Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020707
CDS Infomation

pacid=37474655 polypeptide=PGSC0003DMP400014117 locus=PGSC0003DMG400008025 ID=PGSC0003DMT400020707.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATGGTGCTGATGCGATCTTTGTATCGATCGATATGCCGCAGATCTACGGTC
TTCTCCGCCACCGCAGCCGCCACAACCTCCGCCGTCAACCACCAGTCCCTCCGCCACCTC
CATTTCTCACCCCAGTCTTTCTCAGCTTCTCCGAGAAACACTGTTACTGAATGTCAGCAT
CCTTTCACAATGGCAATGGGAAGCATGCGTTCTTTCAGTGAGGATGTAACTCACATGCCT
AAGATAGAAGATTCGGAGGTCAAACGCGCTTTTAAAGACTTGATGGCTGCAAGCTGGCAT
GAGCTCCCAGATCCTGTCGTCTATGATGCAAAGAATGCACTGTCCAAAACTACTGACGAC
AAGGCTGGCCAGGAAGCTTTGGCGAATGTTTTCCGTGCTGCTGAGGCAGTTGAGGAGTTC
ACTGGGATTCTTACATCTCTGAAAATGGATATCGATGATGCTATCGGTTTAAGTGGTGAA
GATGTGAAGCCTTTGTCAAAAGAATTCTCTGATGCACTGCACACAATATTTCAACGCTAC
AACGCATACATGAGTGCCTTTGGGCCAGAGGAGGAATATTTGAGGAAGAAAGTTGAGATG
GAGCTGGGGACTAGGATGATACACTTAAAGATGCGATGCAGTGGCCTCGATGCTGCATGG
GGAAAGGTTACGGTACTTGGGACTTCTGGACTTGCTGGTTCTTATGTTGAGCAAAGAGCA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400014117
PEP Infomation

pacid=37474655 transcript=PGSC0003DMT400020707 locus=PGSC0003DMG400008025 ID=PGSC0003DMT400020707.v4.03 annot-version=v4.03
Sequence

MEKMVLMRSLYRSICRRSTVFSATAAATTSAVNHQSLRHLHFSPQSFSASPRNTVTECQH
PFTMAMGSMRSFSEDVTHMPKIEDSEVKRAFKDLMAASWHELPDPVVYDAKNALSKTTDD
KAGQEALANVFRAAEAVEEFTGILTSLKMDIDDAIGLSGEDVKPLSKEFSDALHTIFQRY
NAYMSAFGPEEEYLRKKVEMELGTRMIHLKMRCSGLDAAWGKVTVLGTSGLAGSYVEQRA
*

Transcript Sequence

Transcript ID

PGSC0003DMT400020707
Transcript Infomation

pacid=37474655 locus=PGSC0003DMG400008025 ID=PGSC0003DMT400020707.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATGGTGCTGATGCGATCTTTGTATCGATCGATATGCCGCAGATCTACGGTC
TTCTCCGCCACCGCAGCCGCCACAACCTCCGCCGTCAACCACCAGTCCCTCCGCCACCTC
CATTTCTCACCCCAGTCTTTCTCAGCTTCTCCGAGAAACACTGTTACTGAATGTCAGCAT
CCTTTCACAATGGCAATGGGAAGCATGCGTTCTTTCAGTGAGGATGTAACTCACATGCCT
AAGATAGAAGATTCGGAGGTCAAACGCGCTTTTAAAGACTTGATGGCTGCAAGCTGGCAT
GAGCTCCCAGATCCTGTCGTCTATGATGCAAAGAATGCACTGTCCAAAACTACTGACGAC
AAGGCTGGCCAGGAAGCTTTGGCGAATGTTTTCCGTGCTGCTGAGGCAGTTGAGGAGTTC
ACTGGGATTCTTACATCTCTGAAAATGGATATCGATGATGCTATCGGTTTAAGTGGTGAA
GATGTGAAGCCTTTGTCAAAAGAATTCTCTGATGCACTGCACACAATATTTCAACGCTAC
AACGCATACATGAGTGCCTTTGGGCCAGAGGAGGAATATTTGAGGAAGAAAGTTGAGATG
GAGCTGGGGACTAGGATGATACACTTAAAGATGCGATGCAGTGGCCTCGATGCTGCATGG
GGAAAGGTTACGGTACTTGGGACTTCTGGACTTGCTGGTTCTTATGTTGAGCAAAGAGCA
TAG