Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020520
CDS Infomation

pacid=37475539 polypeptide=PGSC0003DMP400013977 locus=PGSC0003DMG400007948 ID=PGSC0003DMT400020520.v4.03 annot-version=v4.03
Sequence

ATGAAAATACAACAATTCTTACTACTTACCATTCTTCTGTTTTTATCTGTTTCTTTTCAT
TCCACTGTTTCGTTGATTCCTTCTGATGCATCAGCATTGTTAGCATTCAAATATAAAGCT
GATTTGGACAACAAACTTGCATTTTCTGCTAATACAAGTTCCAGATTCTGCAAATGGAAA
GGGATACAATGCTCGGAGAAGAAAGTGATTCGTATTGTTATCGAAAGTTTTAGCTTACGA
GGTACGTTTCCAGCTAATACATTGTCTATGCTTGATCAACTCAGAGTATTGAGTTTACAG
AACAACTCACTTACCGGTCCGATTCCGGACCTTTCTCCACTTATTAATCTCAAAGTTCTT
TTCCTGGACCATAATTTGTTCACCGGTTCAATACCAGCTTCCATTTTCACTCTTCATAGG
CTTAAAACCCTTGATCTCTCCTATAATAATCTCACCGGTTCAATACCCGTTGCAATCAAC
GGGTTGAACCGGTTGTACTATCTCCGGCTTGACTCGAACCGGATAAACGGATCAATCCCA
CCGCTGAACCAATCTACCCTCCATATCTTCAACATTTCTCACAATGCCCTTTCTGGTCCT
ATTCCGGTAACGAAAACGTTATCCCGGTTTAAAACGGCGTCGTTTTCAGACAATAAAGGA
CTTTGTGGTGAGATCGTACACAAAGAATGCCGTCCAATACAACCGTTTTTCAGTCCATCC
ACCGCTGCCTCCACTAAAATTACGCCGCCGCCGTCTAAAACTCCGGCAGAACTCGGCCAA
AACGAAGAGTTACGACAGGGTAGCCCGTTAAACCGTAAAGAAAACAAATCACATAAAAGA
TCCTTACTCATTATTGGAGTTTCAACAGCTTGTTTAGTCCTTTTATGTTCAGTCATACTA
TTAGCATTAGCGTCGAAGAAGCACAGGAACTCGAAGAAATTGGGAGAAACTAAGAAATCC
GTATTCGATCCAAGTGTTAGCGGCAATGCAGAAGCAGTAATAAGAATTGAAGAAGACAAC
AATGAACTGGAAGAGAAGGTGAAGAGAGTACAACAAGGAATGCAGCAAGTGATGGGTAAA
AGTGGGAGCTTAGTATTCTGTGCAGGTGAGGTGCATGTGTATACCCTGGAGCAGCTGATG
AGAGCTTCTGCTGAGCTTTTAGGTAGAGGAACAATGGGGACTACTTACAAAGCAGTGCTT
GATAACCGTCTGATTGTATGTGTTAAGAGATTGGACGGTGGGAGATTGGCGGGTACAAGT
CAAGAAGAGTTTGAGCAGCATATGGAATCAGTGGGCGGGCTTAGGCACCCGAATTTGGTT
CCTTTTCGGGCTTATTTTCAGGCCCGACAAGAAAGGCTTTTGGTTTATGATTATCAACCC
AATGGCAGCCTGTCTTCTCTTATTCATGGTTCCAAGTCATCAAGAGCAAAGCCACTTCAC
TGGACTTCATGTCTGAAAATAGCAGAGGATGTAACTCAAGGACTTTCCTACATCCACCAA
GCATGGAGGCTTGTCCATGGCAATCTCAAGTCATCTAACGTCCTCCTCGGCTCCGATTTC
GAGGCGTGCATAACCGACTACTGTCTCTCCATCCTAGCTGTCCCCTCAGACGATGACAAT
CCTGATTCTGTAGCTTATCAGGCTCCAGAAATTCGGAAGCTGAATCACAACAACCACCAC
CACCACCGCCAAGCTAGTGCCAAGGCTGATGTCTATTCGTTTGGTGTTCTTTTGCTTGAA
CTTCTAACGGGTAAGCATCCTTCAGAACATCCATATCTAATGCCAGATGATATGTTACAT
TGGGTGAAGTCTACTAGAGAGGATCATGATGGTAGCATTGGAGAAGATAGTAAGTTGGAG
ATGCTTCTTGAAGTTGCTATGGCTTGTAGAGTGAGCTCACCAGAGCAAAGACCAACAATG
TGGCAAGTGTTAAAGATGATACAAGAGATTAAAGAAGCTGTTGTAATGGAAGATAGTAAT
GAAATGGACCTTCTCACTGGCCCTCCTAAATCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013977
PEP Infomation

pacid=37475539 transcript=PGSC0003DMT400020520 locus=PGSC0003DMG400007948 ID=PGSC0003DMT400020520.v4.03 annot-version=v4.03
Sequence

