Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020641
CDS Infomation

pacid=37474046 polypeptide=PGSC0003DMP400014060 locus=PGSC0003DMG400007998 ID=PGSC0003DMT400020641.v4.03 annot-version=v4.03
Sequence

ATGGCAGTAGCAGCAGCCGCCCGTTCCTCCGCCGTATTCAAACGGGCAGCTTCAACCGCC
GCCCAAGTTCTCCGACACCAGAACTTCTACTCAGCGGCGGCGGCAGCGGATATTCACCGG
CCGGGGGATTTCTACTGTGACGATAGTGAAGGCGAAGAAAGTGCAGTGTATCAGCATACC
CTCAAATTCCAACGCCCGTCAACCATAAAACAATACCAGCTTCTCCATAACTCCGTCAGT
CTCATAGGAAAAATTGATTACCCGTTCAAAAGAGTTAACACTAAAAACGGCTCTTTTGGG
GTTCATACTTTACTCAGTGTCTCCGGTTCTTCTCAATCCCGTCCGTCTTTTAAAGTTATG
TTGAAGATGTGGGATGAAATGGCGGAAGTGTCAATGGAGCATTTGAAATCAAACGACTTG
GTATATGTTTGGGGTCATTTGGGATCATACACCAAGACTGATGAGAATGGTAAACAGAAG
ATGAGATACCAGGTAGATGTGAACGAAATAAATTTCGTGACTCCAGATGTTCAAGCCTTA
GCAACCCCAGAATTTCAGAAGAAAGAATCAAGAGGTGAAGATGAATTGGAGAACTACAGG
AACCGGATCCAATTGTGGCAAATTTTCTTCGCTAGCCCTTTTGAATGGATGGACTTCAGG
AAGAGTAAAGTCAATCCTAAATACCCAGACTTTAAGAACAGAGATACTGGTGAAGTTCTC
TGGCTCAGGACAGATGATCCACCATGGATAAAAAGACAGTTGGATATCCTAGATTCAAGA
TTTTCTTACGAAAGTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014060
PEP Infomation

pacid=37474046 transcript=PGSC0003DMT400020641 locus=PGSC0003DMG400007998 ID=PGSC0003DMT400020641.v4.03 annot-version=v4.03
Sequence

MAVAAAARSSAVFKRAASTAAQVLRHQNFYSAAAAADIHRPGDFYCDDSEGEESAVYQHT
LKFQRPSTIKQYQLLHNSVSLIGKIDYPFKRVNTKNGSFGVHTLLSVSGSSQSRPSFKVM
LKMWDEMAEVSMEHLKSNDLVYVWGHLGSYTKTDENGKQKMRYQVDVNEINFVTPDVQAL
ATPEFQKKESRGEDELENYRNRIQLWQIFFASPFEWMDFRKSKVNPKYPDFKNRDTGEVL
WLRTDDPPWIKRQLDILDSRFSYESF*

Transcript Sequence

Transcript ID

PGSC0003DMT400020641
Transcript Infomation

pacid=37474046 locus=PGSC0003DMG400007998 ID=PGSC0003DMT400020641.v4.03 annot-version=v4.03
Sequence

ATGGCAGTAGCAGCAGCCGCCCGTTCCTCCGCCGTATTCAAACGGGCAGCTTCAACCGCC
GCCCAAGTTCTCCGACACCAGAACTTCTACTCAGCGGCGGCGGCAGCGGATATTCACCGG
CCGGGGGATTTCTACTGTGACGATAGTGAAGGCGAAGAAAGTGCAGTGTATCAGCATACC
CTCAAATTCCAACGCCCGTCAACCATAAAACAATACCAGCTTCTCCATAACTCCGTCAGT
CTCATAGGAAAAATTGATTACCCGTTCAAAAGAGTTAACACTAAAAACGGCTCTTTTGGG
GTTCATACTTTACTCAGTGTCTCCGGTTCTTCTCAATCCCGTCCGTCTTTTAAAGTTATG
TTGAAGATGTGGGATGAAATGGCGGAAGTGTCAATGGAGCATTTGAAATCAAACGACTTG
GTATATGTTTGGGGTCATTTGGGATCATACACCAAGACTGATGAGAATGGTAAACAGAAG
ATGAGATACCAGGTAGATGTGAACGAAATAAATTTCGTGACTCCAGATGTTCAAGCCTTA
GCAACCCCAGAATTTCAGAAGAAAGAATCAAGAGGTGAAGATGAATTGGAGAACTACAGG
AACCGGATCCAATTGTGGCAAATTTTCTTCGCTAGCCCTTTTGAATGGATGGACTTCAGG
AAGAGTAAAGTCAATCCTAAATACCCAGACTTTAAGAACAGAGATACTGGTGAAGTTCTC
TGGCTCAGGACAGATGATCCACCATGGATAAAAAGACAGTTGGATATCCTAGATTCAAGA
TTTTCTTACGAAAGTTTCTAA