Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020464
CDS Infomation

pacid=37449020 polypeptide=PGSC0003DMP400013944 locus=PGSC0003DMG400007907 ID=PGSC0003DMT400020464.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTGATCAGACGGTGATAAGTTTGAGACCAGGTGGTGGTAACAGAGGTGGTGGA
AGCAGAGTATTTGGCTCTCGCTTTGATACCTCATCTACCAATTCTGATCTCTCAGTTTTT
CGTACTCATGGTGGTTCTTCATCTTTGCCATCTTTCAAGACTGGAGATTCTCGTTTTGAG
AGCCATGAACGTGTTCGCTATACTCGAGATCAACTCCTGCAACTGAGGGAGGCGGTTGTC
TTACAGTTACCTGAGGTTTTTCTGCAAATCAAACAAGAAATTGAAGCGGAACTGTTTGGT
GAAGATGCCTCTCGGGGTCGTGTGGATAACAATGTGCAGGTTCAGTCTCAGGGTCGTTAT
TCTGAACCAGACAATCGTGACTGGCGTAATAGGCCAGCACAATTTTCTGCCCCCATAGAG
GAGAGGTCATGGGAAGCACTTCGAGAAAACAGGGAATTTGGTGGCCAGTATACTCGGCAA
GAGCAATCACAGTTTGCAAGAGCTCAAGTTTCTGCCAACCAAGGGGGAGGTCCTGCTCCT
ACACTGATCAAAGCTGAGGTGCCATGGTCAGTCCAAAGGGGCACTCTTTCTGACAAAGCT
CGTGTCTTGAAAACAGTCAAGGGAATACTCAACAAGTTGACCCCAGAGAAATTTGATCTT
CTCAAAGGCCAATTAATAGATTCAGGGATAACGAGTGCAGACATTCTAAAGGGTGTGATC
TCCTTGATATTTGACAAGGCCGTATTGGAACCCACCTTTTGCCCGATGTATGCCCAGTTG
TGTTCTGATCTCAATGAGAAGCTTCCTCCATTTCCATCTGATGAACCTGGTGGGAAAGAA
ATCACGTTTAAGCGTGTTCTTCTGAATAATTGCCAAGAGGCATTTGAAGGTGCTGACAAA
TTGAGGGAAGAGGCGAGACAAATGACTGCTCCGGAGCAGGAGTCAGAACGCAAGGACAAA
GAAAGGTTGATCAAATTGCGCACTCTTGGAAACATACGTCTTATTGGGGAGCTTTTGAAG
CAAAATATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGGAACTATTAGGACAAGAT
CCCAAAAGCTGTCCAGAAGAAGAGAACGTTGAAGCTATATGCCAATTCTTTAACACCATT
GGTAAGCAGCTTGACAAGAAGCAAAAGTCAAGGCACATCAATGATATGTATTTCAACCGA
TTGAAAGAACTATCAACAAATCCTCAGCTGGTAGCACGCCTAAAGTTTTTGGTGCGTGAT
GTGCTGGATTTACGTGCCAATAACTGGGTCCCTAGGCGGGAAGAGGTGAAAGCCAAAACC
ATTAATGAGATCCACTCGGAAGCAGAGAAGACCTTGGGGTTGCGTCCTGGTGCTACATTA
AGCATTAGAAATGCTCGTGCTCCTCCAGGTGCTCAAGGGAATTTGGGTCCTGGTGGCTAT
CCCATTAATCGACCCGGCACTGGTGGTATGATGCCAGGGATGCCAGGAGCAAGGAAGATG
CCTGGGATGCCAGGAATGGATAATGACATCTGGGAGGTTCCTAGGTCACGAATGCCAAGA
GGTGCTCAGCAACCATTGATTGGCAAGTCGCCGTCCTTGAACACAAGACTGTTGCCTCAG
GGTAGCAATGTCAGCATGAGTGGCAGGAGTAGCGCCCTCTTACAAGGTAGTGGTGGACCT
CCTGTCCGACCATCAGGCTATGTCTCTGGTATGGAGCCTGTATCACAAGTTCCAGTACCA
GTTAAGCTATCTCCAACTAGTACCGTTTTGCCTGTTGCTGAGAAACCTCAGGTTCCAGCT
