Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020747
CDS Infomation

pacid=37473898 polypeptide=PGSC0003DMP400014131 locus=PGSC0003DMG400008029 ID=PGSC0003DMT400020747.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTCAAGCAAAGAGCCGATCTCCAATCCCCCAATCCCCGACGAAGACGATGAG
GAAGAAGACGATTACGACGAAATCGATGAAGATGATGAAGAAGAAGAAGAGCGAGAGCGA
AGGCCAGTAACTGAAGAATCTCGAGTGCGTTCCGATAGGGCTAAAATGGAGAATTTATTC
CGGCGGCTGTCGTCTGAGAGAGTGCCTATAAGAGTCCATGATGTGATTATCCAAGGGAAT
ACGAAGACTAAGGAATCACTTATTGAGGCCGAAATGGAAGCCCTAAAAAATGCAACAACT
CTTCAGGAGTTGCTTAAGGCTGCCAGTATTGCAAATGCGAGACTTCAACAGCTTGATATT
TTCGATTCCGTTAAAATTACTCTGGATTCTGGTCCACCGGAGCTGCCTGGGACTACAAAT
GTGGTTGTTGAGATTGTCGAGAGTGAAAATCCACTTACTGGAAGTGTTGGAGTTTTCTCC
AAGCCTGAGGCTAGAGCTTGGTCACTTGAAGGTTCCTTGAAGCTGAAAAACTTGTTTGGT
TATGGGGATATATGGGATGGGTCTTTGGCCTATGGCTTGGACCTGACTTCAGAGGTCAGT
GCTGGTGTGTCTCTCCCCAGATTCAAAAAATTGATCACCCCTGTGACAGCTCGATTATTT
CTTCTTTCCCAAGATTGGCTGAAGTTCTCCTCATATAAAGAACGAGCGTTGGGACTTTCT
CTTGGCCTACTGTCATCCAGAAGGCATGATTTGTCCTACAGTCTCGCTTGGCGAACCTTG
GCTGACCCATCTCAAATGTCATCAAGAGCAGTGAGGAGACAGCTTGGGCATAGCTTAATT
TCGGCTCTGAAGTATACATTCAAAATTGATAGGAGAAATTCTCCTTTAAGACCAACCCGA
GGATATGCCTTTCTGTCGTCTTCTCAAATTGGTGGCGTCTTACCAGATCATCGGGGGTTA
CGCTTTCTCCGTCAGGAGTTGGACTTCCGCTATGCTTTACCTCTGGGATTTTATAATGCT
GCTTTCAACATTGGAATTTCCGCTGGTGTAACTGTTCCATGGGGAAGTGGGTTCTTAAGT
CATCCCACCTATTTACCTGAGAAATTTTTCCTGGGTGGTAATTCTTCTCCAGTTTGTGCA
CTGGGTGGCCCATCATCTTTGTTGGGCTTTAAGACCAGGGGATTGGGCCCTGCTGAACCT
AGAAGGCAAGTTACAGAAAATTCCACTGATGAGAGCTCTGATGCATCTTCTGCAATGGAT
TTCGTGGGAGGAGACCTTGCGGTTACTGCTTTTGCAGACCTTTCTTTTGATCTACCACTG
CGGGTATTGAGAGAAGCTGGGATTCATGGCCATGCTTTTGCTTGTACCGGAAGCCTGAAT
AAATTGACGGAAAATGCGTATAAAGATCTATCTTTACAGAAATTCAAAGAATCATTCCGA
GCGTCGGCCGGATTTGGTGTCATTGTACCGACCAAGCTCTTCCGAATGGAGGTTAATTAC
TGCTATATACTGAAGCAGCAAGAGCATGACCGAGGGAAGACTGGTGTGCAGTTCAGCTTC
TCCTCATCTTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014131
PEP Infomation

pacid=37473898 transcript=PGSC0003DMT400020747 locus=PGSC0003DMG400008029 ID=PGSC0003DMT400020747.v4.03 annot-version=v4.03
Sequence

