Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020555
CDS Infomation

pacid=37476214 polypeptide=PGSC0003DMP400014005 locus=PGSC0003DMG400007963 ID=PGSC0003DMT400020555.v4.03 annot-version=v4.03
Sequence

ATGACGGAGCCGGAATTGGTAATCGCTTCATCGCCGACCGACGCCGGTATTGGATGTTGG
GACCTCCATACCGGCGCTGAGCACCTCCGTTATCGAACTTGCTCCTCCCCTTCCCACGGC
CTTACCTGTGTCGGCGGCCGCTTTCTCGCCTCTTCTCAACTCCGTGAAACTAAATCTTCC
TCAGGCTCTATCCTTTACTGGTCCTGGAACAAGCCTCAAGTGGAAGTTAAAAGCTTCCCA
GCGGAACCTATAAATCCACTTGTTTCCAACAGTGAGGGAACTTATATAGCCGGAGGAGGT
GCATCCGGCGAAATTTACTTGTGGCAGGTTGCTACTGGTAAACTACTTAAGAAGTGGCAT
GCTCACTATAGGGCGGTTACTTGCTTGTTATTCAATGATGATCAATCACTTCTGATTTCT
GGTTCAGAGGATGGATCAGTTCGAGTTTGGTCTCTTATAATGGTATTTGATGACTTGTTG
AGAGGGAAAGCAAGACAACCTTATGAGTTTAGTTTCTCAGAGCATTCTTTGAAGGTGACT
GATGTTGTGATTGGGTACGGCGGAGCTAATGCAATTATTGTTTCTGCTTCAGAAGATAGA
ACTTGCAAGGTTTGGAGTCTTTCTAGGGGAAAATTGTTGAGAAACATTGTGTTTCCATCA
ATAATTGACGCAATTGCATTAGACCCCGGAGAAGATGTCTTCTATGCTGGTGGTAGAGAT
GGGAAAATATACATAGCTGCACTAAATGCTGTTGCAGACCCCAATAATAATTATGGATTG
CACATTCTTGGGTTTCTCTCTGAGCAAAGCAAGGCTATTACATGCTTAGCATTAAGCACG
GATGGCAGCTTGCTAATTTCTGGATCAGAGGATGGCATGGTTCGAGTGTGGAACACCAAA
AACCATAACATCACCCGAATTTTTAGGCATGCAAAAGGTCCAATTAACAATGTTGTAGTT
GTTAGACAATCATCTCTTATGAGTAACCGAGGAACCGTGAATTCTCAAATGCCTTCCGTT
AAGAGACACGGGGTATCATTACCTCCACCATTGGAAAAGTGTGCTAATTCAGCAGATGAA
AATGACTATAAGGCAGTAATTGGCCCCCGGATCGATCCTGATAGATCTGTTGAAACTTCA
TATATCAGTATTCAGTCCCTAAAACAAAAAGAATCTCAGGCAACAATTGGGGTGAAACAA
ATGTTTATGCATTTATGGACGGACGAGACCTTCAAGGAGATCGGTGAGCTCTGTGGTGGA
TGGTTGTTGACGGAGGAGGAGACAGAACTGAGAAGCCATCTTAAATGGGCAAGGATCGAA
ATACGAGGTGATGGTCGGAGCATTCCAAGTGAAGTCTCTATTTCTAGAGATGGAACTAAA
TTCATAATTCCGATCTGGGCAGAGAGGAAAACCCTATTTGAATCCCCGCCGGAAAGCAAC
AGAACAACCACTGGAGAAGATCAACTGAAGATACAACGGATAATAGATCTCCAACCATCT
ATATCCGAGAAAGCAGAAGTACAGGTTGTCGATGTTGATGTAACAGAGGGAAATCACGTG
GAGGCAGCTGTCCAAATTTTTAAAAAACCTAAAGTAGCACGTGGACATCGCGATGGAACT
GGAAGGAAAACACCAAATCTACAGAATCTCGATGGGACCCAGCCAAGAGAAGAAGGATTT
GAAGAAGGAAAAGCAGCGGAAATCTCCTGTTTACCCATTAACAAAAGACAAGGGTCTTCT
GCTGCTGCTGAAATGGAGATCGAAAGGCTAAAACTCGACCGCAGCAGGTCCATGCAAATG
ATTCAGCAGTGGGAAACAAAGTTTCAAAGTCTACATCAGTTTTGTGTAACCGAGCTATTG
GATGGGGAAAAAGCTGGAAATGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014005
PEP Infomation

pacid=37476214 transcript=PGSC0003DMT400020555 locus=PGSC0003DMG400007963 ID=PGSC0003DMT400020555.v4.03 annot-version=v4.03
Sequence

