Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020470
CDS Infomation

pacid=37446802 polypeptide=PGSC0003DMP400013950 locus=PGSC0003DMG400007910 ID=PGSC0003DMT400020470.v4.03 annot-version=v4.03
Sequence

ATGGCTGATATTGGCAAGGCAATGTCTCGATTCGACGTAGAATCGTTACAAGAAATGCAT
TGTGTTCAAGAACAACTTATAGAGAAGTTGTACAATGAGTTGGATGAAGAAAGTGAAGCC
TCATCTAGTGCAGCAACTGAAGCTCTATCGATGATTTTACGTCTACAAGGTGAAAAGGCT
GCAGAGGAAATGGAAGCAGAACAGTACAAGAGATTTGTAGAAGAAAAAATGAGTCATGCT
GAAGAATCATTATGTGTTTTACAAGAACTTATTGATCAAAAACAGATGGAGATAGATGAA
TTGGATCATCATGCACAAGTTTATCGAAATAAGCTTGTGAGTATGGGCTATGATGATGAT
ATTGATGATAGTGATCTCGAATATCTCGAGGATTTAGAAGGAAAAATGATTGTTCAGTCT
ATTGGGAGGTGTAAATCCACTCCGAATATCCCATTGAAATATGCTAATATGAAAAAGGAT
GTTCTTAAAGACGAAAAGATCAGTCCAAAACGCGATTTGAATGATGTTCCAACGGCTGGG
AGTATAAGTTTGTACTGTGAGCAGATCGAAAAGTTGGAAGAAAGAGTGAAACAGATTGCT
GGTGCTAACTATGCGAAATTGTCTAGTTTACCAGTTTCTAAAAGAAGCTCTTGTAACAAT
TTCTTGGAGCAATTTAAAGAAACGTACCTCGTTCAGCATCGAGGGAATAAATCAGCTAAC
GAAGTTGCTGCTAGTCGTTCTGCTTCTCCTCCGAATGTTCTTGATGTCTTTGAAGTCCCT
CGAGCCATTAAAGACGAAGATTTTGTTGTCCGAAAGGAGGCTCAAAAACAACTTGTTAAA
GATGAAACTGATTGGCATAAGAAATATTTAGTACCTATGCAGCATTTGGATAATTGTCCT
ACAACTAGTGCTTCAGAAACAGCAGAGATTCGTCATGTCAATAGGACGACGTTTGAGATA
GCTGAAGTCAAGAGACAAGGTATGAGGCAAGAACCCGACAGACACAAAGAGCTAATGTTG
TTACATGACATTAAGGAGCAACTAAATTTAGTACCTATAAAACATTTGAAAAATTGTCCA
ATGACTAATGCTTCAGAAACAGCAGAGATTCGTCGTGTCAATAAGAAGTTTGAGATAGCT
GAAGTCGAGAGACATGGTACGAGGCAAGAGACAGAGAGACACAAAGAGCTAATGTTGTTA
CATGACATTAAGGAGCAACTTAATTTAGTACCTATGCAGAATGAGAACAAGTTACATAGA
GTAGGTGAAGCTGCTTCTCCTACCACTAGTTCTTCAGAAACAGCAGAGATCTGTCCTGTC
AATAGGACGACGTTTGAGATAGCTGAAGTCAAGAGACAAGGTATGAGGCAAGAACCCGAC
AGACACAAAGAGCTAATGTTGTTACATGACATTAAGGAGCAACTTAATTTAGTACCTATG
CAGAATGAGAACAAGTTACATAGAGTAGGTGAAGCTGCTTCTCCTACCACTAGTTCTTCA
GAAACAGCAGAGATCTGTCCTGTCAATAGGACGACGTTTGAGATAGCTGAAGTTGAGAGA
CAACGTACGAGGCAAGAATCTAACAGACACGAAGAGCTAACGTTGTTATATGAGATCAAG
GAGCAACTAAATTTGATGCAATCTGACATTAAAACTTGGAAAAATATCAAGTCCCATCCA
AGAAATGAGCCATCTGTAGTTTCTCTAACAGAGGTGATGGCTTGCTTTTGGCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013950
PEP Infomation

pacid=37446802 transcript=PGSC0003DMT400020470 locus=PGSC0003DMG400007910 ID=PGSC0003DMT400020470.v4.03 annot-version=v4.03
Sequence