MASSSKEPISNPPIPDEDDEEEDDYDEIDEDDEEEEERERRPVTEESRVRSDRAKMENLF
RRLSSERVPIRVHDVIIQGNTKTKESLIEAEMEALKNATTLQELLKAASIANARLQQLDI
FDSVKITLDSGPPELPGTTNVVVEIVESENPLTGSVGVFSKPEARAWSLEGSLKLKNLFG
YGDIWDGSLAYGLDLTSEVSAGVSLPRFKKLITPVTARLFLLSQDWLKFSSYKERALGLS
LGLLSSRRHDLSYSLAWRTLADPSQMSSRAVRRQLGHSLISALKYTFKIDRRNSPLRPTR
GYAFLSSSQIGGVLPDHRGLRFLRQELDFRYALPLGFYNAAFNIGISAGVTVPWGSGFLS
HPTYLPEKFFLGGNSSPVCALGGPSSLLGFKTRGLGPAEPRRQVTENSTDESSDASSAMD
FVGGDLAVTAFADLSFDLPLRVLREAGIHGHAFACTGSLNKLTENAYKDLSLQKFKESFR
ASAGFGVIVPTKLFRMEVNYCYILKQQEHDRGKTGVQFSFSSSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400020747
Transcript Infomation

pacid=37473898 locus=PGSC0003DMG400008029 ID=PGSC0003DMT400020747.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTCAAGCAAAGAGCCGATCTCCAATCCCCCAATCCCCGACGAAGACGATGAG
GAAGAAGACGATTACGACGAAATCGATGAAGATGATGAAGAAGAAGAAGAGCGAGAGCGA
AGGCCAGTAACTGAAGAATCTCGAGTGCGTTCCGATAGGGCTAAAATGGAGAATTTATTC
CGGCGGCTGTCGTCTGAGAGAGTGCCTATAAGAGTCCATGATGTGATTATCCAAGGGAAT
ACGAAGACTAAGGAATCACTTATTGAGGCCGAAATGGAAGCCCTAAAAAATGCAACAACT
CTTCAGGAGTTGCTTAAGGCTGCCAGTATTGCAAATGCGAGACTTCAACAGCTTGATATT
TTCGATTCCGTTAAAATTACTCTGGATTCTGGTCCACCGGAGCTGCCTGGGACTACAAAT
GTGGTTGTTGAGATTGTCGAGAGTGAAAATCCACTTACTGGAAGTGTTGGAGTTTTCTCC
AAGCCTGAGGCTAGAGCTTGGTCACTTGAAGGTTCCTTGAAGCTGAAAAACTTGTTTGGT
TATGGGGATATATGGGATGGGTCTTTGGCCTATGGCTTGGACCTGACTTCAGAGGTCAGT
GCTGGTGTGTCTCTCCCCAGATTCAAAAAATTGATCACCCCTGTGACAGCTCGATTATTT
CTTCTTTCCCAAGATTGGCTGAAGTTCTCCTCATATAAAGAACGAGCGTTGGGACTTTCT
CTTGGCCTACTGTCATCCAGAAGGCATGATTTGTCCTACAGTCTCGCTTGGCGAACCTTG
GCTGACCCATCTCAAATGTCATCAAGAGCAGTGAGGAGACAGCTTGGGCATAGCTTAATT
TCGGCTCTGAAGTATACATTCAAAATTGATAGGAGAAATTCTCCTTTAAGACCAACCCGA
GGATATGCCTTTCTGTCGTCTTCTCAAATTGGTGGCGTCTTACCAGATCATCGGGGGTTA
CGCTTTCTCCGTCAGGAGTTGGACTTCCGCTATGCTTTACCTCTGGGATTTTATAATGCT
GCTTTCAACATTGGAATTTCCGCTGGTGTAACTGTTCCATGGGGAAGTGGGTTCTTAAGT
CATCCCACCTATTTACCTGAGAAATTTTTCCTGGGTGGTAATTCTTCTCCAGTTTGTGCA
CTGGGTGGCCCATCATCTTTGTTGGGCTTTAAGACCAGGGGATTGGGCCCTGCTGAACCT
AGAAGGCAAGTTACAGAAAATTCCACTGATGAGAGCTCTGATGCATCTTCTGCAATGGAT
TTCGTGGGAGGAGACCTTGCGGTTACTGCTTTTGCAGACCTTTCTTTTGATCTACCACTG
CGGGTATTGAGAGAAGCTGGGATTCATGGCCATGCTTTTGCTTGTACCGGAAGCCTGAAT
AAATTGACGGAAAATGCGTATAAAGATCTATCTTTACAGAAATTCAAAGAATCATTCCGA
GCGTCGGCCGGATTTGGTGTCATTGTACCGACCAAGCTCTTCCGAATGGAGGTTAATTAC
TGCTATATACTGAAGCAGCAAGAGCATGACCGAGGGAAGACTGGTGTGCAGTTCAGCTTC
TCCTCATCTTTCTAG