Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020668
CDS Infomation

pacid=37473393 polypeptide=PGSC0003DMP400014084 locus=PGSC0003DMG402008010 ID=PGSC0003DMT400020668.v4.03 annot-version=v4.03
Sequence

ATGCCGGAGCTAGGGTTTCAGGATTCGAGATCGGGGTTAGGATTTAGTAGAAGTGTTCGT
GATGTTAGTCCGGACTCTGTTATTTACACCGGCGATTCCAATTTCAGTATTTTCTCCTCT
GCTTCCGGCAGCGTTGACCGGTGCTCATTCGCTTCCGATGCTCATGATCAGGATTCCTCT
GTTTCCGATGTTTCTCAACATTTGGCAGGGCATGAATGCCGTGAAGCTTCGGGTGGTACA
GTTACAGATCCAAACAAAACCATGGTACACAGAAATAGTCACCTTAGCAGAAAGGAAAAG
GCAAAAGTTCAAAAGGCAGAGAAGAACAGCGAGATTGAGACAGAGGATGAAAATCTCTCT
TTAGATTCCGCAAGAAACTCCTTTTCTCAAGCTCTTAAAGAATGTCAAGACCGGAGATTT
GGGTCGGGATCTTTACTGAAGAAACCAGATAGGCGAAGACCTGCTTCATTAGATCTAAAC
AATGCTGTGATTAACACCTGCCACTCTTCTTCTCCGCGTTTTGGAGTCATGAAGAAAACC
CCTATTACGACTAGCCGAGTTGGAACATTTCCGAGTCCAAGAACGCCAAATTATCGCCAT
TCCAGTGTTGGGGTTCAAAAAGGCTGGAGTTCAGAGCGTGTGCCACTGCATTCATCTGCT
AATAGGAGGCAGGTCAATACTGCTTTGCTGCCTTATAATAATGGAAGGATATTACCTTCC
AAATGGGAGGATGCAGAGAGGTGGATTTTTAGCCCGGTCTCAGGAGATAGTTCTGTTAAA
ACTTCATTACAGCAGCCACAGAGGCGGCCTAAATCCAAAAGTGGGCCTCTTGGTCCTCCT
GGTCAAGCTTACTATTCAATGTATTCTCCTGCACCACCTGTTTTTAAGGGAGGAAATGGT
GGTAATCTCTTAGCCAATTCCCCCTTTTCAACAGGAGTGATGACAACTGATGGTTTGTCA
ATTAGATGTGGAGGCAACCTAGGCAGTGGAAACTTCCATGCGCTCGCAGAACCATGCATG
GCAAGGTCAGTTAGTGTACATGGATGCTCTGAACTGGTCTGTTTATCAACCTTGCCAATG
TCCCAAGATGAGAGTGGGGATGATATTCAAGATGAAGCCAATGTTGTGTCACGAGTTATA
TCGAGGAGGGATATGGCCACTCAAATGAGTCCCGAGGCAAGCCCTTCCTCATCTCCTATA
AGACAGTCATCCTTCTCTCCTTCAACTCCATCTATTCTACCACTTGTAGAATTGCAGAAT
GTTCCTTCTTCTAAAGCAGAAATGAGAGATGTTCCAATTGATGAGCGGGTTACAGTGACC
AGATGGTCAAAGAAACAGAAAGCTCGAATTCCTGGTAGGAGCATGGAACTTGATGACTGG
AAAAGGAAAGCTATGGAAATCCGCTCTTCAGGTTGGGATGTTTCAGATACATCAACAAGT
ATTTCAAAGATTAAGAGGGAAGAAGCTAGAATCACTGCATGGGAGAACCTGCAAAAGGCA
AAAGCAGAGGCAGCAATGAGGAAACTGGAGATGAAACTGGAGAAAAAGAGATCGTCATCC
ATGGATAAGATTATGAACAAACTTAGATCGGCACAGAAAAAGGCCCATGAAATGAGAAGT
TCAATGTTAGCCAACCAATCACATGAAGTAACAAGATCATCCAGCAAGGCCTTATCTTTC
CGTCAGACACGCCAAATAGGGTCTCTGAGTGGCTGCTTTACATGCCATGCATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014084
PEP Infomation

pacid=37473393 transcript=PGSC0003DMT400020668 locus=PGSC0003DMG402008010 ID=PGSC0003DMT400020668.v4.03 annot-version=v4.03
Sequence

