Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020613
CDS Infomation

pacid=37474657 polypeptide=PGSC0003DMP400014045 locus=PGSC0003DMG400007988 ID=PGSC0003DMT400020613.v4.03 annot-version=v4.03
Sequence

ATGCTTCGACTTCTCTGCAGAACAAGCAGCCGGTGTTGTATCCGTTTACCTCGCCGTCGT
TTCCTCTCTTCTTCTCGTAATCCCGAGGATTCCGTCGATATCCCTAACAATATCAATAAC
CCCCATCTTGTCCCTTCCCCTAAATACCCTCCAATTCGGCAACCCCATCACCCTACTTCT
CTGTCACGTTACTCTGTTTTTGCTTTATCGGCGACCCTGTTAACCGCCATTGTTTCTTCT
TGTGCTGTTGTTTTGACACGAGATGATGAAGAGGAGAAAGGGGAGGGAAGTGGTGAAGGT
ATTAGAATATATGATGAAATTGAGAATGTGGTGGGGAAATCGAATGAGTCGTTGATTAGG
ATTGTGGATAGGATGAAGAAGACAGGGGCAGCAGCTTCTGTATTATGGAAGTCGTTGAGG
TCAGTTATGTCTTCGGCGAATCATGAGGTTCGGGTCGGGTTTGAGCTTAGGGTTGCGGCT
TTGCTAGCCGACATTGCTGCCGCTAGCGAGAGTAGGAGGGCGGCGCTTGTTGCTGCTGGC
GGTGGCGGGGTGGTGGATTGGCTTCTGGAGACGGTGGCGATGTCAGGGGAGAATTGTTGG
ACCCAGGCTGAGGCTGCAAGGGCTTTGGCCTATTTGATTGCTGATCCTAATGTGTGTGAG
GATGTTTTAGGAAGGCCTCATGCTGTGCCATATCTTCTTAGGTTTATTTTCTCTGCTCAG
CCTCGGCAATCGAAAAAGTATACAAGACGTAGTTCATTCGATCTTTCTGATTCCTTGAAA
GGTAGGAGCATGCTGGTTGCAGCAATTATGGATGTTGTCACTTCCCATTGTGAAAGTGCA
GACAAGCTTTCATTCAAACCTACACTACCCAAAGATGCTGAGATGAGAGATATTGCTGCA
GCTATTGAAGTAATTGAGGAAGGTGGTATGCACTGGGATGAGCCTCATGGGGAGGATGAT
GATGGTGGAGAAGGGATGAAGGGTATTGGGATGAAAATTCTTGAAGGCACGACTGCTGTA
GGACTTTCAAGAACTAATGGGCTTGTAGAGATGGGGCCTCCTAATACTAGCCAGACAGTG
AAAAATACGCCTAGTAATCTCTTGTTTAACAACATAAGTGATAGTTCATCAGCACGATCA
AGTTTGTCTTCTGCTGTGGTTCCTGGCCTTTGGGATGATTTGCATTCTGAACAAGTCGCC
ATTCCTTTTGCTGCTTGGGCATTAGCAAATTGGGCAATGGCTTCGGAAGTTAATAGGTAT
CATATTCAAGAATTGGATCAAGAGGGACATGTGGTCATGGCTGCTTTAGTAGCACCTGAG
AGATCTGTGAAATGGCATGGAAGTCTGATGGTTAAGTTGCTTCTTGAAGACCACAATCTG
CCGCTAAGTACTTCTGTTTCTGATTGGACTTCTAGTCTTCTGTCTACTGTTTCACATGCA
AGTAAAACTCAGGACATCCCACTAGCTCAGATAGCGTTGTCTGCATTTTTGATTTCTCTT
GAGCGAAGCCCTTCAGCGCAGGAGGTAGTAGTGGAAAAGGGTCTTCATTTAATGAGAGAG
GCTGCTAAACAGACCACAAAGCATTCTTCGGTGCAAGAAGCATTGGCTAAGGCTTTGGAG
