTGTACACTTCCACT
ACTTCTTCTTGTTCTTCAAATGTATCTTCATCTTCTTCACTTGCTCTTACCTCAATTTAC
AAGGAGCTTTGGCATGCTTGTGCTGGACCTCTTACTAGTTTACCCAAGAAAGGAAATGTA
GTGGTTTATTTCCCTCAAGGTCATATGGAGGAAGCTGTTTCTGCTTTTCCATTTTCACCT
ATCAAGATTGATTTCCCAACTTTTGGTCTTCAGCCTCAGATCTTCTGTAGAGTGGAAGAT
GTCCAGTTGCTTGCAAATAAGGAAAATGATGAGGTGTATACACAGCTCACTCTTCTACCT
CTTCCAGAGTCAATGGCTATAAGCTTAGAGGGGAAAGAACATGAAGATTCGGGGACGGAT
GAGGAAGGGAATGGAGTTAATCCAGGGAAATCAGCTTCTCATATGTTCTGTAAAACGCTG
ACTGCTTCGGATACCAGCACCCATGGTGGCTTTTCGGTTCCCCGTCGGGCAGCTGAAGAC
TGTTTCCCCCCTCTGGATTACAAAGAGCAAAGACCCTCTCAGGAGCTGATTGCTAAGGAT
CTGCACGGAGTAGAGTGGAAATTTCGTCACATTTATAGAGGCCAGCCAAGGCGACATTTG
CTCACTACTGGATGGAGTATTTTTGTCAGCCAAAAGAATCTTGTCTCAGGAGATGCAGTT
CTCTTCTTGAGGGGAGAAGGTGGAGATCTCAGACTGGGAATAAGAAGAGCTGCAAGACCT
AGAAATGGGCTTCCTGAATCGATAATCAAAAGTCAATACTCTGGACCGGATGTTCTTTCA
TCAGTTGCTTCCGCCCTATCCGCAAAGAGCACTTTCCATGTTTTCTATAGCCCAAGGGCA
AGTCATGCTGATTTCGTTGTACCTTACCAAAAGTACGTGAAAGCCATCAACACTCGGATT
CCTGTTGGGACAAGATTTAAAATGAAATTTGATTTGGATGATTCACCTGAAAGAAGGTAC
AGCGGTGTAGTGACTGGGATAAGCGATATGGATCCCTTTAGATGGCCCAACTCTAAATGG
AGATGCTTGATGGTCAGATGGGATGAAGATATAATGAGTAATCATCAGGAACGGGTTTCT
CCTTGGGAAATTGATTCTTCAGTTTCCTTACCACCACTGAGCATTCAGTCCTCACCAAGA
CTGAAGAAACTGCGGACTAGTCAGCAGGCACCATCAGTACTGGACGGCCATTTTGCTGGA
GGGAGTGCTCTTTTAGACTTTGAGGAGTCAATAAGATCCTCCAAGGTCTTGCAAGGTCAA
GAAAATTTAGGTCTGATATCACCTCCCTATGGTTGTGATAAACCAGTCCGCCCACTGGAT
TTCGAGCTGCAAAGAGTAGCTCGTCATAATCTCATGCCAAATGGTGTAGAGAACATAATT
GTTGGTGACTTTGTGAAAACTCAGCCTCCAACTACCTACACAGGCTTTCTGGAATCCAAT
AGGTTTCCAAAGGTCTTGCAAGGTCAAGAAATTTGCTCGTTAAGATCCCTTACTGGAAAA
GGTGATGTTAATTTTGGTGCTTGGGGAAAACCTGAATTTGGTTGCAATGTTTTCGGCACA
TATCAGAGGCCGAGAGCCAATTTCTATCCTCTCGCTTCTGAAGGGGCGAGGAATGTGTTT
TTACCTTACAATGCGATGTATAGAGCTGGACAAGATCCCGTGGTTCCCTCCTACATAACT
ACTTTCCAAAGAGAAAATCCTACCTTGAACCAGAATTCAATCCAAAATGTGGTTAGGAGG
GAAGAAGTTGGAATGCCGAAGTTTGTAAATGAGCAGAGGCCACCGGAGATGTCTAAAGTA
TCCATTCCAGAGAATCATTTCAAGAATGAAAATGACGGCTCCTTCAATGCACAGGCTTCA
TGTAAACTGTTTGGCTTTTCCTTGACGAAAGAACCATCTACTCCTAGCTCGCAGAGTTCT
GGTAAGAGGAGCTGTACAAAGGTTCACAAACAAGGCAGCTTGGTTGGACGAGCCATTGAT