GCAAGGTCAAATCCCGAGGAGCTGAAAAGAAAAACAGTTTCACTTTTGGAGGAATATTTT
AGTGTTCGGATTTTGGATGAAGCCTTGCAGTGCATTGAGGAACTCAAATCCCCTGCCTTC
TATCCTGAAGTTGTCGAGAAAGCCATATCACTTGGACTGGACAAAAGCCCACCACGCGTT
GAACCAGTTGCACAACTTCTTGAGCACTTGTTTGCTAAAAAGGTTTTTACTGCTTCAGAC
TTGGCCACTGGATGCTTGAACTTTGCTTCTCAGTTGGAAGATCTTGCGATGGATTTACCA
AAAGCACCAGCAAATTTCGGGGAGATAATTTCAAAGCTAGTTTTGACAGGGGCAATGGAC
TTCAAGTTGGTGAATGAGATCCTGCAGAAGGTAACCGATGACTTGTACGAGAAGGACTTA
TTTGCTGCCATCATGAAAGCTATTAGCTCTAGCCCTACTGGTCAAGGAGTATTAGATTCA
CAAGCACCTGATGTTGAAGCCTGCAAAAATCTGTTCCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013944
PEP Infomation

pacid=37449020 transcript=PGSC0003DMT400020464 locus=PGSC0003DMG400007907 ID=PGSC0003DMT400020464.v4.03 annot-version=v4.03
Sequence

MQADQTVISLRPGGGNRGGGSRVFGSRFDTSSTNSDLSVFRTHGGSSSLPSFKTGDSRFE
SHERVRYTRDQLLQLREAVVLQLPEVFLQIKQEIEAELFGEDASRGRVDNNVQVQSQGRY
SEPDNRDWRNRPAQFSAPIEERSWEALRENREFGGQYTRQEQSQFARAQVSANQGGGPAP
TLIKAEVPWSVQRGTLSDKARVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVI
SLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADK
LREEARQMTAPEQESERKDKERLIKLRTLGNIRLIGELLKQNMVPEKIVHHIVQELLGQD
PKSCPEEENVEAICQFFNTIGKQLDKKQKSRHINDMYFNRLKELSTNPQLVARLKFLVRD
VLDLRANNWVPRREEVKAKTINEIHSEAEKTLGLRPGATLSIRNARAPPGAQGNLGPGGY
PINRPGTGGMMPGMPGARKMPGMPGMDNDIWEVPRSRMPRGAQQPLIGKSPSLNTRLLPQ
GSNVSMSGRSSALLQGSGGPPVRPSGYVSGMEPVSQVPVPVKLSPTSTVLPVAEKPQVPA
ARSNPEELKRKTVSLLEEYFSVRILDEALQCIEELKSPAFYPEVVEKAISLGLDKSPPRV
EPVAQLLEHLFAKKVFTASDLATGCLNFASQLEDLAMDLPKAPANFGEIISKLVLTGAMD
FKLVNEILQKVTDDLYEKDLFAAIMKAISSSPTGQGVLDSQAPDVEACKNLFQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400020464
Transcript Infomation

pacid=37449020 locus=PGSC0003DMG400007907 ID=PGSC0003DMT400020464.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTGATCAGACGGTGATAAGTTTGAGACCAGGTGGTGGTAACAGAGGTGGTGGA
AGCAGAGTATTTGGCTCTCGCTTTGATACCTCATCTACCAATTCTGATCTCTCAGTTTTT
CGTACTCATGGTGGTTCTTCATCTTTGCCATCTTTCAAGACTGGAGATTCTCGTTTTGAG
AGCCATGAACGTGTTCGCTATACTCGAGATCAACTCCTGCAACTGAGGGAGGCGGTTGTC
TTACAGTTACCTGAGGTTTTTCTGCAAATCAAACAAGAAATTGAAGCGGAACTGTTTGGT
