Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020645
CDS Infomation

pacid=37475614 polypeptide=PGSC0003DMP400014064 locus=PGSC0003DMG400007999 ID=PGSC0003DMT400020645.v4.03 annot-version=v4.03
Sequence

ATGGAGAGGCTGGAGAAAAGAGTAGCGAGGTTCATGCAAGTTACAATGCAAGCTCATGTA
CTTGCGGATGTTCATCATGTTAGGTTTAATATGGAGCAGAGATTTGACGTGCTTGAGCAT
AGGCTTAAAGCTATAAAAATCGGAGTTGACGATAAAAGTGGTGGTGGTGGTGGAGGAGGA
GGGTGTTTAGGGGAAGCTGTGAAAAGAATGGAAGAAGATGAGAAATGGTTTGAGAATAGT
TTTGTAAATTTAGGTGCTGGGATTGAATTGGGGAAGAGGAAAGTGAAGGAGATGCTGATG
GGTGAACAGGATAGAGGTGTGTTTGAGATTTGTGGAATTGGGGGTAGTGGCAAAACTACC
TTGGCTAAAGAGATTTGTAAAGATGATCAAGTTAAAAGTTATTTCAAGGACAAGATTTTC
TTTTTCACTGTTTCTCAATCTCCAAACGTGGAGCAATTAAGGAAAATGATTTGGGAAAAG
ATATCAGGGTGCAATCTCCATGGTTATGGACACGGGGAGATGTTACCCCAGTGGAACCTA
CAGTACCAATGGAATACGAAATCTGCATCCCCAGTACTCTTGATTCTTGATGATGTGTGG
TCTGCATCTGTGCTAGAGCCACTAATTTTCAAGATCCCCGGCTGCAAGATCCTAGTTGTA
TCGCGTATCAAGTTTCCTCCATCAATCATTGACTGTATTTATGATTTAGAGTTGTTAAAG
GAAGATGAAGCTATGCCCTTATTTTGCCATTTTGCATTTGGACACAATTCCTTTCCGCGT
GGTTTCAGCCAAAAGCTTGTCAAAGAGATTGTGGATGAATGTGAAGGGCTTCCTTTGGCT
CTTAAGGTCATTGGATCTTCATTAAAGGGAAAACCTGAGATGTTCTGGATAAGTGCAAAA
AACAGATTATCACGATGCCAACCTGTCTGCGAGTCTCATGAACTGCAGTTGCTTGAGCGA
ATGAAATTGAGTATTGACTGTTTGCCTGAGAAGGTGAGAGAGTGTTTCCTGGACTTGGGT
GCTTTCCCAGAAGACAAAAGGATTCCTCTTGATGTTCTAATTAACATGTGGGTGGAGCTA
CATGATATTGATGAGGAGGAGGCTTTTCACATTCTTGTTGAACTTTCAGACAAAAATCTC
CTAAATCTAGTCAAAGATGCACGAGCTGGAGACATGTATACAAGTTACTATGAGATATCG
GTGTTTCAGCATGATGTATTACGAGACCTAGCAATTCATATGAGCAACCGTGATGATATA
AATCAGAGAAAGCGATTGGTTATGCCACGAAGAGACGTAAACTTTCCAAGAGAATGGGAA
AGAAATGTGGACAAACCTTTCCATGCACGAGTTATCTCTGTGCATACAGATGAAATGAGA
GAAATGGACTGGTTCAGAATGGATTGCCCGAAAGCTGAAGTACTGATTCTCAATTTTGCC
TCATCTGAGTACTTCTTGCCTCCTTTCCTGGAGAATATGCCAAAGCTAAGGGCATTGATA
ATCATAAACTATAGTGCTGGCAATGCAGTTCTTCATAACATGTCTGTATTCAGTCATTTA
ACCAACTTGAGAAGCCTTTGGTTTGAGAAGATATCTGTCACTCACTTATCTGACTCCACA
AATCCTCTCAATAACTTGCGGAAGATATCTCTAGTGCTTTGTGACATGAAAAACAGCTTA
GATGAGTCAGATGTGGACCTCCCTGGTTTGTTCCCACAGCTTTCTGAGTTCACAATGGAT
CATTGCATCAACTTCAATAAGCTGCCATCAAGTATTTGCCGGTTGCATAAGCTCAACAGC
CTTAGTATCACTAATTGTGATAGTCTTTATGAACTTCCATCTGATTTAGGTGAATTACAA
ACTCTACAAGTTATAAGGATATATGCCTGCCCACATCTGAAAAGGCTTCCCCCGGGAATT
GGTCATCTGGTAAAGCTGAAGTACCTTGACATTTCACAATGTGTTGGTTTGAGATGTCTC
CCTGAAGCAATTGGTTGCTGTAGAAACTTGGAGAAGATTGATATGAGGGAGTGCCCTCAA
ATTGACAGTTTGCCAAGCGCTCTATCCTTTCTTGAATCATTACGTTGTGTTATTTGTGAC
GAAGAAGTTTTTTGTCAATGGAAAGATGTTGAGAAGGCTGTACCAGGTCTCTGTGTACAG
GTTGCCGAGGAGTGCTATACTCTTGATTGGCTATCTCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014064
PEP Infomation

