Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020680
CDS Infomation

pacid=37473312 polypeptide=PGSC0003DMP400014093 locus=PGSC0003DMG400008016 ID=PGSC0003DMT400020680.v4.03 annot-version=v4.03
Sequence

ATGATTATGAAGTCCCTTCCTTCTAAAGCATTGATCATCAAAATCAACTTGGTTTTTTTG
GCTTGTTTCTTGATTGGTTATGCTGCTATTCTTCTAAAGCCATCAACTTATGTTTATCAT
GAATATGCAACATCTCTTGTTAGATGTTCATTGAGAGAATGTCATCATAAGGGAGAAGGA
GGGATAAAGATGAAAGCAGTATTAGAAGAAAAAATGGTTATGAATGAAGCAAAAACAGAG
GAAAAGTTAATACTAAAGCGCGAAAAGCCGAGTTTTTTAAATAAAATGGGGAGAGGAATG
AAGATAGGAATGGTAAATATGGAAGGTGAAGATGTTAGTGAATGGAAAATCTATGGCCAA
ATAACAAACATTAAATTCGAGAAAGTCTCGAATTTATTTGAATGGAAAGATATATTTCCA
GAATGGATAGATGAAGAAGAAGAAATGGATGGACCAATGTGTCCTGAAATACCAATGCCA
AATTTTAATAACTATAGAGATAATATGGATATGTTAGTTGTTAAATTGCCATGTAAATAT
CCACAAGAAGGATGGGGAAGAGATGTTTATATGTTACAAGTGAATCTTGTGGCTGCAAAT
TTGGCTGTGAAAAGAGGAATTGGAAAGAAAATGAAATTGATTTTTTTGAGTAAGTGTAGA
CCTATGGTGGAAATGTTTAGATGTGAGGAGTTGAAGAAAAAAGAAGGTGATTGGTGGTAT
TATGAGTCAAATATGGATAAATTGGCTCAAAAAGTTTCATTGCCAATTGGTTCTTGTATG
TTGGCTTTGCCTCTATGGGGAAAAGAAATCAACGAAGTGTATGATATTTCGAAAATAGAA
AGCAGCACAAAAGTACCAACAAGAGAAGCTTATGCCACGGTTCTTCATTCATCAGAAACA
TATGTTTGTGGTGCAATAACATTAGCTCAGAGTCTTCTTCGAACTGGAACCAAACGGGAC
CTAATTCTTCTTCTGGATAACAGTATTTCTGAATCTAAACGCGACGCGCTTATAAAAGCA
GGGTGGAAACTACGGTTCATAAAGAGGATAAGAAACCCTAGAGCTGAAAAAAATACGTAT
AATGAGTATAATTACAGCAAGTTCAGGTTATGGCAGCTTACGGATTATGATAAAATCATT
TTCATTGATGCTGATATTATTGTTCTTCGTAACATTGACCTCCTTTTCCATTTTCCTCAA
ATGACGGCTACAGGTAACGATGCATCAATCTTCAATTCTGGAATAATGGTGATCGAGCCA
TCAAATTGCACCTTCAAAATGTTCATGAAACGTACAAAAGAGATCATTTCATATAATGGA
GGTGACCAAGGTTTCCTTAATGAAGTATTTGTATGGTGGCATAGATTGCCTAGAAGGGTT
AATTTCTTAAAGAACTTTTGGTCAAATAATTCGAACGAGGTCAGCGTTAAGAATCAACTA
TTCGGGGCAGATCCTCCAAAAGTATACTCTATACATTATCTCGGGTTAAAGCCATGGGTA
TGTTACAGGGACTACGATTGTAACTGGGACATAGGTGATCAACGTGTTTATGCTAGCGAT
ATCGCACATGAGACATGGTGGAAATTACATGACTCAATGGATGAGAGTTTACAAAAATTG
TGTGGATTGACAGAGCAAAGGAAAATTGAATTAGAATGGGATAGAAAATTGGCTGGAAAA
ATTGGATTTAAAGATGAACATTGGAGGATTAATGTTACTGATCCTAGAAAATTTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014093
PEP Infomation

pacid=37473312 transcript=PGSC0003DMT400020680 locus=PGSC0003DMG400008016 ID=PGSC0003DMT400020680.v4.03 annot-version=v4.03
Sequence

