Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020516
CDS Infomation

pacid=37473464 polypeptide=PGSC0003DMP400013974 locus=PGSC0003DMG400007946 ID=PGSC0003DMT400020516.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGGACTCCCCATGCTAAATTGTCTGTTACAACACACACTTAGAAGTCTCTGT
ACTTGCTCTGACTCTTCTTCTAATGCTTCTGAGTGGGTCTATGCTGTTTTCTGGAGAATT
GTCCCAAGAAATTATCCTCCACCTAAATGGGATCATGGAGGAGGCTTGCTCGATCGCGCT
AAAGGAAGCAAGAGAAACTGGATTCTTGTTTGGGAAGATGGTTTTTGTGACTTTTATGAA
TGTGAAAGATCGAAAAGGGAATATGTAACGATAAATTTTGGTCCTGAAATCTTCTTCAAA
ATGTCTCATGAGGTTTATTCTTTTGGTGAAGGATTGGTGGGCAAAGTTGCAGCAGATAAT
AGTCACAGATGGGTGTTTAAAGATGCCCCAAATGAGAAAGATTCAAACTTTATTTGCTCA
TGGAATATGTCCATTGAAGCTCAACCAAGAGTCTGGGGAGTTCAGTTTAATTCAGGCATT
CAGACTATTGCTATCATATCTGTTAGGGAAGGCATAATTCAGCTTGGCTCATTTAATAAG
GTATTTGAAGATCATAATCTAGTATTAAGCATTCAGAGGAAATTCAGCTACCTTCAGAGC
ATACCGGGCATTTATGCAATTCAGAGACCTTTTTTGCCAATCCAACATCGATATACTTAC
AAGCCAAACAATGTCACTCTAGTTAACGAGACGGATTATCAAATGGATGACAAAAACCAG
CTAATTGGGTCGAAAAGAGTTCATGAGTTTCCGTTCAAGTCTATTAACTTTGGCTATAAT
AGCCCACAAACCATGGCTAGTCTACCTTTGTGGTCGATGCCTATAGCAGCACCGTCTTGT
TATGGTAATGCAGTACATGAGATGAGTTCTTTACACGACAGAGTTACGAAGAACACTACA
AGCAAGGATGTCAAGGTTGTAGATGAATTAGGCCATTTTAAGTTTGAGACAGCTGAGGAA
AATGACCAATTTTCCTTAAACCAGAACTTAGGCCTGGAAAATAAGGTAGTTGAGGTTGGT
TTTAGACAGTTGGGAAAAGGAGGGGCTGCTCCAAATCCAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013974
PEP Infomation

pacid=37473464 transcript=PGSC0003DMT400020516 locus=PGSC0003DMG400007946 ID=PGSC0003DMT400020516.v4.03 annot-version=v4.03
Sequence

MEGGLPMLNCLLQHTLRSLCTCSDSSSNASEWVYAVFWRIVPRNYPPPKWDHGGGLLDRA
KGSKRNWILVWEDGFCDFYECERSKREYVTINFGPEIFFKMSHEVYSFGEGLVGKVAADN
SHRWVFKDAPNEKDSNFICSWNMSIEAQPRVWGVQFNSGIQTIAIISVREGIIQLGSFNK
VFEDHNLVLSIQRKFSYLQSIPGIYAIQRPFLPIQHRYTYKPNNVTLVNETDYQMDDKNQ
LIGSKRVHEFPFKSINFGYNSPQTMASLPLWSMPIAAPSCYGNAVHEMSSLHDRVTKNTT
SKDVKVVDELGHFKFETAEENDQFSLNQNLGLENKVVEVGFRQLGKGGAAPNPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400020516
Transcript Infomation

pacid=37473464 locus=PGSC0003DMG400007946 ID=PGSC0003DMT400020516.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGGACTCCCCATGCTAAATTGTCTGTTACAACACACACTTAGAAGTCTCTGT
ACTTGCTCTGACTCTTCTTCTAATGCTTCTGAGTGGGTCTATGCTGTTTTCTGGAGAATT
GTCCCAAGAAATTATCCTCCACCTAAATGGGATCATGGAGGAGGCTTGCTCGATCGCGCT
AAAGGAAGCAAGAGAAACTGGATTCTTGTTTGGGAAGATGGTTTTTGTGACTTTTATGAA
TGTGAAAGATCGAAAAGGGAATATGTAACGATAAATTTTGGTCCTGAAATCTTCTTCAAA
ATGTCTCATGAGGTTTATTCTTTTGGTGAAGGATTGGTGGGCAAAGTTGCAGCAGATAAT
AGTCACAGATGGGTGTTTAAAGATGCCCCAAATGAGAAAGATTCAAACTTTATTTGCTCA
TGGAATATGTCCATTGAAGCTCAACCAAGAGTCTGGGGAGTTCAGTTTAATTCAGGCATT
CAGACTATTGCTATCATATCTGTTAGGGAAGGCATAATTCAGCTTGGCTCATTTAATAAG
GTATTTGAAGATCATAATCTAGTATTAAGCATTCAGAGGAAATTCAGCTACCTTCAGAGC
ATACCGGGCATTTATGCAATTCAGAGACCTTTTTTGCCAATCCAACATCGATATACTTAC
AAGCCAAACAATGTCACTCTAGTTAACGAGACGGATTATCAAATGGATGACAAAAACCAG
CTAATTGGGTCGAAAAGAGTTCATGAGTTTCCGTTCAAGTCTATTAACTTTGGCTATAAT
AGCCCACAAACCATGGCTAGTCTACCTTTGTGGTCGATGCCTATAGCAGCACCGTCTTGT
TATGGTAATGCAGTACATGAGATGAGTTCTTTACACGACAGAGTTACGAAGAACACTACA
AGCAAGGATGTCAAGGTTGTAGATGAATTAGGCCATTTTAAGTTTGAGACAGCTGAGGAA
AATGACCAATTTTCCTTAAACCAGAACTTAGGCCTGGAAAATAAGGTAGTTGAGGTTGGT
TTTAGACAGTTGGGAAAAGGAGGGGCTGCTCCAAATCCAAATTAA