Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020677
CDS Infomation

pacid=37476063 polypeptide=PGSC0003DMP400014091 locus=PGSC0003DMG400008014 ID=PGSC0003DMT400020677.v4.03 annot-version=v4.03
Sequence

ATGGGAGATGCTAAAGATATGAAGGAAAATGCTCCTCCAGAACCGTCCCATGAACCTAAG
GTTTCCTCTCCAAATGACGATCAATCACATAGTGCAGCTCAAACCAGCCAACATACCAGT
GAAATAGAGATCTCCAAAATTCAGGAGACAGCTGTAGATGCTTCAGAACATTTAAAAGAG
GCTTCTCATAGTTTACTGCAGGAAAGTCAGACTCCTGCAGGAGGAAATTTAATTTCGGCC
GCTCCCATTAAATCTGATGGAATGAGTACCATTTCTGAAACAGGAATTTCTCAAATGGTT
TCTGGTACACCTATGGTTGAGCCGGAAGCCTCACCTCAATTAGCACATGATCTGAAAACA
GACCCTTCTGCACATAGTATTGCAACAGCTCTCTCAGAATCCAATTCATCTTCCACATTG
GATGCAAAGCCAAGTGAAATCTTGGAGCCAGCATTGGACATGGGTGCTAATGTTAAGGTT
CAGAACCAGCCAAATGATTCCTCTGAAGGACCAACAGCCGAGAAAGATGCTTCATCAGCA
TTAACCGGATCGACTCTAAAAGAGGAAAATAGAAAGGAATCTTCTGAATATGTTCAATCT
AATCATTCAGAAGTAGCAAAGGCATCTTCTGAGCATGTTCAATCTAACCATTCAGAAGTA
GCAAAGGAATCTTCTGAACATGTTCAATCTAATCATTCAGAGGTAGAACCAAATAATGCC
TCACTGTTTCATCAGCCAGATAATTCTAGTAGTAGTACCCATATCGATGCGGATGACTCT
TCTCCTTTATCCACTCAAGTGATGAGGAAACCAGAAAATAACCATCATTTACCTACACCA
GATAACATTGTTCGCCCGCTTGCTAAGTCTTCCACATTCTCAGCAAGGGCCTCAATACGC
ACTGCTAGCCCGAAGCATCCTGAAAAATCTGACATAAATAAAGGCCATATCGATACAGCA
GCGCCAATTGAATCTGTGAAGCAGGCAGTTTCCAAGTTTGGAGGGATAGTTGACTGGAAG
GCTCATCGTGTACAGACTGTGGAGAGGCGGCAACTTGTTGAACAAGAACTATCAAAAGTG
CAGGAGGAGATACCATTTTATAAAAAACAGTCTCAGGCTGCTGAAGATGCAAAAGTGTTG
GTCTTGAAGGAATTAGATGGCACTAAGAGACTTATAGAAGAATTGAAGCTGAACCTGGAG
AGAGCACAAAAAGAAGAGCAACAAGCAAAACAGGATTCAGAACTTGCCAAGCTCCGGGTG
GAGGAGATGGAGCAGGGGATTGGCAATGATCTTAGTATTGCAGCGAAAGCACAGCTTGAA
GTTGCTAGGGCCAGGCATGCAGCTGCAGTTTCTGAGCTAAAAACTGTAAAATCTGAGTTA
GAAGATCTTCGAAAAGATTATGCTTTATTGGTGTCTGATAAAGATGGTGCGGTGAAAAGA
GCAGAGGAAGCAGTCTCTGCATCAAAAGAAGTTGAGAAGACGTTGGAGACTTTAACTATA
GAGCTAATCACTGCAAAGGAATCTTTGGAGGTTGCTCATGCTGCACATTTGGAGGCTGAG
GAACACAGAATTGGAGCAGCTATGGCAGGAGAGCAAGATGCTTTAAACTGGGAGAAAGAA