MPELGFQDSRSGLGFSRSVRDVSPDSVIYTGDSNFSIFSSASGSVDRCSFASDAHDQDSS
VSDVSQHLAGHECREASGGTVTDPNKTMVHRNSHLSRKEKAKVQKAEKNSEIETEDENLS
LDSARNSFSQALKECQDRRFGSGSLLKKPDRRRPASLDLNNAVINTCHSSSPRFGVMKKT
PITTSRVGTFPSPRTPNYRHSSVGVQKGWSSERVPLHSSANRRQVNTALLPYNNGRILPS
KWEDAERWIFSPVSGDSSVKTSLQQPQRRPKSKSGPLGPPGQAYYSMYSPAPPVFKGGNG
GNLLANSPFSTGVMTTDGLSIRCGGNLGSGNFHALAEPCMARSVSVHGCSELVCLSTLPM
SQDESGDDIQDEANVVSRVISRRDMATQMSPEASPSSSPIRQSSFSPSTPSILPLVELQN
VPSSKAEMRDVPIDERVTVTRWSKKQKARIPGRSMELDDWKRKAMEIRSSGWDVSDTSTS
ISKIKREEARITAWENLQKAKAEAAMRKLEMKLEKKRSSSMDKIMNKLRSAQKKAHEMRS
SMLANQSHEVTRSSSKALSFRQTRQIGSLSGCFTCHAF*

Transcript Sequence

Transcript ID

PGSC0003DMT400020668
Transcript Infomation

pacid=37473393 locus=PGSC0003DMG402008010 ID=PGSC0003DMT400020668.v4.03 annot-version=v4.03
Sequence

ATGCCGGAGCTAGGGTTTCAGGATTCGAGATCGGGGTTAGGATTTAGTAGAAGTGTTCGT
GATGTTAGTCCGGACTCTGTTATTTACACCGGCGATTCCAATTTCAGTATTTTCTCCTCT
GCTTCCGGCAGCGTTGACCGGTGCTCATTCGCTTCCGATGCTCATGATCAGGATTCCTCT
GTTTCCGATGTTTCTCAACATTTGGCAGGGCATGAATGCCGTGAAGCTTCGGGTGGTACA
GTTACAGATCCAAACAAAACCATGGTACACAGAAATAGTCACCTTAGCAGAAAGGAAAAG
GCAAAAGTTCAAAAGGCAGAGAAGAACAGCGAGATTGAGACAGAGGATGAAAATCTCTCT
TTAGATTCCGCAAGAAACTCCTTTTCTCAAGCTCTTAAAGAATGTCAAGACCGGAGATTT
GGGTCGGGATCTTTACTGAAGAAACCAGATAGGCGAAGACCTGCTTCATTAGATCTAAAC
AATGCTGTGATTAACACCTGCCACTCTTCTTCTCCGCGTTTTGGAGTCATGAAGAAAACC
CCTATTACGACTAGCCGAGTTGGAACATTTCCGAGTCCAAGAACGCCAAATTATCGCCAT
TCCAGTGTTGGGGTTCAAAAAGGCTGGAGTTCAGAGCGTGTGCCACTGCATTCATCTGCT
AATAGGAGGCAGGTCAATACTGCTTTGCTGCCTTATAATAATGGAAGGATATTACCTTCC
AAATGGGAGGATGCAGAGAGGTGGATTTTTAGCCCGGTCTCAGGAGATAGTTCTGTTAAA
ACTTCATTACAGCAGCCACAGAGGCGGCCTAAATCCAAAAGTGGGCCTCTTGGTCCTCCT
GGTCAAGCTTACTATTCAATGTATTCTCCTGCACCACCTGTTTTTAAGGGAGGAAATGGT
GGTAATCTCTTAGCCAATTCCCCCTTTTCAACAGGAGTGATGACAACTGATGGTTTGTCA
ATTAGATGTGGAGGCAACCTAGGCAGTGGAAACTTCCATGCGCTCGCAGAACCATGCATG
GCAAGGTCAGTTAGTGTACATGGATGCTCTGAACTGGTCTGTTTATCAACCTTGCCAATG
TCCCAAGATGAGAGTGGGGATGATATTCAAGATGAAGCCAATGTTGTGTCACGAGTTATA
TCGAGGAGGGATATGGCCACTCAAATGAGTCCCGAGGCAAGCCCTTCCTCATCTCCTATA
AGACAGTCATCCTTCTCTCCTTCAACTCCATCTATTCTACCACTTGTAGAATTGCAGAAT
GTTCCTTCTTCTAAAGCAGAAATGAGAGATGTTCCAATTGATGAGCGGGTTACAGTGACC
AGATGGTCAAAGAAACAGAAAGCTCGAATTCCTGGTAGGAGCATGGAACTTGATGACTGG
AAAAGGAAAGCTATGGAAATCCGCTCTTCAGGTTGGGATGTTTCAGATACATCAACAAGT
ATTTCAAAGATTAAGAGGGAAGAAGCTAGAATCACTGCATGGGAGAACCTGCAAAAGGCA
AAAGCAGAGGCAGCAATGAGGAAACTGGAGATGAAACTGGAGAAAAAGAGATCGTCATCC
ATGGATAAGATTATGAACAAACTTAGATCGGCACAGAAAAAGGCCCATGAAATGAGAAGT
TCAATGTTAGCCAACCAATCACATGAAGTAACAAGATCATCCAGCAAGGCCTTATCTTTC
CGTCAGACACGCCAAATAGGGTCTCTGAGTGGCTGCTTTACATGCCATGCATTTTGA