Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020562
CDS Infomation

pacid=37474366 polypeptide=PGSC0003DMP400014012 locus=PGSC0003DMG400007966 ID=PGSC0003DMT400020562.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCTGAGTATTCCTCCAGTTTTAACTACGCCTCGCGATGATGCCATGCACCTT
TACAAAGCTTTCAAAGGATTTGGATGTGATAAAGCAGCAGTCATTAACATCCTTGCTCAT
CGTGATGCTACTCAGCGTGCTCTTATTCAACAGGAATACAGAACTATGTATTCTGAAGAC
CTAACCAAACGCTTGGTCAAAGAGCTTAGCGGTAAACTTGAGAAAGCAATCTTGCTATGG
ATGTATGATCCAGCAGGAAGGGATGCTATCCTAGTAAGGCAAGCTTTGAGTGCTGACTCC
ATTGATCTCAGAGCTGCCACTGAAGTGATATGTTCACGGACTCCTTCTCAAATAGTACAT
TTGAAACAACTTTACCATTCCATGAATGGTATCTACCTGGAGCATGATATTGCGCTTCAC
GCATCTGATGATCACAAAAAGTTGCTTCTAGCATATGTAACCACAATGCGCTATGAAGGC
CCAGAAGTTGACAGGGCTTCGGTTGATCATGATGCTAAAGCTCTTTACAAAGCTGGGGAG
AAGAAACTGGGAACTGATGAGAAGACTTTTATACGAATTTTCTCTGAAAGAAGTAGGGCA
CACCTGGCTGCTGTTAGTTCTGCTTATCACAGCATGTATTCCAGGAAGTTAAAAAAGGCT
GTAAAAAGTGAAACCTCTGGACTCTTTGAGTTTGCTCTCTTGACTATTTTGCAATGTGCT
GAGAATCCAGCAACATACTTTGCAAAGGAGTTGCACAAGGCAATGAAGGGCTTGGGGACG
AATGATACAACTCTCATTAGGATAGTAGCCACGCGAACTGAGATTGATATGCAGTATATA
AAAGCAGAGTACCAGAAAAAGCATAAGAAATCTCTTAATGATGCTGTTCATTCGGAGACT
TCTGGTGATTATCGTACCTTTCTTCTATCTCTTCTGGGGCCTGCTCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014012
PEP Infomation

pacid=37474366 transcript=PGSC0003DMT400020562 locus=PGSC0003DMG400007966 ID=PGSC0003DMT400020562.v4.03 annot-version=v4.03
Sequence

MATLSIPPVLTTPRDDAMHLYKAFKGFGCDKAAVINILAHRDATQRALIQQEYRTMYSED
LTKRLVKELSGKLEKAILLWMYDPAGRDAILVRQALSADSIDLRAATEVICSRTPSQIVH
LKQLYHSMNGIYLEHDIALHASDDHKKLLLAYVTTMRYEGPEVDRASVDHDAKALYKAGE
KKLGTDEKTFIRIFSERSRAHLAAVSSAYHSMYSRKLKKAVKSETSGLFEFALLTILQCA
ENPATYFAKELHKAMKGLGTNDTTLIRIVATRTEIDMQYIKAEYQKKHKKSLNDAVHSET
SGDYRTFLLSLLGPAH*

Transcript Sequence

Transcript ID

PGSC0003DMT400020562
Transcript Infomation

pacid=37474366 locus=PGSC0003DMG400007966 ID=PGSC0003DMT400020562.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCTGAGTATTCCTCCAGTTTTAACTACGCCTCGCGATGATGCCATGCACCTT
TACAAAGCTTTCAAAGGATTTGGATGTGATAAAGCAGCAGTCATTAACATCCTTGCTCAT
CGTGATGCTACTCAGCGTGCTCTTATTCAACAGGAATACAGAACTATGTATTCTGAAGAC
CTAACCAAACGCTTGGTCAAAGAGCTTAGCGGTAAACTTGAGAAAGCAATCTTGCTATGG
ATGTATGATCCAGCAGGAAGGGATGCTATCCTAGTAAGGCAAGCTTTGAGTGCTGACTCC
ATTGATCTCAGAGCTGCCACTGAAGTGATATGTTCACGGACTCCTTCTCAAATAGTACAT
TTGAAACAACTTTACCATTCCATGAATGGTATCTACCTGGAGCATGATATTGCGCTTCAC
GCATCTGATGATCACAAAAAGTTGCTTCTAGCATATGTAACCACAATGCGCTATGAAGGC
CCAGAAGTTGACAGGGCTTCGGTTGATCATGATGCTAAAGCTCTTTACAAAGCTGGGGAG
AAGAAACTGGGAACTGATGAGAAGACTTTTATACGAATTTTCTCTGAAAGAAGTAGGGCA
CACCTGGCTGCTGTTAGTTCTGCTTATCACAGCATGTATTCCAGGAAGTTAAAAAAGGCT
GTAAAAAGTGAAACCTCTGGACTCTTTGAGTTTGCTCTCTTGACTATTTTGCAATGTGCT
GAGAATCCAGCAACATACTTTGCAAAGGAGTTGCACAAGGCAATGAAGGGCTTGGGGACG
AATGATACAACTCTCATTAGGATAGTAGCCACGCGAACTGAGATTGATATGCAGTATATA
AAAGCAGAGTACCAGAAAAAGCATAAGAAATCTCTTAATGATGCTGTTCATTCGGAGACT
TCTGGTGATTATCGTACCTTTCTTCTATCTCTTCTGGGGCCTGCTCACTGA