Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020455
CDS Infomation

pacid=37449044 polypeptide=PGSC0003DMP400013935 locus=PGSC0003DMG400007902 ID=PGSC0003DMT400020455.v4.03 annot-version=v4.03
Sequence

ATGTCAGGAGCTTCAAGGGTAAGGTCAATGAATGTAGCTGATTCAGAAGCAAGGCCAGTT
CTTGGACTAGCTGGGAATAAGGCACAGAGGTCACCTGGTTCAAGAAAATCTGTTTCGAAA
CCTACGAGAAAGATAGTGAAGTCAAAAGAGGAGCTTGAGATGGGAGATAAAAATGGTCAC
CAACCATCCCCTTCATTGCTTTCTTTTGATGTTCCCTCAATACTTAGGCGACAGGAGTCG
TTGTATTCCAACTTTTCACTTAGTGCTTCATGTTCTTCTGATGCCTCGACGGATTCATTT
CACAGCAGTGCTTCAACTGGTAGGATATATAGAATGAATAGTACCTCAAGCAGAAGGAAG
CAGTTGGCGTCGAAGTCCAAAAGGATAGTTTCAGATGATATATCAGACTCTTCAATTGAC
GGTTCGCAATCCAAGAAAAGATGTGCCTGGGTGACACCTAATACAGATCCATCTTATGCT
AATTTTCACGATGAAGAATGGGGAGTTCCAGTCCATGACGACAAGAAGCTATTCGAGCTC
CTTGTCCTTTGCGGGGCATTGGCTGAACTCACATGGCCTTCCATTCTTTGCAAGAGGCAC
ATATTCAGAGAAGTATTCGCAGATTTTGATCCCATAGTAGTGGCCAAGTTGAATGAAAAG
AAGACTTTAGCTCCTGGAGGTACAGCATGCTCACTATTATCAGAACTTAAACTGCGAGGC
ATCATTGAAAATGCTCGTCAAATGTTGAAGGTTATAGATGAATTTGGATCATTTGACAAG
TATATCTGGAGCTTTGTGAACCACAAGCCTATAGTAAGTGGATTTAGATATCCTCGTCAA
GTTCCGGTGAAGACAGCAAAAGCAGATCTGATTAGCAAAGACCTAATTAGGAGAGGTTTC
CGGGGCGTGGGACCTACTGTGGTCTACTCTTTCATGCAGGTTGCTGGTATTACAAATGAC
CATCTTATTAGTTGCTTTAGATTTCCTGACTGTGTTGAATCTGCTGAAGGTAAAGAGAAG
GACTCGAACAACGATGAAACTGAAGCAACACAAGCCAACAAAGCAAACGAAACAGAGATA
TGTAGATCAATCGATGACTTGAGTTTCTCCTCAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013935
PEP Infomation

pacid=37449044 transcript=PGSC0003DMT400020455 locus=PGSC0003DMG400007902 ID=PGSC0003DMT400020455.v4.03 annot-version=v4.03
Sequence

MSGASRVRSMNVADSEARPVLGLAGNKAQRSPGSRKSVSKPTRKIVKSKEELEMGDKNGH
QPSPSLLSFDVPSILRRQESLYSNFSLSASCSSDASTDSFHSSASTGRIYRMNSTSSRRK
QLASKSKRIVSDDISDSSIDGSQSKKRCAWVTPNTDPSYANFHDEEWGVPVHDDKKLFEL
LVLCGALAELTWPSILCKRHIFREVFADFDPIVVAKLNEKKTLAPGGTACSLLSELKLRG
IIENARQMLKVIDEFGSFDKYIWSFVNHKPIVSGFRYPRQVPVKTAKADLISKDLIRRGF
RGVGPTVVYSFMQVAGITNDHLISCFRFPDCVESAEGKEKDSNNDETEATQANKANETEI
CRSIDDLSFSSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400020455
Transcript Infomation

pacid=37449044 locus=PGSC0003DMG400007902 ID=PGSC0003DMT400020455.v4.03 annot-version=v4.03
Sequence

ATGTCAGGAGCTTCAAGGGTAAGGTCAATGAATGTAGCTGATTCAGAAGCAAGGCCAGTT
CTTGGACTAGCTGGGAATAAGGCACAGAGGTCACCTGGTTCAAGAAAATCTGTTTCGAAA
CCTACGAGAAAGATAGTGAAGTCAAAAGAGGAGCTTGAGATGGGAGATAAAAATGGTCAC
CAACCATCCCCTTCATTGCTTTCTTTTGATGTTCCCTCAATACTTAGGCGACAGGAGTCG
TTGTATTCCAACTTTTCACTTAGTGCTTCATGTTCTTCTGATGCCTCGACGGATTCATTT
CACAGCAGTGCTTCAACTGGTAGGATATATAGAATGAATAGTACCTCAAGCAGAAGGAAG
CAGTTGGCGTCGAAGTCCAAAAGGATAGTTTCAGATGATATATCAGACTCTTCAATTGAC
GGTTCGCAATCCAAGAAAAGATGTGCCTGGGTGACACCTAATACAGATCCATCTTATGCT
AATTTTCACGATGAAGAATGGGGAGTTCCAGTCCATGACGACAAGAAGCTATTCGAGCTC
CTTGTCCTTTGCGGGGCATTGGCTGAACTCACATGGCCTTCCATTCTTTGCAAGAGGCAC
ATATTCAGAGAAGTATTCGCAGATTTTGATCCCATAGTAGTGGCCAAGTTGAATGAAAAG
AAGACTTTAGCTCCTGGAGGTACAGCATGCTCACTATTATCAGAACTTAAACTGCGAGGC
ATCATTGAAAATGCTCGTCAAATGTTGAAGGTTATAGATGAATTTGGATCATTTGACAAG
TATATCTGGAGCTTTGTGAACCACAAGCCTATAGTAAGTGGATTTAGATATCCTCGTCAA
GTTCCGGTGAAGACAGCAAAAGCAGATCTGATTAGCAAAGACCTAATTAGGAGAGGTTTC
CGGGGCGTGGGACCTACTGTGGTCTACTCTTTCATGCAGGTTGCTGGTATTACAAATGAC
CATCTTATTAGTTGCTTTAGATTTCCTGACTGTGTTGAATCTGCTGAAGGTAAAGAGAAG
GACTCGAACAACGATGAAACTGAAGCAACACAAGCCAACAAAGCAAACGAAACAGAGATA
TGTAGATCAATCGATGACTTGAGTTTCTCCTCAGAGTGA