Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020806
CDS Infomation

pacid=37465964 polypeptide=PGSC0003DMP400014171 locus=PGSC0003DMG401008054 ID=PGSC0003DMT400020806.v4.03 annot-version=v4.03
Sequence

ATGTTGCTGATAGTTTCTTTTTGTGTGTGGCATCAATTTTCCCCCCACCTCACCAAGGTT
TGTGAAAGATCCCTATCTGGTAATGGGCCTGGCCCAAATCCTGCTGCTGCTTCCCAGTTT
GTAAGAGCTCAAATGCTTCCATCTGGATATCTGATTCGACCGTGTGACGGTGGAGGATCA
ATCATACATATTGTTGACCACCTGAATCTTGAGGCATGGAGTGCCCCTGAGATTTTGCGT
CCACTCTATGAATCGTCAAAAGTTGTTGCACAGAAAATGACTATTGCAGCACTGCGCTAT
GCAAGGCAATTAGCGCAAGAGACTAGCGGCGAGGTAGTATATGGTCTAGGAAGGCAACCT
GCTGTTCTTCGAACATTTAGCCAGAGATTATGCAGAGGGTTCAATGATGCCATTAATGGA
TTCGGCGACGATGGCTGGTCAATGTTAAGTTCAGATGGTGCTGAAGATGTCATAGTTGCT
GTCAATTCAAGGAAGAACCTCGCCACCACCTCCGTTCCTCTTTCGTCCCTTGGAGGCATC
CTTTGTGCCAAAGCATCAATGCTACTCCAGAATGTTCCTCCTGCAGTACTGGTTCGGTTT
CTGAGGGAGCACCGTTCAGAGTGGGCGGACTTTAATGTTGATGCTTTTGTAGCTTCTGCA
TTGAAATCTTGTCCGTATACATATCCTGGGATGAGGCCTACCAGATTTACCGGAAGCCAG
ATAATAATGCCACTTGGCCACACAATTGAGCATGAAGAAATGCTTGAAGTTATTAGACTC
GAAGGGCACTCTATTGGACAGGAAGATGCTTTTATGCCAAGAGATATTCACCTTTTACAG
ATGTGTAGTGGCACTGATGAGAATGCAGTTGGAGCCTGTTCTGAACTTGTTTTTGCCCCT
ATTGATGAGATGTTTCCAGATGATGCACCTTTGCTCCCCTCCGGGTTTCGCATTATTCCT
CTCGAATCAAAATCAGGTGATGCCCAGGATACATTGAACGCACATAGAACATTAGATCTA
GCATCAAGTCTCGAAGTGGGCCCAGCAAGGAACTCGGCTACCGGAGATATGGCCTCTTGT
TACAGTGCACGATCTGTACTGACAATCGCTTTCCAATTTCCATTTGAGGACAATCTTCAG
GACAATGTGGCTACCATGGCCCGACAGTATGTTCGCAGTGTGGTTTCGTCTGTCCAACGA
GTTGCCATGGCAATATCTCCTACAGGAATGAATCCAACACTGGGGGCCAAGCTTTCTCCA
GGCTCACCAGAAGCTGTAACATTGTCGCATTGGATCTGCCAGAGCTATAGTTATCACATG
GGAACAGAGTTACTTCGAGCTGATTCTAGTGGCGATGAATCAGTACTAAAGAATCTCTGG
CAACACCAGGATGCTATTTTATGCTGCTCATTGAAGTCGCTTCCAGTTTTCATTTTTGCT
AATAAGGCCGGACTTGACATGCTGGAGACAACATTAGTTGCATTACAGGACATTTCTCTA
GATAAGATATTCGATGAACCCGGAAGGGAAGTGTTGCTCTCAGAATTTGCCAAGATCATG
GAACAGGGTTTCGCGTGTTTGCCGGGTGGTATCTGCATGTCAACAATGGGACGACATATT
TCATATGAACAAGCTATTGCATGGAAAGTCTTTGCTTCGTCTGAAGAAAACGCTGTCCAC
TGCTTGGCCTTTTCATTTATTAACTGGTCATTCGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014171
PEP Infomation

pacid=37465964 transcript=PGSC0003DMT400020806 locus=PGSC0003DMG401008054 ID=PGSC0003DMT400020806.v4.03 annot-version=v4.03
Sequence