CTCTCGAGATTGAATGGCTATGACGACTTGCTGGTTGAGTTGGAGAGGCTTTTCAACATG
GAAGACCTCCTAAGAGATCCCAACAAGGGGTGGCGAATCTTGTACACTGACAGTGAGAAT
GACATGATGGTTGTCGGAGATGATCCATGGCATGAGTTCTGCGAGGTAGTATCGAAGATC
CATATATACACTCAAGAAGAAGTGGAGAAAATGACTATTGAGGGGATCAGTGATGACACT
CAAAGTTGTTTGGAGGAGGCACCAGCAATCATGGATGTCTCAAAGTCTTCTTCAGTTGGC
CAGCCTGATTCTTCTCCAACTGTAATCAGGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014194
PEP Infomation

pacid=37465464 transcript=PGSC0003DMT400020839 locus=PGSC0003DMG400008065 ID=PGSC0003DMT400020839.v4.03 annot-version=v4.03
Sequence

MEFDLNHALVSEVEKNVCCNEECDKGGGGGCVNCSLYTSTTSSCSSNVSSSSSLALTSIY
KELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPIKIDFPTFGLQPQIFCRVED
VQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCKTL
TASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL
LTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNGLPESIIKSQYSGPDVLS
SVASALSAKSTFHVFYSPRASHADFVVPYQKYVKAINTRIPVGTRFKMKFDLDDSPERRY
SGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLPPLSIQSSPR
LKKLRTSQQAPSVLDGHFAGGSALLDFEESIRSSKVLQGQENLGLISPPYGCDKPVRPLD
FELQRVARHNLMPNGVENIIVGDFVKTQPPTTYTGFLESNRFPKVLQGQEICSLRSLTGK
GDVNFGAWGKPEFGCNVFGTYQRPRANFYPLASEGARNVFLPYNAMYRAGQDPVVPSYIT
TFQRENPTLNQNSIQNVVRREEVGMPKFVNEQRPPEMSKVSIPENHFKNENDGSFNAQAS
CKLFGFSLTKEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNM
EDLLRDPNKGWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDT
QSCLEEAPAIMDVSKSSSVGQPDSSPTVIRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400020839
Transcript Infomation

pacid=37465464 locus=PGSC0003DMG400008065 ID=PGSC0003DMT400020839.v4.03 annot-version=v4.03
Sequence

ATGGAATTTGATCTGAATCATGCATTAGTGAGTGAAGTGGAGAAGAATGTATGTTGTAAT
GAAGAATGTGATAAAGGGGGTGGTGGGGGTTGTGTTAATTGCTCTTTGTACACTTCCACT
ACTTCTTCTTGTTCTTCAAATGTATCTTCATCTTCTTCACTTGCTCTTACCTCAATTTAC
AAGGAGCTTTGGCATGCTTGTGCTGGACCTCTTACTAGTTTACCCAAGAAAGGAAATGTA
GTGGTTTATTTCCCTCAAGGTCATATGGAGGAAGCTGTTTCTGCTTTTCCATTTTCACCT
ATCAAGATTGATTTCCCAACTTTTGGTCTTCAGCCTCAGATCTTCTGTAGAGTGGAAGAT
GTCCAGTTGCTTGCAAATAAGGAAAATGATGAGGTGTATACACAGCTCACTCTTCTACCT