TTGCTCTGTGCTAGGGAATGGCATATGTCCCTGGAAGAAAGCCAGCATTGGGCTGGAGTT
CTGCTCCCTTGGGTCTTTGGGCAGCCGTCCTCTGATGCTATAAGATCTTCAGCAATAAAT
ATCCTAACGCGCATTCTTGAAGATTATGGACCATCCTCCATACCAATTTCTCAGGGATGG
TTAACTATTATGCTAAGTGATGTTCTGGAATCCAAGAAAACAGCATTAAGCAAAGGAAAT
AACCAACCAAAAAGTGATAAAGTGAAGACCCAAGTTGATCAAGCAAATGTAGTTTTGGCC
ACACAAACTGCTAATCAGTTGGCTGGAGCAGTTGTCAATTTAGTAGGAACGCAACTAGGA
AGAGTTGCCAATGCTGATGATACACATCCCTTGGCAGATCTTCTTTCCCTTGAACCTTTT
GCTGGGCCACTAAAAAATCTTAAGAAAGACAAACTGCCTAAGATCAATGCTGCAGATTCT
GCAGTGGCCACACTGAAAGGGATTAAAGCACTGACAGAAATATGTGCTGAAGATACTCCT
TGTCAGAACAAAATAGCTGATTATGGAGGCCTCTGTTTGCTTAGGCGCTTGTTACTGGAT
GATGATTATGAACAACTGGCTGCTATAGAAGCATATGATGCGTCACGAGCATCGGAGGGA
CAGGATCGGGTGTCAACCGTTCCTGGTGAAGCTTCTACTACTGCGAATCAGAATGATGCA
TCCAGTCTACGTGTTCCACCTACCGGTCATATTCGGAAGCATGCAGCACGGTTGCTAAAT
GTACTTTCAGTTCTTCCAAAAATCAAGAAAGAACTAGTTGGAGATAAAGAGTGGTGTGAA
TGGCTTGAAGAATGTGCTAACGGAGGGATTCCTGGTTGCAATGACCCTAAAATTCGAAGT
TATGCGAGGGCAACACTTTTGAACATATTCTGTGATGATGAAGCTGGTGAAGATTCTGTA
GATGGTGATGTTCTTCATGGAAATGTTTCTAACAAAGAACAAACTTGCCCTCGTTACGCT
GATATGATACTCCTGATAAATCCTGAATTACCGCACTGGAAATGTGTAGAAAAGATTATG
CCAAAATCAGTGGATGGGTCATCTCCAGGTGCCAATGATTCTGCTGGGAGTGAGTGTACA
ACAAATGAAGATATCAATATTGATATAACATCGACATCTGCTAGTGAATCAGAGAATATC
TCACAATTTGAAGTACCTTTAGTTGATGTTGTCTTTATTCACGGCTTGCGTGGGGGACCC
TTCAAAACTTGGCGGTTGTCAGATGACAAGTCTTCAACCAAATCTGGCCTGGTTGAGAAA
ATTGATGAAGAGGCTGGAAGGGAAGGAACATTTTGGCCTGGTGAATGGCTTCCATCTGAT
TTTCCTCATGCCCGTCTGTTTAGTGTCAAGTACAAGAGCAGTCTAACCCAGTGGTCCGGG
GCAAGCCTACCTCTTCAGGAAGTAAGTGCCATGCTGTTGGAGAAGCTTGTTGCTGCAGGC
ATCGGCAATCGACCAGTTGTATTCATTTCACATAGCATGGGTGGCCTCGTTGTCAAGCAG
ATGTTGTATCAAGCAAAAGCAGAAAAGAAGGATAACTTTGTCAAGAATACAATTGGAGTT
GTATTCTACAGCTGTCCTCATTTTGGCAGCAAACTTGCAGACATGCCCTGGAGAATGGGT
TTTGTTTTCCGCCCTGCACCCACTATTGGGGAGCTGAGAAGTGGATCTCCAAGATTGGTT
GAGCTAAATGATTTCATGGGACAGCTTCATAAGAAAGGAAAGCTTGAGGTCCTCAGTTTC