MLLIVSFCVWHQFSPHLTKVCERSLSGNGPGPNPAAASQFVRAQMLPSGYLIRPCDGGGS
IIHIVDHLNLEAWSAPEILRPLYESSKVVAQKMTIAALRYARQLAQETSGEVVYGLGRQP
AVLRTFSQRLCRGFNDAINGFGDDGWSMLSSDGAEDVIVAVNSRKNLATTSVPLSSLGGI
LCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAFVASALKSCPYTYPGMRPTRFTGSQ
IIMPLGHTIEHEEMLEVIRLEGHSIGQEDAFMPRDIHLLQMCSGTDENAVGACSELVFAP
IDEMFPDDAPLLPSGFRIIPLESKSGDAQDTLNAHRTLDLASSLEVGPARNSATGDMASC
YSARSVLTIAFQFPFEDNLQDNVATMARQYVRSVVSSVQRVAMAISPTGMNPTLGAKLSP
GSPEAVTLSHWICQSYSYHMGTELLRADSSGDESVLKNLWQHQDAILCCSLKSLPVFIFA
NKAGLDMLETTLVALQDISLDKIFDEPGREVLLSEFAKIMEQGFACLPGGICMSTMGRHI
SYEQAIAWKVFASSEENAVHCLAFSFINWSFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400020806
Transcript Infomation

pacid=37465964 locus=PGSC0003DMG401008054 ID=PGSC0003DMT400020806.v4.03 annot-version=v4.03
Sequence

ATGTTGCTGATAGTTTCTTTTTGTGTGTGGCATCAATTTTCCCCCCACCTCACCAAGGTT
TGTGAAAGATCCCTATCTGGTAATGGGCCTGGCCCAAATCCTGCTGCTGCTTCCCAGTTT
GTAAGAGCTCAAATGCTTCCATCTGGATATCTGATTCGACCGTGTGACGGTGGAGGATCA
ATCATACATATTGTTGACCACCTGAATCTTGAGGCATGGAGTGCCCCTGAGATTTTGCGT
CCACTCTATGAATCGTCAAAAGTTGTTGCACAGAAAATGACTATTGCAGCACTGCGCTAT
GCAAGGCAATTAGCGCAAGAGACTAGCGGCGAGGTAGTATATGGTCTAGGAAGGCAACCT
GCTGTTCTTCGAACATTTAGCCAGAGATTATGCAGAGGGTTCAATGATGCCATTAATGGA
TTCGGCGACGATGGCTGGTCAATGTTAAGTTCAGATGGTGCTGAAGATGTCATAGTTGCT
GTCAATTCAAGGAAGAACCTCGCCACCACCTCCGTTCCTCTTTCGTCCCTTGGAGGCATC
CTTTGTGCCAAAGCATCAATGCTACTCCAGAATGTTCCTCCTGCAGTACTGGTTCGGTTT
CTGAGGGAGCACCGTTCAGAGTGGGCGGACTTTAATGTTGATGCTTTTGTAGCTTCTGCA
TTGAAATCTTGTCCGTATACATATCCTGGGATGAGGCCTACCAGATTTACCGGAAGCCAG
ATAATAATGCCACTTGGCCACACAATTGAGCATGAAGAAATGCTTGAAGTTATTAGACTC
GAAGGGCACTCTATTGGACAGGAAGATGCTTTTATGCCAAGAGATATTCACCTTTTACAG
ATGTGTAGTGGCACTGATGAGAATGCAGTTGGAGCCTGTTCTGAACTTGTTTTTGCCCCT
ATTGATGAGATGTTTCCAGATGATGCACCTTTGCTCCCCTCCGGGTTTCGCATTATTCCT
CTCGAATCAAAATCAGGTGATGCCCAGGATACATTGAACGCACATAGAACATTAGATCTA
GCATCAAGTCTCGAAGTGGGCCCAGCAAGGAACTCGGCTACCGGAGATATGGCCTCTTGT
TACAGTGCACGATCTGTACTGACAATCGCTTTCCAATTTCCATTTGAGGACAATCTTCAG
GACAATGTGGCTACCATGGCCCGACAGTATGTTCGCAGTGTGGTTTCGTCTGTCCAACGA
GTTGCCATGGCAATATCTCCTACAGGAATGAATCCAACACTGGGGGCCAAGCTTTCTCCA
GGCTCACCAGAAGCTGTAACATTGTCGCATTGGATCTGCCAGAGCTATAGTTATCACATG
GGAACAGAGTTACTTCGAGCTGATTCTAGTGGCGATGAATCAGTACTAAAGAATCTCTGG
CAACACCAGGATGCTATTTTATGCTGCTCATTGAAGTCGCTTCCAGTTTTCATTTTTGCT
AATAAGGCCGGACTTGACATGCTGGAGACAACATTAGTTGCATTACAGGACATTTCTCTA
GATAAGATATTCGATGAACCCGGAAGGGAAGTGTTGCTCTCAGAATTTGCCAAGATCATG
GAACAGGGTTTCGCGTGTTTGCCGGGTGGTATCTGCATGTCAACAATGGGACGACATATT
TCATATGAACAAGCTATTGCATGGAAAGTCTTTGCTTCGTCTGAAGAAAACGCTGTCCAC
TGCTTGGCCTTTTCATTTATTAACTGGTCATTCGTGTAA