CTTCCAGAGTCAATGGCTATAAGCTTAGAGGGGAAAGAACATGAAGATTCGGGGACGGAT
GAGGAAGGGAATGGAGTTAATCCAGGGAAATCAGCTTCTCATATGTTCTGTAAAACGCTG
ACTGCTTCGGATACCAGCACCCATGGTGGCTTTTCGGTTCCCCGTCGGGCAGCTGAAGAC
TGTTTCCCCCCTCTGGATTACAAAGAGCAAAGACCCTCTCAGGAGCTGATTGCTAAGGAT
CTGCACGGAGTAGAGTGGAAATTTCGTCACATTTATAGAGGCCAGCCAAGGCGACATTTG
CTCACTACTGGATGGAGTATTTTTGTCAGCCAAAAGAATCTTGTCTCAGGAGATGCAGTT
CTCTTCTTGAGGGGAGAAGGTGGAGATCTCAGACTGGGAATAAGAAGAGCTGCAAGACCT
AGAAATGGGCTTCCTGAATCGATAATCAAAAGTCAATACTCTGGACCGGATGTTCTTTCA
TCAGTTGCTTCCGCCCTATCCGCAAAGAGCACTTTCCATGTTTTCTATAGCCCAAGGGCA
AGTCATGCTGATTTCGTTGTACCTTACCAAAAGTACGTGAAAGCCATCAACACTCGGATT
CCTGTTGGGACAAGATTTAAAATGAAATTTGATTTGGATGATTCACCTGAAAGAAGGTAC
AGCGGTGTAGTGACTGGGATAAGCGATATGGATCCCTTTAGATGGCCCAACTCTAAATGG
AGATGCTTGATGGTCAGATGGGATGAAGATATAATGAGTAATCATCAGGAACGGGTTTCT
CCTTGGGAAATTGATTCTTCAGTTTCCTTACCACCACTGAGCATTCAGTCCTCACCAAGA
CTGAAGAAACTGCGGACTAGTCAGCAGGCACCATCAGTACTGGACGGCCATTTTGCTGGA
GGGAGTGCTCTTTTAGACTTTGAGGAGTCAATAAGATCCTCCAAGGTCTTGCAAGGTCAA
GAAAATTTAGGTCTGATATCACCTCCCTATGGTTGTGATAAACCAGTCCGCCCACTGGAT
TTCGAGCTGCAAAGAGTAGCTCGTCATAATCTCATGCCAAATGGTGTAGAGAACATAATT
GTTGGTGACTTTGTGAAAACTCAGCCTCCAACTACCTACACAGGCTTTCTGGAATCCAAT
AGGTTTCCAAAGGTCTTGCAAGGTCAAGAAATTTGCTCGTTAAGATCCCTTACTGGAAAA
GGTGATGTTAATTTTGGTGCTTGGGGAAAACCTGAATTTGGTTGCAATGTTTTCGGCACA
TATCAGAGGCCGAGAGCCAATTTCTATCCTCTCGCTTCTGAAGGGGCGAGGAATGTGTTT
TTACCTTACAATGCGATGTATAGAGCTGGACAAGATCCCGTGGTTCCCTCCTACATAACT
ACTTTCCAAAGAGAAAATCCTACCTTGAACCAGAATTCAATCCAAAATGTGGTTAGGAGG
GAAGAAGTTGGAATGCCGAAGTTTGTAAATGAGCAGAGGCCACCGGAGATGTCTAAAGTA
TCCATTCCAGAGAATCATTTCAAGAATGAAAATGACGGCTCCTTCAATGCACAGGCTTCA
TGTAAACTGTTTGGCTTTTCCTTGACGAAAGAACCATCTACTCCTAGCTCGCAGAGTTCT
GGTAAGAGGAGCTGTACAAAGGTTCACAAACAAGGCAGCTTGGTTGGACGAGCCATTGAT
CTCTCGAGATTGAATGGCTATGACGACTTGCTGGTTGAGTTGGAGAGGCTTTTCAACATG
GAAGACCTCCTAAGAGATCCCAACAAGGGGTGGCGAATCTTGTACACTGACAGTGAGAAT
GACATGATGGTTGTCGGAGATGATCCATGGCATGAGTTCTGCGAGGTAGTATCGAAGATC
CATATATACACTCAAGAAGAAGTGGAGAAAATGACTATTGAGGGGATCAGTGATGACACT
CAAAGTTGTTTGGAGGAGGCACCAGCAATCATGGATGTCTCAAAGTCTTCTTCAGTTGGC
CAGCCTGATTCTTCTCCAACTGTAATCAGGATTTGA