TGCGAGACAAAGGTAACTCCAATTGTTGAAGGCTATGGAGGCTGGGCTTTCCGAATGGAA
ATTGTACCATTAGAGTCAGCATATCCCGGATTTGGAGAACTAGTTGTTTTGGAGTCAACT
GATCATATCAATTCCTGCAAGCCTTTGAGTCGCAGCGATCCTTCTTATAAAGAGACACTA
GAGTTCTTGCACAAATTGAAAGCTCTTAGTAAACGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014045
PEP Infomation

pacid=37474657 transcript=PGSC0003DMT400020613 locus=PGSC0003DMG400007988 ID=PGSC0003DMT400020613.v4.03 annot-version=v4.03
Sequence

MLRLLCRTSSRCCIRLPRRRFLSSSRNPEDSVDIPNNINNPHLVPSPKYPPIRQPHHPTS
LSRYSVFALSATLLTAIVSSCAVVLTRDDEEEKGEGSGEGIRIYDEIENVVGKSNESLIR
IVDRMKKTGAAASVLWKSLRSVMSSANHEVRVGFELRVAALLADIAAASESRRAALVAAG
GGGVVDWLLETVAMSGENCWTQAEAARALAYLIADPNVCEDVLGRPHAVPYLLRFIFSAQ
PRQSKKYTRRSSFDLSDSLKGRSMLVAAIMDVVTSHCESADKLSFKPTLPKDAEMRDIAA
AIEVIEEGGMHWDEPHGEDDDGGEGMKGIGMKILEGTTAVGLSRTNGLVEMGPPNTSQTV
KNTPSNLLFNNISDSSSARSSLSSAVVPGLWDDLHSEQVAIPFAAWALANWAMASEVNRY
HIQELDQEGHVVMAALVAPERSVKWHGSLMVKLLLEDHNLPLSTSVSDWTSSLLSTVSHA
SKTQDIPLAQIALSAFLISLERSPSAQEVVVEKGLHLMREAAKQTTKHSSVQEALAKALE
LLCAREWHMSLEESQHWAGVLLPWVFGQPSSDAIRSSAINILTRILEDYGPSSIPISQGW
LTIMLSDVLESKKTALSKGNNQPKSDKVKTQVDQANVVLATQTANQLAGAVVNLVGTQLG
RVANADDTHPLADLLSLEPFAGPLKNLKKDKLPKINAADSAVATLKGIKALTEICAEDTP
CQNKIADYGGLCLLRRLLLDDDYEQLAAIEAYDASRASEGQDRVSTVPGEASTTANQNDA
SSLRVPPTGHIRKHAARLLNVLSVLPKIKKELVGDKEWCEWLEECANGGIPGCNDPKIRS
YARATLLNIFCDDEAGEDSVDGDVLHGNVSNKEQTCPRYADMILLINPELPHWKCVEKIM
PKSVDGSSPGANDSAGSECTTNEDINIDITSTSASESENISQFEVPLVDVVFIHGLRGGP
FKTWRLSDDKSSTKSGLVEKIDEEAGREGTFWPGEWLPSDFPHARLFSVKYKSSLTQWSG
ASLPLQEVSAMLLEKLVAAGIGNRPVVFISHSMGGLVVKQMLYQAKAEKKDNFVKNTIGV
VFYSCPHFGSKLADMPWRMGFVFRPAPTIGELRSGSPRLVELNDFMGQLHKKGKLEVLSF
CETKVTPIVEGYGGWAFRMEIVPLESAYPGFGELVVLESTDHINSCKPLSRSDPSYKETL
EFLHKLKALSKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400020613
Transcript Infomation

pacid=37474657 locus=PGSC0003DMG400007988 ID=PGSC0003DMT400020613.v4.03 annot-version=v4.03
Sequence

