Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020708
CDS Infomation

pacid=37474474 polypeptide=PGSC0003DMP400014118 locus=PGSC0003DMG400008026 ID=PGSC0003DMT400020708.v4.03 annot-version=v4.03
Sequence

ATGTCTGGAATGGAAAGATTGCAGCGGATGTTCGCCGGAGCTGGTGGCGCGTTGGGACAC
CCGCCACCGGACTCTCCAACTCTGGACTCTTCTGAGCAAGTCTACATCTCTTCTCTTGCC
CTCCTAAAGATGCTTAAACACGGGAGGGCTGGAGTTCCTATGGAGGTGATGGGATTGATG
TTAGGGGATTTCGTCGATGAGTATACAGTGCGTGTAGTGGATGTGTTTGCAATGCCTCAG
AGTGGTACTGGTGTGAGTGTTGAAGCTGTTGATCATGTTTTTCAGACCAATATGCTTGAC
ATGCTCAAGCAAACTGGGAGACCTGAGATGGTTGTTGGTTGGTATCACTCACATCCTGGA
TTTGGCTGCTGGCTTTCTGGTGTTGACATCAATACTCAGCAGAGTTTTGAAGCACTGAAT
CAACGAGCAGTGGCTGTGGTGGTGGATCCTATTCAGAGTGTTAAAGGGAAGGTGGTAATT
GATGCCTTTCGCTTGATCAATCCCCAAACTATGATGCTTGGCCAAGAGCCACGACAGACA
ACATCAAATCTGGGACATCTGAACAAACCATCTATTCAAGCATTGATCCATGGTTTGAAC
AGACACTACTACTCAATAGCCATAAACTACAGAAAGAATGAACTTGAAGAGAAGATGCTA
CTGAATCTTCACAAGAAGAAATGGACAGATGGACTTGCTCTCCAGCGTTTTGATGCTCAT
TCCAAAACCAATGAGCAGACAGTTCAGGAGATGTTAAACCTTGCTGTCAAGTATAATAAA
GCAGTGCAGCAGGAGGATGAGTTGTCCCCAGAAAAGCTAGCTATTGCAAATGTAGGAAGG
CAAGATGCAAAGAAGCATCTTGAAGAACATGTCTCAAATTTGATGTCTTCAAACATTGTC
CAGACATTGGGAACCATGCTCGACACTGTTGTCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014118
PEP Infomation

pacid=37474474 transcript=PGSC0003DMT400020708 locus=PGSC0003DMG400008026 ID=PGSC0003DMT400020708.v4.03 annot-version=v4.03
Sequence

MSGMERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLM
LGDFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPG
FGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQT
TSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLALQRFDAH
SKTNEQTVQEMLNLAVKYNKAVQQEDELSPEKLAIANVGRQDAKKHLEEHVSNLMSSNIV
QTLGTMLDTVVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400020708
Transcript Infomation

pacid=37474474 locus=PGSC0003DMG400008026 ID=PGSC0003DMT400020708.v4.03 annot-version=v4.03
Sequence

ATGTCTGGAATGGAAAGATTGCAGCGGATGTTCGCCGGAGCTGGTGGCGCGTTGGGACAC
CCGCCACCGGACTCTCCAACTCTGGACTCTTCTGAGCAAGTCTACATCTCTTCTCTTGCC
CTCCTAAAGATGCTTAAACACGGGAGGGCTGGAGTTCCTATGGAGGTGATGGGATTGATG
TTAGGGGATTTCGTCGATGAGTATACAGTGCGTGTAGTGGATGTGTTTGCAATGCCTCAG
AGTGGTACTGGTGTGAGTGTTGAAGCTGTTGATCATGTTTTTCAGACCAATATGCTTGAC
ATGCTCAAGCAAACTGGGAGACCTGAGATGGTTGTTGGTTGGTATCACTCACATCCTGGA
TTTGGCTGCTGGCTTTCTGGTGTTGACATCAATACTCAGCAGAGTTTTGAAGCACTGAAT
CAACGAGCAGTGGCTGTGGTGGTGGATCCTATTCAGAGTGTTAAAGGGAAGGTGGTAATT
GATGCCTTTCGCTTGATCAATCCCCAAACTATGATGCTTGGCCAAGAGCCACGACAGACA
ACATCAAATCTGGGACATCTGAACAAACCATCTATTCAAGCATTGATCCATGGTTTGAAC
AGACACTACTACTCAATAGCCATAAACTACAGAAAGAATGAACTTGAAGAGAAGATGCTA
CTGAATCTTCACAAGAAGAAATGGACAGATGGACTTGCTCTCCAGCGTTTTGATGCTCAT
TCCAAAACCAATGAGCAGACAGTTCAGGAGATGTTAAACCTTGCTGTCAAGTATAATAAA
GCAGTGCAGCAGGAGGATGAGTTGTCCCCAGAAAAGCTAGCTATTGCAAATGTAGGAAGG
CAAGATGCAAAGAAGCATCTTGAAGAACATGTCTCAAATTTGATGTCTTCAAACATTGTC
CAGACATTGGGAACCATGCTCGACACTGTTGTCTTCTGA