GAAGATGCCTCTCGGGGTCGTGTGGATAACAATGTGCAGGTTCAGTCTCAGGGTCGTTAT
TCTGAACCAGACAATCGTGACTGGCGTAATAGGCCAGCACAATTTTCTGCCCCCATAGAG
GAGAGGTCATGGGAAGCACTTCGAGAAAACAGGGAATTTGGTGGCCAGTATACTCGGCAA
GAGCAATCACAGTTTGCAAGAGCTCAAGTTTCTGCCAACCAAGGGGGAGGTCCTGCTCCT
ACACTGATCAAAGCTGAGGTGCCATGGTCAGTCCAAAGGGGCACTCTTTCTGACAAAGCT
CGTGTCTTGAAAACAGTCAAGGGAATACTCAACAAGTTGACCCCAGAGAAATTTGATCTT
CTCAAAGGCCAATTAATAGATTCAGGGATAACGAGTGCAGACATTCTAAAGGGTGTGATC
TCCTTGATATTTGACAAGGCCGTATTGGAACCCACCTTTTGCCCGATGTATGCCCAGTTG
TGTTCTGATCTCAATGAGAAGCTTCCTCCATTTCCATCTGATGAACCTGGTGGGAAAGAA
ATCACGTTTAAGCGTGTTCTTCTGAATAATTGCCAAGAGGCATTTGAAGGTGCTGACAAA
TTGAGGGAAGAGGCGAGACAAATGACTGCTCCGGAGCAGGAGTCAGAACGCAAGGACAAA
GAAAGGTTGATCAAATTGCGCACTCTTGGAAACATACGTCTTATTGGGGAGCTTTTGAAG
CAAAATATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGGAACTATTAGGACAAGAT
CCCAAAAGCTGTCCAGAAGAAGAGAACGTTGAAGCTATATGCCAATTCTTTAACACCATT
GGTAAGCAGCTTGACAAGAAGCAAAAGTCAAGGCACATCAATGATATGTATTTCAACCGA
TTGAAAGAACTATCAACAAATCCTCAGCTGGTAGCACGCCTAAAGTTTTTGGTGCGTGAT
GTGCTGGATTTACGTGCCAATAACTGGGTCCCTAGGCGGGAAGAGGTGAAAGCCAAAACC
ATTAATGAGATCCACTCGGAAGCAGAGAAGACCTTGGGGTTGCGTCCTGGTGCTACATTA
AGCATTAGAAATGCTCGTGCTCCTCCAGGTGCTCAAGGGAATTTGGGTCCTGGTGGCTAT
CCCATTAATCGACCCGGCACTGGTGGTATGATGCCAGGGATGCCAGGAGCAAGGAAGATG
CCTGGGATGCCAGGAATGGATAATGACATCTGGGAGGTTCCTAGGTCACGAATGCCAAGA
GGTGCTCAGCAACCATTGATTGGCAAGTCGCCGTCCTTGAACACAAGACTGTTGCCTCAG
GGTAGCAATGTCAGCATGAGTGGCAGGAGTAGCGCCCTCTTACAAGGTAGTGGTGGACCT
CCTGTCCGACCATCAGGCTATGTCTCTGGTATGGAGCCTGTATCACAAGTTCCAGTACCA
GTTAAGCTATCTCCAACTAGTACCGTTTTGCCTGTTGCTGAGAAACCTCAGGTTCCAGCT
GCAAGGTCAAATCCCGAGGAGCTGAAAAGAAAAACAGTTTCACTTTTGGAGGAATATTTT
AGTGTTCGGATTTTGGATGAAGCCTTGCAGTGCATTGAGGAACTCAAATCCCCTGCCTTC
TATCCTGAAGTTGTCGAGAAAGCCATATCACTTGGACTGGACAAAAGCCCACCACGCGTT
GAACCAGTTGCACAACTTCTTGAGCACTTGTTTGCTAAAAAGGTTTTTACTGCTTCAGAC
TTGGCCACTGGATGCTTGAACTTTGCTTCTCAGTTGGAAGATCTTGCGATGGATTTACCA
AAAGCACCAGCAAATTTCGGGGAGATAATTTCAAAGCTAGTTTTGACAGGGGCAATGGAC
TTCAAGTTGGTGAATGAGATCCTGCAGAAGGTAACCGATGACTTGTACGAGAAGGACTTA
TTTGCTGCCATCATGAAAGCTATTAGCTCTAGCCCTACTGGTCAAGGAGTATTAGATTCA
CAAGCACCTGATGTTGAAGCCTGCAAAAATCTGTTCCAGTAA