ATGCTTCGACTTCTCTGCAGAACAAGCAGCCGGTGTTGTATCCGTTTACCTCGCCGTCGT
TTCCTCTCTTCTTCTCGTAATCCCGAGGATTCCGTCGATATCCCTAACAATATCAATAAC
CCCCATCTTGTCCCTTCCCCTAAATACCCTCCAATTCGGCAACCCCATCACCCTACTTCT
CTGTCACGTTACTCTGTTTTTGCTTTATCGGCGACCCTGTTAACCGCCATTGTTTCTTCT
TGTGCTGTTGTTTTGACACGAGATGATGAAGAGGAGAAAGGGGAGGGAAGTGGTGAAGGT
ATTAGAATATATGATGAAATTGAGAATGTGGTGGGGAAATCGAATGAGTCGTTGATTAGG
ATTGTGGATAGGATGAAGAAGACAGGGGCAGCAGCTTCTGTATTATGGAAGTCGTTGAGG
TCAGTTATGTCTTCGGCGAATCATGAGGTTCGGGTCGGGTTTGAGCTTAGGGTTGCGGCT
TTGCTAGCCGACATTGCTGCCGCTAGCGAGAGTAGGAGGGCGGCGCTTGTTGCTGCTGGC
GGTGGCGGGGTGGTGGATTGGCTTCTGGAGACGGTGGCGATGTCAGGGGAGAATTGTTGG
ACCCAGGCTGAGGCTGCAAGGGCTTTGGCCTATTTGATTGCTGATCCTAATGTGTGTGAG
GATGTTTTAGGAAGGCCTCATGCTGTGCCATATCTTCTTAGGTTTATTTTCTCTGCTCAG
CCTCGGCAATCGAAAAAGTATACAAGACGTAGTTCATTCGATCTTTCTGATTCCTTGAAA
GGTAGGAGCATGCTGGTTGCAGCAATTATGGATGTTGTCACTTCCCATTGTGAAAGTGCA
GACAAGCTTTCATTCAAACCTACACTACCCAAAGATGCTGAGATGAGAGATATTGCTGCA
GCTATTGAAGTAATTGAGGAAGGTGGTATGCACTGGGATGAGCCTCATGGGGAGGATGAT
GATGGTGGAGAAGGGATGAAGGGTATTGGGATGAAAATTCTTGAAGGCACGACTGCTGTA
GGACTTTCAAGAACTAATGGGCTTGTAGAGATGGGGCCTCCTAATACTAGCCAGACAGTG
AAAAATACGCCTAGTAATCTCTTGTTTAACAACATAAGTGATAGTTCATCAGCACGATCA
AGTTTGTCTTCTGCTGTGGTTCCTGGCCTTTGGGATGATTTGCATTCTGAACAAGTCGCC
ATTCCTTTTGCTGCTTGGGCATTAGCAAATTGGGCAATGGCTTCGGAAGTTAATAGGTAT
CATATTCAAGAATTGGATCAAGAGGGACATGTGGTCATGGCTGCTTTAGTAGCACCTGAG
AGATCTGTGAAATGGCATGGAAGTCTGATGGTTAAGTTGCTTCTTGAAGACCACAATCTG
CCGCTAAGTACTTCTGTTTCTGATTGGACTTCTAGTCTTCTGTCTACTGTTTCACATGCA
AGTAAAACTCAGGACATCCCACTAGCTCAGATAGCGTTGTCTGCATTTTTGATTTCTCTT
GAGCGAAGCCCTTCAGCGCAGGAGGTAGTAGTGGAAAAGGGTCTTCATTTAATGAGAGAG
GCTGCTAAACAGACCACAAAGCATTCTTCGGTGCAAGAAGCATTGGCTAAGGCTTTGGAG
TTGCTCTGTGCTAGGGAATGGCATATGTCCCTGGAAGAAAGCCAGCATTGGGCTGGAGTT
CTGCTCCCTTGGGTCTTTGGGCAGCCGTCCTCTGATGCTATAAGATCTTCAGCAATAAAT
ATCCTAACGCGCATTCTTGAAGATTATGGACCATCCTCCATACCAATTTCTCAGGGATGG