CTGAAGCAAGCAGAAGAGGAGCTTGTCAGACTAAACCAGCAAATTCTGTCTGCCAAGGAT
CTGAGAGGAAAACTAGATACCGCTTCAGTCTTGCTGCTGGATCTCAAAACTGAGTTGGCT
GCTTATATGGAATCAAAGTTGAAGCAGGAAACTGATGAAGGAAACCTCAATGGCGAACAG
TCAGAGCCAGAGAAAAGAACTCACGATGAGATACAATCAGTAGTGACCACAGCTAAGAGG
GAACTAGAAGAAGTGAAACTCAACATCGAGAAGGCTACAACTGAAGTAAATTTCTTGAAG
GTGGCAGCAACTTCATTGAAAGCAGAATTGGAAAAAGAAAAGTCAGAACTAGCTGCGATC
CAACAGAGAGAAGGAATGGCATCGGTTGCTGCTGCATCTCTTGAAGCTGAGTTGAGCAGG
ACGCAGTCAGAGATTGTTCTTGCACAGAAGAAGGAAAAAGAAGCAAGGGAGAAGATGGTA
GAGCTTCCCAAGCAACTCCATGAGGCATCCCAAGAGGCTGATCGTGCAAATTCACTTGCT
CAAATGGCGAGGGATGATCTGAATAAGGCGAAGGAAGAAGCTGAGGAAGCAAAGGCTGGA
GCAAGTACTGTGGAAAGTAGACTACTTGCAGTTAAGAAGGAGATAGAGGCTGCGAAAGCT
GCGGAGAAGTTGGCGCTAGCAGCTATAGCTGCTCTTGAGGAGAGTGAATCAACTCAAAAA
ACCAAAGATGAGGAAACCCCACCTGGAGTAACTCTATCTTTGGAGGAGTATTATGAGCTC
AGCAAGCAGGCGCATGAGGCAGAGGAGCAAGCTAACAAGAAGGTGGCTGATGCTCATACC
CAAATAGATGTAGCCAAGGAGTCAGAGCTGAGAAGCCTAAACAGGCTGGACGAGGTTAAT
CGTGAGATAACTGAAAGAAAGGAAGCTCTAGGAGTTGCATTGCAAAAGGCTGAGAAAGCC
AAGGAAGGGAAGTTGTCTGTAGAGCAAGAGCTGAGGAAATGGAGAGAGGAGCAGGAGCAG
AGACGGAAAGCTGGTGTATCCATTCCACCTACAGCAGGGAGTCCTCGAAAGAGCGATGAG
GAGAACAATGAGTCAAAGACCTCTGAAAGTGCACCGGAGGCTACTGCATCTTATGACAGC
ACAAGTCCGAAAGCCCAACTGCAAGCAAGCAGCACTGAAGCTGATTCATCCCCAGATGTG
AAGGTTCCAAGGAAAAAGAAAAGGTCCTTCTTCCCAAGGATCTTCATGTTTCTAGGCAGA
AGGAAAGCAGCACAGGCCAAGTCTGCTCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014091
PEP Infomation

pacid=37476063 transcript=PGSC0003DMT400020677 locus=PGSC0003DMG400008014 ID=PGSC0003DMT400020677.v4.03 annot-version=v4.03
Sequence

MGDAKDMKENAPPEPSHEPKVSSPNDDQSHSAAQTSQHTSEIEISKIQETAVDASEHLKE
ASHSLLQESQTPAGGNLISAAPIKSDGMSTISETGISQMVSGTPMVEPEASPQLAHDLKT
DPSAHSIATALSESNSSSTLDAKPSEILEPALDMGANVKVQNQPNDSSEGPTAEKDASSA
LTGSTLKEENRKESSEYVQSNHSEVAKASSEHVQSNHSEVAKESSEHVQSNHSEVEPNNA
SLFHQPDNSSSSTHIDADDSSPLSTQVMRKPENNHHLPTPDNIVRPLAKSSTFSARASIR
TASPKHPEKSDINKGHIDTAAPIESVKQAVSKFGGIVDWKAHRVQTVERRQLVEQELSKV
