Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020456
CDS Infomation

pacid=37448455 polypeptide=PGSC0003DMP400013936 locus=PGSC0003DMG400007903 ID=PGSC0003DMT400020456.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTTTAAGACATTCTGGCCATGCAACTAGCAGCCCGTCAAGGTCTTTTAAGAGA
GGAATGAGAAAAGGATCTGAAGGACTGAAGTCGATTGGTCGATCACTAGGATTTGGTGTC
GCTAAGGCAGTATTTCCTGAAGATCTGAAAGTTTCAGAGAAGAAGATTTTTGATCCTCAA
GATAAATTCCTTCTCTTGTGGAATAAGCTGTTTGTTATATCATGCATTCTGGCCGTGTCT
GTGGATCCTTTGTTTTTCTACCTTCCAGTTTTTGATGACAAGTCAAATTGCCTTCAGATT
GATCGAAAGCTAGCTGTGATAGCCACAACGCTTCGTACCGTTGTTGATGCTTTCTATCTT
ATTCACATGGCACTTCAGTTTCGTACAGCTTATATTGCACCATCATCTCGAGTTTTTGGA
AGGGGTGAACTTGTGATAGATCCTGGACAGATTGCTAAAAGATACTTGCGATCCTATTTT
ATCATCGATCTTCTTGCTGTGGTTCCCTTGCCTCAGATTGTAGCTGGGAGATTCCTGCAG
AGATCGACAGGTTCTGATGTACTGGCTACCAAACAAGCTTTACTCTATATCATTTTGCTC
CAGTATATCCCCAGATTTGTCCGAGTTATACCCTTAACGTCAGAATTGAAAAGAACTACT
GGTGTCTTTGCTGAAACTGCATGGGCTGGTGCTGTATCGTATTTGCTGTTGTACATGCTT
GCTAGTCACATAGTTGGCTCCTTTTGGTATTTGCTTTCTGTGGAACGCTATGATACATGC
TGGGAAAGAGCTTGTAGTCATAACGCAACATGCCAAACTGATTTCTTGTACTGCGGCAAT
CAAGACATGACAGGGTATAATGCTTGGAGCAATATCAGTGAATCGGTTTTAAATGGAGCA
TGCCCTCGGAGCGGTGACAATCCACCATTTGATTTTGGAATTTTCGGGCAGGCTTTGTCA
TCAGGCATAGTTTTCTCGATGAATACCCTTGGACAGGGACTTCAAACTAGCACATATCCC
GGGGAGTCTTTATTCTCTATTGCACTAGCGATACTCGGACTCATTCTCTTTGCACTGTTG
ATTGGTAACATGCAGACATACCTTCAGTCTCTTACTATTCGACTTGAAGAGATGAGAGTT
AGAAGGCGTGACTCAGAACAATGGATGCATCACCGATTGCTTCCACAAGAACTACGAGAA
CGGGTAAGGGGCTATGATCAGTACAAGTGGCAAGAAACACGTGGAGTGGATGAAGAAAAT
ATAGTTCAGAATTTGCCCAAGGATCTCAGGAGGGATATTAAACGTCATCTTTGTCTGGCT
CTAGTGAAGAGGGTGCCTCTATTTGCAAATATGGAGGAGAGATTGCTTGATGCAATTTGT
GAGCATCTAAAACCCTGTTTGTACATCGAGAACACTTACCTTGTTCGAGAAGGAGATCCA
GTGGATGAAATGCTCTTTGTGATACGAGGTCGCCTTGAGAGTGTGACAACTGATGGTGGG
AGAAGCGGTTTCTTCAACCGCAGTTTGTTAAAAGAATCTGACTTCTGTGGAGAAGAACTT
CTTACTTGGGCACTAGACCCGAAATCAGGTTCTAACCTCCCATCTTCTACTCGTACTGTG
AAAGCACTAACAGAGGTAGAGGCTTTTGCATTAATAGCAGATGAGTTGAAATTCGTCGCC
AGTCAGTTCAGAAAGCTCCACAGTAGACAGGTACAGCACACGTTCCGTTTCTACTCACAG
CACTGGAGAACTTGGGCTGCTTGCTTCATCCAAGCAGCATGGAGGCGTTTCACGAAAAGG
AAACTTATGGAACTTCAAAGAAAAGAAGACGAAGAAGCAGAAGCATTGGCCGGGGCCAGT
AGTAACTCGGGTGGAGCTTCTTTTAGTATTGGGGCAACGTTCTTGGCATCGAGATTTGCA
GCTAATGCTCTCCGAGGCGTTCACAAGAATCGAAATCTCAAGTCTGCTAGGGAGCTTATG
AAGCTGCAAAAGCCTCCAGAACCTGATTTCAGTGAAGATACTGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013936
PEP Infomation

pacid=37448455 transcript=PGSC0003DMT400020456 locus=PGSC0003DMG400007903 ID=PGSC0003DMT400020456.v4.03 annot-version=v4.03
Sequence