MIMKSLPSKALIIKINLVFLACFLIGYAAILLKPSTYVYHEYATSLVRCSLRECHHKGEG
GIKMKAVLEEKMVMNEAKTEEKLILKREKPSFLNKMGRGMKIGMVNMEGEDVSEWKIYGQ
ITNIKFEKVSNLFEWKDIFPEWIDEEEEMDGPMCPEIPMPNFNNYRDNMDMLVVKLPCKY
PQEGWGRDVYMLQVNLVAANLAVKRGIGKKMKLIFLSKCRPMVEMFRCEELKKKEGDWWY
YESNMDKLAQKVSLPIGSCMLALPLWGKEINEVYDISKIESSTKVPTREAYATVLHSSET
YVCGAITLAQSLLRTGTKRDLILLLDNSISESKRDALIKAGWKLRFIKRIRNPRAEKNTY
NEYNYSKFRLWQLTDYDKIIFIDADIIVLRNIDLLFHFPQMTATGNDASIFNSGIMVIEP
SNCTFKMFMKRTKEIISYNGGDQGFLNEVFVWWHRLPRRVNFLKNFWSNNSNEVSVKNQL
FGADPPKVYSIHYLGLKPWVCYRDYDCNWDIGDQRVYASDIAHETWWKLHDSMDESLQKL
CGLTEQRKIELEWDRKLAGKIGFKDEHWRINVTDPRKFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400020680
Transcript Infomation

pacid=37473312 locus=PGSC0003DMG400008016 ID=PGSC0003DMT400020680.v4.03 annot-version=v4.03
Sequence

ATGATTATGAAGTCCCTTCCTTCTAAAGCATTGATCATCAAAATCAACTTGGTTTTTTTG
GCTTGTTTCTTGATTGGTTATGCTGCTATTCTTCTAAAGCCATCAACTTATGTTTATCAT
GAATATGCAACATCTCTTGTTAGATGTTCATTGAGAGAATGTCATCATAAGGGAGAAGGA
GGGATAAAGATGAAAGCAGTATTAGAAGAAAAAATGGTTATGAATGAAGCAAAAACAGAG
GAAAAGTTAATACTAAAGCGCGAAAAGCCGAGTTTTTTAAATAAAATGGGGAGAGGAATG
AAGATAGGAATGGTAAATATGGAAGGTGAAGATGTTAGTGAATGGAAAATCTATGGCCAA
ATAACAAACATTAAATTCGAGAAAGTCTCGAATTTATTTGAATGGAAAGATATATTTCCA
GAATGGATAGATGAAGAAGAAGAAATGGATGGACCAATGTGTCCTGAAATACCAATGCCA
AATTTTAATAACTATAGAGATAATATGGATATGTTAGTTGTTAAATTGCCATGTAAATAT
CCACAAGAAGGATGGGGAAGAGATGTTTATATGTTACAAGTGAATCTTGTGGCTGCAAAT
TTGGCTGTGAAAAGAGGAATTGGAAAGAAAATGAAATTGATTTTTTTGAGTAAGTGTAGA
CCTATGGTGGAAATGTTTAGATGTGAGGAGTTGAAGAAAAAAGAAGGTGATTGGTGGTAT
TATGAGTCAAATATGGATAAATTGGCTCAAAAAGTTTCATTGCCAATTGGTTCTTGTATG
TTGGCTTTGCCTCTATGGGGAAAAGAAATCAACGAAGTGTATGATATTTCGAAAATAGAA
AGCAGCACAAAAGTACCAACAAGAGAAGCTTATGCCACGGTTCTTCATTCATCAGAAACA
TATGTTTGTGGTGCAATAACATTAGCTCAGAGTCTTCTTCGAACTGGAACCAAACGGGAC
CTAATTCTTCTTCTGGATAACAGTATTTCTGAATCTAAACGCGACGCGCTTATAAAAGCA
GGGTGGAAACTACGGTTCATAAAGAGGATAAGAAACCCTAGAGCTGAAAAAAATACGTAT
AATGAGTATAATTACAGCAAGTTCAGGTTATGGCAGCTTACGGATTATGATAAAATCATT
TTCATTGATGCTGATATTATTGTTCTTCGTAACATTGACCTCCTTTTCCATTTTCCTCAA
ATGACGGCTACAGGTAACGATGCATCAATCTTCAATTCTGGAATAATGGTGATCGAGCCA
TCAAATTGCACCTTCAAAATGTTCATGAAACGTACAAAAGAGATCATTTCATATAATGGA
GGTGACCAAGGTTTCCTTAATGAAGTATTTGTATGGTGGCATAGATTGCCTAGAAGGGTT
AATTTCTTAAAGAACTTTTGGTCAAATAATTCGAACGAGGTCAGCGTTAAGAATCAACTA
TTCGGGGCAGATCCTCCAAAAGTATACTCTATACATTATCTCGGGTTAAAGCCATGGGTA
TGTTACAGGGACTACGATTGTAACTGGGACATAGGTGATCAACGTGTTTATGCTAGCGAT
ATCGCACATGAGACATGGTGGAAATTACATGACTCAATGGATGAGAGTTTACAAAAATTG
TGTGGATTGACAGAGCAAAGGAAAATTGAATTAGAATGGGATAGAAAATTGGCTGGAAAA
ATTGGATTTAAAGATGAACATTGGAGGATTAATGTTACTGATCCTAGAAAATTTTCTTGA