pacid=37475614 transcript=PGSC0003DMT400020645 locus=PGSC0003DMG400007999 ID=PGSC0003DMT400020645.v4.03 annot-version=v4.03
Sequence

MERLEKRVARFMQVTMQAHVLADVHHVRFNMEQRFDVLEHRLKAIKIGVDDKSGGGGGGG
GCLGEAVKRMEEDEKWFENSFVNLGAGIELGKRKVKEMLMGEQDRGVFEICGIGGSGKTT
LAKEICKDDQVKSYFKDKIFFFTVSQSPNVEQLRKMIWEKISGCNLHGYGHGEMLPQWNL
QYQWNTKSASPVLLILDDVWSASVLEPLIFKIPGCKILVVSRIKFPPSIIDCIYDLELLK
EDEAMPLFCHFAFGHNSFPRGFSQKLVKEIVDECEGLPLALKVIGSSLKGKPEMFWISAK
NRLSRCQPVCESHELQLLERMKLSIDCLPEKVRECFLDLGAFPEDKRIPLDVLINMWVEL
HDIDEEEAFHILVELSDKNLLNLVKDARAGDMYTSYYEISVFQHDVLRDLAIHMSNRDDI
NQRKRLVMPRRDVNFPREWERNVDKPFHARVISVHTDEMREMDWFRMDCPKAEVLILNFA
SSEYFLPPFLENMPKLRALIIINYSAGNAVLHNMSVFSHLTNLRSLWFEKISVTHLSDST
NPLNNLRKISLVLCDMKNSLDESDVDLPGLFPQLSEFTMDHCINFNKLPSSICRLHKLNS
LSITNCDSLYELPSDLGELQTLQVIRIYACPHLKRLPPGIGHLVKLKYLDISQCVGLRCL
PEAIGCCRNLEKIDMRECPQIDSLPSALSFLESLRCVICDEEVFCQWKDVEKAVPGLCVQ
VAEECYTLDWLSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400020645
Transcript Infomation

pacid=37475614 locus=PGSC0003DMG400007999 ID=PGSC0003DMT400020645.v4.03 annot-version=v4.03
Sequence