TTAACTATTATGCTAAGTGATGTTCTGGAATCCAAGAAAACAGCATTAAGCAAAGGAAAT
AACCAACCAAAAAGTGATAAAGTGAAGACCCAAGTTGATCAAGCAAATGTAGTTTTGGCC
ACACAAACTGCTAATCAGTTGGCTGGAGCAGTTGTCAATTTAGTAGGAACGCAACTAGGA
AGAGTTGCCAATGCTGATGATACACATCCCTTGGCAGATCTTCTTTCCCTTGAACCTTTT
GCTGGGCCACTAAAAAATCTTAAGAAAGACAAACTGCCTAAGATCAATGCTGCAGATTCT
GCAGTGGCCACACTGAAAGGGATTAAAGCACTGACAGAAATATGTGCTGAAGATACTCCT
TGTCAGAACAAAATAGCTGATTATGGAGGCCTCTGTTTGCTTAGGCGCTTGTTACTGGAT
GATGATTATGAACAACTGGCTGCTATAGAAGCATATGATGCGTCACGAGCATCGGAGGGA
CAGGATCGGGTGTCAACCGTTCCTGGTGAAGCTTCTACTACTGCGAATCAGAATGATGCA
TCCAGTCTACGTGTTCCACCTACCGGTCATATTCGGAAGCATGCAGCACGGTTGCTAAAT
GTACTTTCAGTTCTTCCAAAAATCAAGAAAGAACTAGTTGGAGATAAAGAGTGGTGTGAA
TGGCTTGAAGAATGTGCTAACGGAGGGATTCCTGGTTGCAATGACCCTAAAATTCGAAGT
TATGCGAGGGCAACACTTTTGAACATATTCTGTGATGATGAAGCTGGTGAAGATTCTGTA
GATGGTGATGTTCTTCATGGAAATGTTTCTAACAAAGAACAAACTTGCCCTCGTTACGCT
GATATGATACTCCTGATAAATCCTGAATTACCGCACTGGAAATGTGTAGAAAAGATTATG
CCAAAATCAGTGGATGGGTCATCTCCAGGTGCCAATGATTCTGCTGGGAGTGAGTGTACA
ACAAATGAAGATATCAATATTGATATAACATCGACATCTGCTAGTGAATCAGAGAATATC
TCACAATTTGAAGTACCTTTAGTTGATGTTGTCTTTATTCACGGCTTGCGTGGGGGACCC
TTCAAAACTTGGCGGTTGTCAGATGACAAGTCTTCAACCAAATCTGGCCTGGTTGAGAAA
ATTGATGAAGAGGCTGGAAGGGAAGGAACATTTTGGCCTGGTGAATGGCTTCCATCTGAT
TTTCCTCATGCCCGTCTGTTTAGTGTCAAGTACAAGAGCAGTCTAACCCAGTGGTCCGGG
GCAAGCCTACCTCTTCAGGAAGTAAGTGCCATGCTGTTGGAGAAGCTTGTTGCTGCAGGC
ATCGGCAATCGACCAGTTGTATTCATTTCACATAGCATGGGTGGCCTCGTTGTCAAGCAG
ATGTTGTATCAAGCAAAAGCAGAAAAGAAGGATAACTTTGTCAAGAATACAATTGGAGTT
GTATTCTACAGCTGTCCTCATTTTGGCAGCAAACTTGCAGACATGCCCTGGAGAATGGGT
TTTGTTTTCCGCCCTGCACCCACTATTGGGGAGCTGAGAAGTGGATCTCCAAGATTGGTT
GAGCTAAATGATTTCATGGGACAGCTTCATAAGAAAGGAAAGCTTGAGGTCCTCAGTTTC
TGCGAGACAAAGGTAACTCCAATTGTTGAAGGCTATGGAGGCTGGGCTTTCCGAATGGAA
ATTGTACCATTAGAGTCAGCATATCCCGGATTTGGAGAACTAGTTGTTTTGGAGTCAACT
GATCATATCAATTCCTGCAAGCCTTTGAGTCGCAGCGATCCTTCTTATAAAGAGACACTA
GAGTTCTTGCACAAATTGAAAGCTCTTAGTAAACGATGA