MEALRHSGHATSSPSRSFKRGMRKGSEGLKSIGRSLGFGVAKAVFPEDLKVSEKKIFDPQ
DKFLLLWNKLFVISCILAVSVDPLFFYLPVFDDKSNCLQIDRKLAVIATTLRTVVDAFYL
IHMALQFRTAYIAPSSRVFGRGELVIDPGQIAKRYLRSYFIIDLLAVVPLPQIVAGRFLQ
RSTGSDVLATKQALLYIILLQYIPRFVRVIPLTSELKRTTGVFAETAWAGAVSYLLLYML
ASHIVGSFWYLLSVERYDTCWERACSHNATCQTDFLYCGNQDMTGYNAWSNISESVLNGA
CPRSGDNPPFDFGIFGQALSSGIVFSMNTLGQGLQTSTYPGESLFSIALAILGLILFALL
IGNMQTYLQSLTIRLEEMRVRRRDSEQWMHHRLLPQELRERVRGYDQYKWQETRGVDEEN
IVQNLPKDLRRDIKRHLCLALVKRVPLFANMEERLLDAICEHLKPCLYIENTYLVREGDP
VDEMLFVIRGRLESVTTDGGRSGFFNRSLLKESDFCGEELLTWALDPKSGSNLPSSTRTV
KALTEVEAFALIADELKFVASQFRKLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRFTKR
KLMELQRKEDEEAEALAGASSNSGGASFSIGATFLASRFAANALRGVHKNRNLKSARELM
KLQKPPEPDFSEDTE*

Transcript Sequence

Transcript ID

PGSC0003DMT400020456
Transcript Infomation

pacid=37448455 locus=PGSC0003DMG400007903 ID=PGSC0003DMT400020456.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTTTAAGACATTCTGGCCATGCAACTAGCAGCCCGTCAAGGTCTTTTAAGAGA
GGAATGAGAAAAGGATCTGAAGGACTGAAGTCGATTGGTCGATCACTAGGATTTGGTGTC
GCTAAGGCAGTATTTCCTGAAGATCTGAAAGTTTCAGAGAAGAAGATTTTTGATCCTCAA
GATAAATTCCTTCTCTTGTGGAATAAGCTGTTTGTTATATCATGCATTCTGGCCGTGTCT
GTGGATCCTTTGTTTTTCTACCTTCCAGTTTTTGATGACAAGTCAAATTGCCTTCAGATT
GATCGAAAGCTAGCTGTGATAGCCACAACGCTTCGTACCGTTGTTGATGCTTTCTATCTT
ATTCACATGGCACTTCAGTTTCGTACAGCTTATATTGCACCATCATCTCGAGTTTTTGGA
AGGGGTGAACTTGTGATAGATCCTGGACAGATTGCTAAAAGATACTTGCGATCCTATTTT
ATCATCGATCTTCTTGCTGTGGTTCCCTTGCCTCAGATTGTAGCTGGGAGATTCCTGCAG
AGATCGACAGGTTCTGATGTACTGGCTACCAAACAAGCTTTACTCTATATCATTTTGCTC
CAGTATATCCCCAGATTTGTCCGAGTTATACCCTTAACGTCAGAATTGAAAAGAACTACT
GGTGTCTTTGCTGAAACTGCATGGGCTGGTGCTGTATCGTATTTGCTGTTGTACATGCTT
GCTAGTCACATAGTTGGCTCCTTTTGGTATTTGCTTTCTGTGGAACGCTATGATACATGC
TGGGAAAGAGCTTGTAGTCATAACGCAACATGCCAAACTGATTTCTTGTACTGCGGCAAT
CAAGACATGACAGGGTATAATGCTTGGAGCAATATCAGTGAATCGGTTTTAAATGGAGCA
TGCCCTCGGAGCGGTGACAATCCACCATTTGATTTTGGAATTTTCGGGCAGGCTTTGTCA
TCAGGCATAGTTTTCTCGATGAATACCCTTGGACAGGGACTTCAAACTAGCACATATCCC
GGGGAGTCTTTATTCTCTATTGCACTAGCGATACTCGGACTCATTCTCTTTGCACTGTTG
ATTGGTAACATGCAGACATACCTTCAGTCTCTTACTATTCGACTTGAAGAGATGAGAGTT
AGAAGGCGTGACTCAGAACAATGGATGCATCACCGATTGCTTCCACAAGAACTACGAGAA
CGGGTAAGGGGCTATGATCAGTACAAGTGGCAAGAAACACGTGGAGTGGATGAAGAAAAT
ATAGTTCAGAATTTGCCCAAGGATCTCAGGAGGGATATTAAACGTCATCTTTGTCTGGCT
CTAGTGAAGAGGGTGCCTCTATTTGCAAATATGGAGGAGAGATTGCTTGATGCAATTTGT
GAGCATCTAAAACCCTGTTTGTACATCGAGAACACTTACCTTGTTCGAGAAGGAGATCCA
GTGGATGAAATGCTCTTTGTGATACGAGGTCGCCTTGAGAGTGTGACAACTGATGGTGGG
AGAAGCGGTTTCTTCAACCGCAGTTTGTTAAAAGAATCTGACTTCTGTGGAGAAGAACTT
CTTACTTGGGCACTAGACCCGAAATCAGGTTCTAACCTCCCATCTTCTACTCGTACTGTG
AAAGCACTAACAGAGGTAGAGGCTTTTGCATTAATAGCAGATGAGTTGAAATTCGTCGCC
AGTCAGTTCAGAAAGCTCCACAGTAGACAGGTACAGCACACGTTCCGTTTCTACTCACAG
CACTGGAGAACTTGGGCTGCTTGCTTCATCCAAGCAGCATGGAGGCGTTTCACGAAAAGG
AAACTTATGGAACTTCAAAGAAAAGAAGACGAAGAAGCAGAAGCATTGGCCGGGGCCAGT
AGTAACTCGGGTGGAGCTTCTTTTAGTATTGGGGCAACGTTCTTGGCATCGAGATTTGCA
GCTAATGCTCTCCGAGGCGTTCACAAGAATCGAAATCTCAAGTCTGCTAGGGAGCTTATG
AAGCTGCAAAAGCCTCCAGAACCTGATTTCAGTGAAGATACTGAGTGA