MADIGKAMSRFDVESLQEMHCVQEQLIEKLYNELDEESEASSSAATEALSMILRLQGEKA
AEEMEAEQYKRFVEEKMSHAEESLCVLQELIDQKQMEIDELDHHAQVYRNKLVSMGYDDD
IDDSDLEYLEDLEGKMIVQSIGRCKSTPNIPLKYANMKKDVLKDEKISPKRDLNDVPTAG
SISLYCEQIEKLEERVKQIAGANYAKLSSLPVSKRSSCNNFLEQFKETYLVQHRGNKSAN
EVAASRSASPPNVLDVFEVPRAIKDEDFVVRKEAQKQLVKDETDWHKKYLVPMQHLDNCP
TTSASETAEIRHVNRTTFEIAEVKRQGMRQEPDRHKELMLLHDIKEQLNLVPIKHLKNCP
MTNASETAEIRRVNKKFEIAEVERHGTRQETERHKELMLLHDIKEQLNLVPMQNENKLHR
VGEAASPTTSSSETAEICPVNRTTFEIAEVKRQGMRQEPDRHKELMLLHDIKEQLNLVPM
QNENKLHRVGEAASPTTSSSETAEICPVNRTTFEIAEVERQRTRQESNRHEELTLLYEIK
EQLNLMQSDIKTWKNIKSHPRNEPSVVSLTEVMACFWL*

Transcript Sequence

Transcript ID

PGSC0003DMT400020470
Transcript Infomation

pacid=37446802 locus=PGSC0003DMG400007910 ID=PGSC0003DMT400020470.v4.03 annot-version=v4.03
Sequence

ATGGCTGATATTGGCAAGGCAATGTCTCGATTCGACGTAGAATCGTTACAAGAAATGCAT
TGTGTTCAAGAACAACTTATAGAGAAGTTGTACAATGAGTTGGATGAAGAAAGTGAAGCC
TCATCTAGTGCAGCAACTGAAGCTCTATCGATGATTTTACGTCTACAAGGTGAAAAGGCT
GCAGAGGAAATGGAAGCAGAACAGTACAAGAGATTTGTAGAAGAAAAAATGAGTCATGCT
GAAGAATCATTATGTGTTTTACAAGAACTTATTGATCAAAAACAGATGGAGATAGATGAA
TTGGATCATCATGCACAAGTTTATCGAAATAAGCTTGTGAGTATGGGCTATGATGATGAT
ATTGATGATAGTGATCTCGAATATCTCGAGGATTTAGAAGGAAAAATGATTGTTCAGTCT
ATTGGGAGGTGTAAATCCACTCCGAATATCCCATTGAAATATGCTAATATGAAAAAGGAT
GTTCTTAAAGACGAAAAGATCAGTCCAAAACGCGATTTGAATGATGTTCCAACGGCTGGG
AGTATAAGTTTGTACTGTGAGCAGATCGAAAAGTTGGAAGAAAGAGTGAAACAGATTGCT
GGTGCTAACTATGCGAAATTGTCTAGTTTACCAGTTTCTAAAAGAAGCTCTTGTAACAAT
TTCTTGGAGCAATTTAAAGAAACGTACCTCGTTCAGCATCGAGGGAATAAATCAGCTAAC
GAAGTTGCTGCTAGTCGTTCTGCTTCTCCTCCGAATGTTCTTGATGTCTTTGAAGTCCCT
CGAGCCATTAAAGACGAAGATTTTGTTGTCCGAAAGGAGGCTCAAAAACAACTTGTTAAA
GATGAAACTGATTGGCATAAGAAATATTTAGTACCTATGCAGCATTTGGATAATTGTCCT
ACAACTAGTGCTTCAGAAACAGCAGAGATTCGTCATGTCAATAGGACGACGTTTGAGATA
GCTGAAGTCAAGAGACAAGGTATGAGGCAAGAACCCGACAGACACAAAGAGCTAATGTTG
TTACATGACATTAAGGAGCAACTAAATTTAGTACCTATAAAACATTTGAAAAATTGTCCA
ATGACTAATGCTTCAGAAACAGCAGAGATTCGTCGTGTCAATAAGAAGTTTGAGATAGCT
GAAGTCGAGAGACATGGTACGAGGCAAGAGACAGAGAGACACAAAGAGCTAATGTTGTTA
CATGACATTAAGGAGCAACTTAATTTAGTACCTATGCAGAATGAGAACAAGTTACATAGA
GTAGGTGAAGCTGCTTCTCCTACCACTAGTTCTTCAGAAACAGCAGAGATCTGTCCTGTC
AATAGGACGACGTTTGAGATAGCTGAAGTCAAGAGACAAGGTATGAGGCAAGAACCCGAC
AGACACAAAGAGCTAATGTTGTTACATGACATTAAGGAGCAACTTAATTTAGTACCTATG
CAGAATGAGAACAAGTTACATAGAGTAGGTGAAGCTGCTTCTCCTACCACTAGTTCTTCA
GAAACAGCAGAGATCTGTCCTGTCAATAGGACGACGTTTGAGATAGCTGAAGTTGAGAGA
CAACGTACGAGGCAAGAATCTAACAGACACGAAGAGCTAACGTTGTTATATGAGATCAAG
GAGCAACTAAATTTGATGCAATCTGACATTAAAACTTGGAAAAATATCAAGTCCCATCCA
AGAAATGAGCCATCTGTAGTTTCTCTAACAGAGGTGATGGCTTGCTTTTGGCTTTGA