MKIQQFLLLTILLFLSVSFHSTVSLIPSDASALLAFKYKADLDNKLAFSANTSSRFCKWK
GIQCSEKKVIRIVIESFSLRGTFPANTLSMLDQLRVLSLQNNSLTGPIPDLSPLINLKVL
FLDHNLFTGSIPASIFTLHRLKTLDLSYNNLTGSIPVAINGLNRLYYLRLDSNRINGSIP
PLNQSTLHIFNISHNALSGPIPVTKTLSRFKTASFSDNKGLCGEIVHKECRPIQPFFSPS
TAASTKITPPPSKTPAELGQNEELRQGSPLNRKENKSHKRSLLIIGVSTACLVLLCSVIL
LALASKKHRNSKKLGETKKSVFDPSVSGNAEAVIRIEEDNNELEEKVKRVQQGMQQVMGK
SGSLVFCAGEVHVYTLEQLMRASAELLGRGTMGTTYKAVLDNRLIVCVKRLDGGRLAGTS
QEEFEQHMESVGGLRHPNLVPFRAYFQARQERLLVYDYQPNGSLSSLIHGSKSSRAKPLH
WTSCLKIAEDVTQGLSYIHQAWRLVHGNLKSSNVLLGSDFEACITDYCLSILAVPSDDDN
PDSVAYQAPEIRKLNHNNHHHHRQASAKADVYSFGVLLLELLTGKHPSEHPYLMPDDMLH
WVKSTREDHDGSIGEDSKLEMLLEVAMACRVSSPEQRPTMWQVLKMIQEIKEAVVMEDSN
EMDLLTGPPKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400020520
Transcript Infomation

pacid=37475539 locus=PGSC0003DMG400007948 ID=PGSC0003DMT400020520.v4.03 annot-version=v4.03
Sequence

ATGAAAATACAACAATTCTTACTACTTACCATTCTTCTGTTTTTATCTGTTTCTTTTCAT
TCCACTGTTTCGTTGATTCCTTCTGATGCATCAGCATTGTTAGCATTCAAATATAAAGCT
GATTTGGACAACAAACTTGCATTTTCTGCTAATACAAGTTCCAGATTCTGCAAATGGAAA
GGGATACAATGCTCGGAGAAGAAAGTGATTCGTATTGTTATCGAAAGTTTTAGCTTACGA
GGTACGTTTCCAGCTAATACATTGTCTATGCTTGATCAACTCAGAGTATTGAGTTTACAG
AACAACTCACTTACCGGTCCGATTCCGGACCTTTCTCCACTTATTAATCTCAAAGTTCTT
TTCCTGGACCATAATTTGTTCACCGGTTCAATACCAGCTTCCATTTTCACTCTTCATAGG
CTTAAAACCCTTGATCTCTCCTATAATAATCTCACCGGTTCAATACCCGTTGCAATCAAC
GGGTTGAACCGGTTGTACTATCTCCGGCTTGACTCGAACCGGATAAACGGATCAATCCCA
CCGCTGAACCAATCTACCCTCCATATCTTCAACATTTCTCACAATGCCCTTTCTGGTCCT
ATTCCGGTAACGAAAACGTTATCCCGGTTTAAAACGGCGTCGTTTTCAGACAATAAAGGA
CTTTGTGGTGAGATCGTACACAAAGAATGCCGTCCAATACAACCGTTTTTCAGTCCATCC
ACCGCTGCCTCCACTAAAATTACGCCGCCGCCGTCTAAAACTCCGGCAGAACTCGGCCAA
AACGAAGAGTTACGACAGGGTAGCCCGTTAAACCGTAAAGAAAACAAATCACATAAAAGA
TCCTTACTCATTATTGGAGTTTCAACAGCTTGTTTAGTCCTTTTATGTTCAGTCATACTA
TTAGCATTAGCGTCGAAGAAGCACAGGAACTCGAAGAAATTGGGAGAAACTAAGAAATCC
GTATTCGATCCAAGTGTTAGCGGCAATGCAGAAGCAGTAATAAGAATTGAAGAAGACAAC
AATGAACTGGAAGAGAAGGTGAAGAGAGTACAACAAGGAATGCAGCAAGTGATGGGTAAA
AGTGGGAGCTTAGTATTCTGTGCAGGTGAGGTGCATGTGTATACCCTGGAGCAGCTGATG
AGAGCTTCTGCTGAGCTTTTAGGTAGAGGAACAATGGGGACTACTTACAAAGCAGTGCTT
GATAACCGTCTGATTGTATGTGTTAAGAGATTGGACGGTGGGAGATTGGCGGGTACAAGT
CAAGAAGAGTTTGAGCAGCATATGGAATCAGTGGGCGGGCTTAGGCACCCGAATTTGGTT
CCTTTTCGGGCTTATTTTCAGGCCCGACAAGAAAGGCTTTTGGTTTATGATTATCAACCC
AATGGCAGCCTGTCTTCTCTTATTCATGGTTCCAAGTCATCAAGAGCAAAGCCACTTCAC
TGGACTTCATGTCTGAAAATAGCAGAGGATGTAACTCAAGGACTTTCCTACATCCACCAA
GCATGGAGGCTTGTCCATGGCAATCTCAAGTCATCTAACGTCCTCCTCGGCTCCGATTTC
GAGGCGTGCATAACCGACTACTGTCTCTCCATCCTAGCTGTCCCCTCAGACGATGACAAT
CCTGATTCTGTAGCTTATCAGGCTCCAGAAATTCGGAAGCTGAATCACAACAACCACCAC
CACCACCGCCAAGCTAGTGCCAAGGCTGATGTCTATTCGTTTGGTGTTCTTTTGCTTGAA
CTTCTAACGGGTAAGCATCCTTCAGAACATCCATATCTAATGCCAGATGATATGTTACAT
TGGGTGAAGTCTACTAGAGAGGATCATGATGGTAGCATTGGAGAAGATAGTAAGTTGGAG
ATGCTTCTTGAAGTTGCTATGGCTTGTAGAGTGAGCTCACCAGAGCAAAGACCAACAATG
TGGCAAGTGTTAAAGATGATACAAGAGATTAAAGAAGCTGTTGTAATGGAAGATAGTAAT
GAAATGGACCTTCTCACTGGCCCTCCTAAATCCTAA