QEEIPFYKKQSQAAEDAKVLVLKELDGTKRLIEELKLNLERAQKEEQQAKQDSELAKLRV
EEMEQGIGNDLSIAAKAQLEVARARHAAAVSELKTVKSELEDLRKDYALLVSDKDGAVKR
AEEAVSASKEVEKTLETLTIELITAKESLEVAHAAHLEAEEHRIGAAMAGEQDALNWEKE
LKQAEEELVRLNQQILSAKDLRGKLDTASVLLLDLKTELAAYMESKLKQETDEGNLNGEQ
SEPEKRTHDEIQSVVTTAKRELEEVKLNIEKATTEVNFLKVAATSLKAELEKEKSELAAI
QQREGMASVAAASLEAELSRTQSEIVLAQKKEKEAREKMVELPKQLHEASQEADRANSLA
QMARDDLNKAKEEAEEAKAGASTVESRLLAVKKEIEAAKAAEKLALAAIAALEESESTQK
TKDEETPPGVTLSLEEYYELSKQAHEAEEQANKKVADAHTQIDVAKESELRSLNRLDEVN
REITERKEALGVALQKAEKAKEGKLSVEQELRKWREEQEQRRKAGVSIPPTAGSPRKSDE
ENNESKTSESAPEATASYDSTSPKAQLQASSTEADSSPDVKVPRKKKRSFFPRIFMFLGR
RKAAQAKSAQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400020677
Transcript Infomation

pacid=37476063 locus=PGSC0003DMG400008014 ID=PGSC0003DMT400020677.v4.03 annot-version=v4.03
Sequence

ATGGGAGATGCTAAAGATATGAAGGAAAATGCTCCTCCAGAACCGTCCCATGAACCTAAG
GTTTCCTCTCCAAATGACGATCAATCACATAGTGCAGCTCAAACCAGCCAACATACCAGT
GAAATAGAGATCTCCAAAATTCAGGAGACAGCTGTAGATGCTTCAGAACATTTAAAAGAG
GCTTCTCATAGTTTACTGCAGGAAAGTCAGACTCCTGCAGGAGGAAATTTAATTTCGGCC
GCTCCCATTAAATCTGATGGAATGAGTACCATTTCTGAAACAGGAATTTCTCAAATGGTT
TCTGGTACACCTATGGTTGAGCCGGAAGCCTCACCTCAATTAGCACATGATCTGAAAACA
GACCCTTCTGCACATAGTATTGCAACAGCTCTCTCAGAATCCAATTCATCTTCCACATTG
GATGCAAAGCCAAGTGAAATCTTGGAGCCAGCATTGGACATGGGTGCTAATGTTAAGGTT
CAGAACCAGCCAAATGATTCCTCTGAAGGACCAACAGCCGAGAAAGATGCTTCATCAGCA
TTAACCGGATCGACTCTAAAAGAGGAAAATAGAAAGGAATCTTCTGAATATGTTCAATCT
AATCATTCAGAAGTAGCAAAGGCATCTTCTGAGCATGTTCAATCTAACCATTCAGAAGTA
GCAAAGGAATCTTCTGAACATGTTCAATCTAATCATTCAGAGGTAGAACCAAATAATGCC
TCACTGTTTCATCAGCCAGATAATTCTAGTAGTAGTACCCATATCGATGCGGATGACTCT
TCTCCTTTATCCACTCAAGTGATGAGGAAACCAGAAAATAACCATCATTTACCTACACCA
GATAACATTGTTCGCCCGCTTGCTAAGTCTTCCACATTCTCAGCAAGGGCCTCAATACGC
ACTGCTAGCCCGAAGCATCCTGAAAAATCTGACATAAATAAAGGCCATATCGATACAGCA
GCGCCAATTGAATCTGTGAAGCAGGCAGTTTCCAAGTTTGGAGGGATAGTTGACTGGAAG
GCTCATCGTGTACAGACTGTGGAGAGGCGGCAACTTGTTGAACAAGAACTATCAAAAGTG