ATGGAGAGGCTGGAGAAAAGAGTAGCGAGGTTCATGCAAGTTACAATGCAAGCTCATGTA
CTTGCGGATGTTCATCATGTTAGGTTTAATATGGAGCAGAGATTTGACGTGCTTGAGCAT
AGGCTTAAAGCTATAAAAATCGGAGTTGACGATAAAAGTGGTGGTGGTGGTGGAGGAGGA
GGGTGTTTAGGGGAAGCTGTGAAAAGAATGGAAGAAGATGAGAAATGGTTTGAGAATAGT
TTTGTAAATTTAGGTGCTGGGATTGAATTGGGGAAGAGGAAAGTGAAGGAGATGCTGATG
GGTGAACAGGATAGAGGTGTGTTTGAGATTTGTGGAATTGGGGGTAGTGGCAAAACTACC
TTGGCTAAAGAGATTTGTAAAGATGATCAAGTTAAAAGTTATTTCAAGGACAAGATTTTC
TTTTTCACTGTTTCTCAATCTCCAAACGTGGAGCAATTAAGGAAAATGATTTGGGAAAAG
ATATCAGGGTGCAATCTCCATGGTTATGGACACGGGGAGATGTTACCCCAGTGGAACCTA
CAGTACCAATGGAATACGAAATCTGCATCCCCAGTACTCTTGATTCTTGATGATGTGTGG
TCTGCATCTGTGCTAGAGCCACTAATTTTCAAGATCCCCGGCTGCAAGATCCTAGTTGTA
TCGCGTATCAAGTTTCCTCCATCAATCATTGACTGTATTTATGATTTAGAGTTGTTAAAG
GAAGATGAAGCTATGCCCTTATTTTGCCATTTTGCATTTGGACACAATTCCTTTCCGCGT
GGTTTCAGCCAAAAGCTTGTCAAAGAGATTGTGGATGAATGTGAAGGGCTTCCTTTGGCT
CTTAAGGTCATTGGATCTTCATTAAAGGGAAAACCTGAGATGTTCTGGATAAGTGCAAAA
AACAGATTATCACGATGCCAACCTGTCTGCGAGTCTCATGAACTGCAGTTGCTTGAGCGA
ATGAAATTGAGTATTGACTGTTTGCCTGAGAAGGTGAGAGAGTGTTTCCTGGACTTGGGT
GCTTTCCCAGAAGACAAAAGGATTCCTCTTGATGTTCTAATTAACATGTGGGTGGAGCTA
CATGATATTGATGAGGAGGAGGCTTTTCACATTCTTGTTGAACTTTCAGACAAAAATCTC
CTAAATCTAGTCAAAGATGCACGAGCTGGAGACATGTATACAAGTTACTATGAGATATCG
GTGTTTCAGCATGATGTATTACGAGACCTAGCAATTCATATGAGCAACCGTGATGATATA
AATCAGAGAAAGCGATTGGTTATGCCACGAAGAGACGTAAACTTTCCAAGAGAATGGGAA
AGAAATGTGGACAAACCTTTCCATGCACGAGTTATCTCTGTGCATACAGATGAAATGAGA
GAAATGGACTGGTTCAGAATGGATTGCCCGAAAGCTGAAGTACTGATTCTCAATTTTGCC
TCATCTGAGTACTTCTTGCCTCCTTTCCTGGAGAATATGCCAAAGCTAAGGGCATTGATA
ATCATAAACTATAGTGCTGGCAATGCAGTTCTTCATAACATGTCTGTATTCAGTCATTTA
ACCAACTTGAGAAGCCTTTGGTTTGAGAAGATATCTGTCACTCACTTATCTGACTCCACA
AATCCTCTCAATAACTTGCGGAAGATATCTCTAGTGCTTTGTGACATGAAAAACAGCTTA
GATGAGTCAGATGTGGACCTCCCTGGTTTGTTCCCACAGCTTTCTGAGTTCACAATGGAT
CATTGCATCAACTTCAATAAGCTGCCATCAAGTATTTGCCGGTTGCATAAGCTCAACAGC
CTTAGTATCACTAATTGTGATAGTCTTTATGAACTTCCATCTGATTTAGGTGAATTACAA
ACTCTACAAGTTATAAGGATATATGCCTGCCCACATCTGAAAAGGCTTCCCCCGGGAATT
GGTCATCTGGTAAAGCTGAAGTACCTTGACATTTCACAATGTGTTGGTTTGAGATGTCTC
CCTGAAGCAATTGGTTGCTGTAGAAACTTGGAGAAGATTGATATGAGGGAGTGCCCTCAA
ATTGACAGTTTGCCAAGCGCTCTATCCTTTCTTGAATCATTACGTTGTGTTATTTGTGAC
GAAGAAGTTTTTTGTCAATGGAAAGATGTTGAGAAGGCTGTACCAGGTCTCTGTGTACAG
GTTGCCGAGGAGTGCTATACTCTTGATTGGCTATCTCAGTAA