Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020697
CDS Infomation

pacid=37471676 polypeptide=PGSC0003DMP400014108 locus=PGSC0003DMG400008020 ID=PGSC0003DMT400020697.v4.03 annot-version=v4.03
Sequence

ATGGATAATATGAGAGTTGGAGAACAAGAATTGAAGCAGAGCAATAAAGAAAACCAGAAA
ACAGAGCCACCACAGTCCGGCGGTGGTGCTGCGGCGTCACCACCGTCAGCTTCATCATCT
CCGGCGCATGAGTTCTCCTTCACAATTTCACTTCACCCAACAAATTCCACAAAAGCCCTT
GAAAGTAAAACCAAACAAAATCTGAATCCGAACTTGAACCCGAACCCGAATCAGAACCCA
TCCGCCATTGATTTAACTCCAGCTGATGAAATTTTCTTCCATGGCCATTTACTTCCTCTT
CATCTTCTTTCCCATCTTCCTGTTTCACCTCGCTCTTCAACAAATTCCATTGACAGTTCA
ATCCCCATTAGTAAATCAGAACAAAAAATCCAAAAATCCATTAATCACTTAGATGATGAT
GATGATGATAATTCTTATTATGATTTAAACCATAGTTTTCATCATCATCCCGAAACAACA
AATTCATTTAACATACCCAAAGATCAAAAACCCAAATCCAAATCTTTTTCCATATTTGGA
TTACCCAAACGAAAAAAAGGCGAAAAGGATGAGAAAGAAAAACAGAGGAAGCTGAAATTC
GATGTAAGTCAAGTTTTGAAAAGGTATATGAGAATGGTGAGACCATTTTTATCATTTGGA
AGCAGAAAAAATATGCAATTTCATAGACAAAGTTATTCATATTCTGGGAATTTGAGTTTT
CGAGGAAAGAATACTAGTAATAGTAATAATAATAGTAGTAAAGGAATAAAGAGAGGTGCA
TATTCAGCTCCAGTTTCTATGAAGAATTCACCAACAAATAGTGGATTACTTGTAGCAACA
CCTGGAGGTAATTATGGTAATTCATCATCTTCTTCAAGTAGTGATAGTACTATGGAAGAA
TTACAATCTGCTATTCAAGCTGCAATTGCTCATTGCAAGAAATCTAGTTCTTCAATGGAA
GACAAGAAAATCAAGATTTCATCATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014108
PEP Infomation

pacid=37471676 transcript=PGSC0003DMT400020697 locus=PGSC0003DMG400008020 ID=PGSC0003DMT400020697.v4.03 annot-version=v4.03
Sequence

MDNMRVGEQELKQSNKENQKTEPPQSGGGAAASPPSASSSPAHEFSFTISLHPTNSTKAL
ESKTKQNLNPNLNPNPNQNPSAIDLTPADEIFFHGHLLPLHLLSHLPVSPRSSTNSIDSS
IPISKSEQKIQKSINHLDDDDDDNSYYDLNHSFHHHPETTNSFNIPKDQKPKSKSFSIFG
LPKRKKGEKDEKEKQRKLKFDVSQVLKRYMRMVRPFLSFGSRKNMQFHRQSYSYSGNLSF
RGKNTSNSNNNSSKGIKRGAYSAPVSMKNSPTNSGLLVATPGGNYGNSSSSSSSDSTMEE
LQSAIQAAIAHCKKSSSSMEDKKIKISSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400020697
Transcript Infomation

pacid=37471676 locus=PGSC0003DMG400008020 ID=PGSC0003DMT400020697.v4.03 annot-version=v4.03
Sequence

ATGGATAATATGAGAGTTGGAGAACAAGAATTGAAGCAGAGCAATAAAGAAAACCAGAAA
ACAGAGCCACCACAGTCCGGCGGTGGTGCTGCGGCGTCACCACCGTCAGCTTCATCATCT
CCGGCGCATGAGTTCTCCTTCACAATTTCACTTCACCCAACAAATTCCACAAAAGCCCTT
GAAAGTAAAACCAAACAAAATCTGAATCCGAACTTGAACCCGAACCCGAATCAGAACCCA
TCCGCCATTGATTTAACTCCAGCTGATGAAATTTTCTTCCATGGCCATTTACTTCCTCTT
CATCTTCTTTCCCATCTTCCTGTTTCACCTCGCTCTTCAACAAATTCCATTGACAGTTCA
ATCCCCATTAGTAAATCAGAACAAAAAATCCAAAAATCCATTAATCACTTAGATGATGAT
GATGATGATAATTCTTATTATGATTTAAACCATAGTTTTCATCATCATCCCGAAACAACA
AATTCATTTAACATACCCAAAGATCAAAAACCCAAATCCAAATCTTTTTCCATATTTGGA
TTACCCAAACGAAAAAAAGGCGAAAAGGATGAGAAAGAAAAACAGAGGAAGCTGAAATTC
GATGTAAGTCAAGTTTTGAAAAGGTATATGAGAATGGTGAGACCATTTTTATCATTTGGA
AGCAGAAAAAATATGCAATTTCATAGACAAAGTTATTCATATTCTGGGAATTTGAGTTTT
CGAGGAAAGAATACTAGTAATAGTAATAATAATAGTAGTAAAGGAATAAAGAGAGGTGCA
TATTCAGCTCCAGTTTCTATGAAGAATTCACCAACAAATAGTGGATTACTTGTAGCAACA
CCTGGAGGTAATTATGGTAATTCATCATCTTCTTCAAGTAGTGATAGTACTATGGAAGAA
TTACAATCTGCTATTCAAGCTGCAATTGCTCATTGCAAGAAATCTAGTTCTTCAATGGAA
GACAAGAAAATCAAGATTTCATCATCATGA