CAGGAGGAGATACCATTTTATAAAAAACAGTCTCAGGCTGCTGAAGATGCAAAAGTGTTG
GTCTTGAAGGAATTAGATGGCACTAAGAGACTTATAGAAGAATTGAAGCTGAACCTGGAG
AGAGCACAAAAAGAAGAGCAACAAGCAAAACAGGATTCAGAACTTGCCAAGCTCCGGGTG
GAGGAGATGGAGCAGGGGATTGGCAATGATCTTAGTATTGCAGCGAAAGCACAGCTTGAA
GTTGCTAGGGCCAGGCATGCAGCTGCAGTTTCTGAGCTAAAAACTGTAAAATCTGAGTTA
GAAGATCTTCGAAAAGATTATGCTTTATTGGTGTCTGATAAAGATGGTGCGGTGAAAAGA
GCAGAGGAAGCAGTCTCTGCATCAAAAGAAGTTGAGAAGACGTTGGAGACTTTAACTATA
GAGCTAATCACTGCAAAGGAATCTTTGGAGGTTGCTCATGCTGCACATTTGGAGGCTGAG
GAACACAGAATTGGAGCAGCTATGGCAGGAGAGCAAGATGCTTTAAACTGGGAGAAAGAA
CTGAAGCAAGCAGAAGAGGAGCTTGTCAGACTAAACCAGCAAATTCTGTCTGCCAAGGAT
CTGAGAGGAAAACTAGATACCGCTTCAGTCTTGCTGCTGGATCTCAAAACTGAGTTGGCT
GCTTATATGGAATCAAAGTTGAAGCAGGAAACTGATGAAGGAAACCTCAATGGCGAACAG
TCAGAGCCAGAGAAAAGAACTCACGATGAGATACAATCAGTAGTGACCACAGCTAAGAGG
GAACTAGAAGAAGTGAAACTCAACATCGAGAAGGCTACAACTGAAGTAAATTTCTTGAAG
GTGGCAGCAACTTCATTGAAAGCAGAATTGGAAAAAGAAAAGTCAGAACTAGCTGCGATC
CAACAGAGAGAAGGAATGGCATCGGTTGCTGCTGCATCTCTTGAAGCTGAGTTGAGCAGG
ACGCAGTCAGAGATTGTTCTTGCACAGAAGAAGGAAAAAGAAGCAAGGGAGAAGATGGTA
GAGCTTCCCAAGCAACTCCATGAGGCATCCCAAGAGGCTGATCGTGCAAATTCACTTGCT
CAAATGGCGAGGGATGATCTGAATAAGGCGAAGGAAGAAGCTGAGGAAGCAAAGGCTGGA
GCAAGTACTGTGGAAAGTAGACTACTTGCAGTTAAGAAGGAGATAGAGGCTGCGAAAGCT
GCGGAGAAGTTGGCGCTAGCAGCTATAGCTGCTCTTGAGGAGAGTGAATCAACTCAAAAA
ACCAAAGATGAGGAAACCCCACCTGGAGTAACTCTATCTTTGGAGGAGTATTATGAGCTC
AGCAAGCAGGCGCATGAGGCAGAGGAGCAAGCTAACAAGAAGGTGGCTGATGCTCATACC
CAAATAGATGTAGCCAAGGAGTCAGAGCTGAGAAGCCTAAACAGGCTGGACGAGGTTAAT
CGTGAGATAACTGAAAGAAAGGAAGCTCTAGGAGTTGCATTGCAAAAGGCTGAGAAAGCC
AAGGAAGGGAAGTTGTCTGTAGAGCAAGAGCTGAGGAAATGGAGAGAGGAGCAGGAGCAG
AGACGGAAAGCTGGTGTATCCATTCCACCTACAGCAGGGAGTCCTCGAAAGAGCGATGAG
GAGAACAATGAGTCAAAGACCTCTGAAAGTGCACCGGAGGCTACTGCATCTTATGACAGC
ACAAGTCCGAAAGCCCAACTGCAAGCAAGCAGCACTGAAGCTGATTCATCCCCAGATGTG
AAGGTTCCAAGGAAAAAGAAAAGGTCCTTCTTCCCAAGGATCTTCATGTTTCTAGGCAGA
AGGAAAGCAGCACAGGCCAAGTCTGCTCAATGA