MTEPELVIASSPTDAGIGCWDLHTGAEHLRYRTCSSPSHGLTCVGGRFLASSQLRETKSS
SGSILYWSWNKPQVEVKSFPAEPINPLVSNSEGTYIAGGGASGEIYLWQVATGKLLKKWH
AHYRAVTCLLFNDDQSLLISGSEDGSVRVWSLIMVFDDLLRGKARQPYEFSFSEHSLKVT
DVVIGYGGANAIIVSASEDRTCKVWSLSRGKLLRNIVFPSIIDAIALDPGEDVFYAGGRD
GKIYIAALNAVADPNNNYGLHILGFLSEQSKAITCLALSTDGSLLISGSEDGMVRVWNTK
NHNITRIFRHAKGPINNVVVVRQSSLMSNRGTVNSQMPSVKRHGVSLPPPLEKCANSADE
NDYKAVIGPRIDPDRSVETSYISIQSLKQKESQATIGVKQMFMHLWTDETFKEIGELCGG
WLLTEEETELRSHLKWARIEIRGDGRSIPSEVSISRDGTKFIIPIWAERKTLFESPPESN
RTTTGEDQLKIQRIIDLQPSISEKAEVQVVDVDVTEGNHVEAAVQIFKKPKVARGHRDGT
GRKTPNLQNLDGTQPREEGFEEGKAAEISCLPINKRQGSSAAAEMEIERLKLDRSRSMQM
IQQWETKFQSLHQFCVTELLDGEKAGNA*

Transcript Sequence

Transcript ID

PGSC0003DMT400020555
Transcript Infomation

pacid=37476214 locus=PGSC0003DMG400007963 ID=PGSC0003DMT400020555.v4.03 annot-version=v4.03
Sequence

ATGACGGAGCCGGAATTGGTAATCGCTTCATCGCCGACCGACGCCGGTATTGGATGTTGG
GACCTCCATACCGGCGCTGAGCACCTCCGTTATCGAACTTGCTCCTCCCCTTCCCACGGC
CTTACCTGTGTCGGCGGCCGCTTTCTCGCCTCTTCTCAACTCCGTGAAACTAAATCTTCC
TCAGGCTCTATCCTTTACTGGTCCTGGAACAAGCCTCAAGTGGAAGTTAAAAGCTTCCCA
GCGGAACCTATAAATCCACTTGTTTCCAACAGTGAGGGAACTTATATAGCCGGAGGAGGT
GCATCCGGCGAAATTTACTTGTGGCAGGTTGCTACTGGTAAACTACTTAAGAAGTGGCAT
GCTCACTATAGGGCGGTTACTTGCTTGTTATTCAATGATGATCAATCACTTCTGATTTCT
GGTTCAGAGGATGGATCAGTTCGAGTTTGGTCTCTTATAATGGTATTTGATGACTTGTTG
AGAGGGAAAGCAAGACAACCTTATGAGTTTAGTTTCTCAGAGCATTCTTTGAAGGTGACT
GATGTTGTGATTGGGTACGGCGGAGCTAATGCAATTATTGTTTCTGCTTCAGAAGATAGA
ACTTGCAAGGTTTGGAGTCTTTCTAGGGGAAAATTGTTGAGAAACATTGTGTTTCCATCA
ATAATTGACGCAATTGCATTAGACCCCGGAGAAGATGTCTTCTATGCTGGTGGTAGAGAT
GGGAAAATATACATAGCTGCACTAAATGCTGTTGCAGACCCCAATAATAATTATGGATTG
CACATTCTTGGGTTTCTCTCTGAGCAAAGCAAGGCTATTACATGCTTAGCATTAAGCACG
GATGGCAGCTTGCTAATTTCTGGATCAGAGGATGGCATGGTTCGAGTGTGGAACACCAAA
AACCATAACATCACCCGAATTTTTAGGCATGCAAAAGGTCCAATTAACAATGTTGTAGTT
GTTAGACAATCATCTCTTATGAGTAACCGAGGAACCGTGAATTCTCAAATGCCTTCCGTT
AAGAGACACGGGGTATCATTACCTCCACCATTGGAAAAGTGTGCTAATTCAGCAGATGAA
AATGACTATAAGGCAGTAATTGGCCCCCGGATCGATCCTGATAGATCTGTTGAAACTTCA
TATATCAGTATTCAGTCCCTAAAACAAAAAGAATCTCAGGCAACAATTGGGGTGAAACAA
ATGTTTATGCATTTATGGACGGACGAGACCTTCAAGGAGATCGGTGAGCTCTGTGGTGGA
TGGTTGTTGACGGAGGAGGAGACAGAACTGAGAAGCCATCTTAAATGGGCAAGGATCGAA
ATACGAGGTGATGGTCGGAGCATTCCAAGTGAAGTCTCTATTTCTAGAGATGGAACTAAA
TTCATAATTCCGATCTGGGCAGAGAGGAAAACCCTATTTGAATCCCCGCCGGAAAGCAAC
AGAACAACCACTGGAGAAGATCAACTGAAGATACAACGGATAATAGATCTCCAACCATCT
ATATCCGAGAAAGCAGAAGTACAGGTTGTCGATGTTGATGTAACAGAGGGAAATCACGTG
GAGGCAGCTGTCCAAATTTTTAAAAAACCTAAAGTAGCACGTGGACATCGCGATGGAACT
GGAAGGAAAACACCAAATCTACAGAATCTCGATGGGACCCAGCCAAGAGAAGAAGGATTT
GAAGAAGGAAAAGCAGCGGAAATCTCCTGTTTACCCATTAACAAAAGACAAGGGTCTTCT
GCTGCTGCTGAAATGGAGATCGAAAGGCTAAAACTCGACCGCAGCAGGTCCATGCAAATG
ATTCAGCAGTGGGAAACAAAGTTTCAAAGTCTACATCAGTTTTGTGTAACCGAGCTATTG
GATGGGGAAAAAGCTGGAAATGCTTAG