Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020648
CDS Infomation

pacid=37472410 polypeptide=PGSC0003DMP400014067 locus=PGSC0003DMG400008001 ID=PGSC0003DMT400020648.v4.03 annot-version=v4.03
Sequence

ATGTCTCACCATTATCAAGAACAAGAAGAACAAAAGATCCCATTTTTATTAGATTCACTT
TACTGTGAAGAAGATATTCTCACTGAAGTATCAGTAGAAACAGAGAGTTTTTCTTCACAT
GACTTGTTATGGGAAGAAGAAGAACTTACCTCTCTGTTTTCTAAAGAAACAGAGTATGAA
ATAAGCTACAATGTGTTAGAAAAAGACCAATCTTTTATTTCAGCAAGAAGAGAATCAGTT
GAGTGGATACTCAAAACAACTGCTTATTACTCATTTTCTGCACAAACTGCATTTCTTGCA
GTTAATTACTTTGATAGATTTCTCTTATTTAGTTTTAATCAGTCTCTGAATCATAAGCCA
TGGATGAATCAACTTGTTGCTGTGACTTGTCTTTCATTAGCTGCTAAAGTTGAAGAAACT
GATGTTCCTCTGCTTCTTGACCTCCAAGTTGAGAAATCAAGATTTGTGTTTGAATCTAAA
ACAATACAGAGAATGGAGATGTTGGTTCTGTCTACACTTAAATGGAAGATGAATCCAGTA
ACCCCATTTTCATTTCTTGATTTCATAACTAGAAGACTTGGATTGAAGTACTGTTTATCT
TTGGAATTTCTGAGGAGATGTGAAAAAGTGCTTCTATACACAATTACTGATGGTAGATTC
ATTGGTTACCTTCCTTCTGCAATGGCTTCTGCCACAATGTTGCATGTTCTTGATAGGCTT
AAACCTTGCATTGGAGAGAAGTACCAAGATCAACTTTTGGGCATTCTTGGAATTGTCAAG
GACAAAGTGGAAGAATGTTACAGGCTAATACAAGAAGTGGCTTGCAACATTGACTTTGAT
TCAAATAAGAGAAAGTTTGGGACATTACCAGGGAGTCCAACAGGGGTAATGGATGTGTCA
TTTAGCTCAGATTACTCCAATGACTCATGGTCAGTGGCTACATCTGTTACTTCATCACCA
GAGCCATTGTCCAAGAAGATTAGGGAGTCAAGAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014067
PEP Infomation

pacid=37472410 transcript=PGSC0003DMT400020648 locus=PGSC0003DMG400008001 ID=PGSC0003DMT400020648.v4.03 annot-version=v4.03
Sequence

MSHHYQEQEEQKIPFLLDSLYCEEDILTEVSVETESFSSHDLLWEEEELTSLFSKETEYE
ISYNVLEKDQSFISARRESVEWILKTTAYYSFSAQTAFLAVNYFDRFLLFSFNQSLNHKP
WMNQLVAVTCLSLAAKVEETDVPLLLDLQVEKSRFVFESKTIQRMEMLVLSTLKWKMNPV
TPFSFLDFITRRLGLKYCLSLEFLRRCEKVLLYTITDGRFIGYLPSAMASATMLHVLDRL
KPCIGEKYQDQLLGILGIVKDKVEECYRLIQEVACNIDFDSNKRKFGTLPGSPTGVMDVS
FSSDYSNDSWSVATSVTSSPEPLSKKIRESRE*

Transcript Sequence

Transcript ID

PGSC0003DMT400020648
Transcript Infomation

pacid=37472410 locus=PGSC0003DMG400008001 ID=PGSC0003DMT400020648.v4.03 annot-version=v4.03
Sequence

ATGTCTCACCATTATCAAGAACAAGAAGAACAAAAGATCCCATTTTTATTAGATTCACTT
TACTGTGAAGAAGATATTCTCACTGAAGTATCAGTAGAAACAGAGAGTTTTTCTTCACAT
GACTTGTTATGGGAAGAAGAAGAACTTACCTCTCTGTTTTCTAAAGAAACAGAGTATGAA
ATAAGCTACAATGTGTTAGAAAAAGACCAATCTTTTATTTCAGCAAGAAGAGAATCAGTT
GAGTGGATACTCAAAACAACTGCTTATTACTCATTTTCTGCACAAACTGCATTTCTTGCA
GTTAATTACTTTGATAGATTTCTCTTATTTAGTTTTAATCAGTCTCTGAATCATAAGCCA
TGGATGAATCAACTTGTTGCTGTGACTTGTCTTTCATTAGCTGCTAAAGTTGAAGAAACT
GATGTTCCTCTGCTTCTTGACCTCCAAGTTGAGAAATCAAGATTTGTGTTTGAATCTAAA
ACAATACAGAGAATGGAGATGTTGGTTCTGTCTACACTTAAATGGAAGATGAATCCAGTA
ACCCCATTTTCATTTCTTGATTTCATAACTAGAAGACTTGGATTGAAGTACTGTTTATCT
TTGGAATTTCTGAGGAGATGTGAAAAAGTGCTTCTATACACAATTACTGATGGTAGATTC
ATTGGTTACCTTCCTTCTGCAATGGCTTCTGCCACAATGTTGCATGTTCTTGATAGGCTT
AAACCTTGCATTGGAGAGAAGTACCAAGATCAACTTTTGGGCATTCTTGGAATTGTCAAG
GACAAAGTGGAAGAATGTTACAGGCTAATACAAGAAGTGGCTTGCAACATTGACTTTGAT
TCAAATAAGAGAAAGTTTGGGACATTACCAGGGAGTCCAACAGGGGTAATGGATGTGTCA
TTTAGCTCAGATTACTCCAATGACTCATGGTCAGTGGCTACATCTGTTACTTCATCACCA
GAGCCATTGTCCAAGAAGATTAGGGAGTCAAGAGAATGA