Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020448
CDS Infomation

pacid=37447203 polypeptide=PGSC0003DMP400013929 locus=PGSC0003DMG400007900 ID=PGSC0003DMT400020448.v4.03 annot-version=v4.03
Sequence

ATGGAAGGGGGCAATAGGAGGAGGAGCAAATCATCAAGAAATAATGGTGTTGTGGCAACA
GGTTCAGTTTGGGAGAATAGAATGAAACTTGATGAAGTAAAAGGTGGATTCAAAGTGTTT
AGTAATAGTAGTATTGAAGAAACCCCAGATGAAAATGATGACAAAGATTGTGTTTTTAAT
ACTCAAGTGGATGAAAAGTTGGATATGGGGCCAAAAAGAGAAAATCTTGATGTTGGGTTA
GTGAGTGGAAAGAGAAAAACTTGGAAAACTACTGAGAGTTTTGAGGGGAACCCAATTCAG
ATTGCTAGTAAAAAAACTGATTTGAGCAAAATTTTGGATGAAAAAAGTAGAGATTTGAGT
GTTTCTGCTGATGGGGTTGCTGGGATTACAAAGAAAACTTTGAAAAATGAGAGTTTTGAG
GGGAACCCTTTTCAGATTGCTAGTAAAAAAACTGATCTGAGCAAAAATTTGGATGAAAAA
TGTAGAAATTTGAGTGTTTCTGTTGATGGGGTTGTTGGGATTACAAAGAGAACTTGGAAA
AGTGAGAGTTTTGAGGGGAACCCTTTTCAGATAGCTAGTAAAAGATCTGATTTGAGGAAA
AAATTGGATGAAAAACGTAAAGATTTGAGTGTTTCTGCTGATGGGGTTTGTAAAAAAGTC
CCAATTCAGAGCAAGAAAAGTTCTGAGCTGAGAAAGCTGAAATCTGATAAGTCTGTTAAT
GGGAATGTGAAAAAATCCAATCTTGAGGAGTCAAGTAAGAATCTTGAAGGATCAATTGGG
ATTAAGAAGACAAAATCAGAGGAGTTTGGTATTTGTGAAGAGAAATTTATCACAAGCAAT
GCGGTATCTGAGGTTGAATCTGTAAATAAATTAGAAAAGAGTCTTGAAAATGAAGATGAT
GAAGAATGGGACGACGTATTGGAGGAAGAAATCGACGAGGGAAATGATAAGAGAAGTGTT
GAAGTTAAAGAAATTAGTGTACAAGAACAGAATAAGCTTAAAAAGATTGTGATTGAAGAG
AAGAGATTTCAGTACAATAATAAAAGGCAAATGCCAATTTCTTCAATTAATATGAAACAG
TCCCTTCCTACTTTTGTCAATGCAAATATTCATCAAAGTGCAACAAGAACCAAATCAGAT
GAATTCCAGTCTAGACAATATAGCAAATTACAAAGCTTGGTTGATTTAGTGATGTGGAGA
AATGTATCAAAATCAGCGTTAGTCTTTGGAATTGGAACATTTGTTATCATTTCATCTTCG
TATACTCAAGATCTCAATATCAGCTTCATTTCTGCACTCGCCTACTTGGGTCTGATCTAT
CTTGCTGCAATCTTTCTCTTTAGATCCCTCATTCACAGGGGAGCTATTGATATTGGTGAA
TCAAGTGAATGTGTAGTAGGCGAAGAAGAAGCACTGTGGATACTGAAATTGATTCTTCCT
TTAATAAATGAGTTTCTTTTGAAAATCAGAGCCCTTTTTTCTGGGGATCCTTCGACTACA
ATGAAGGTAAAGAAAAGTTCATACATTTCCATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013929
PEP Infomation

pacid=37447203 transcript=PGSC0003DMT400020448 locus=PGSC0003DMG400007900 ID=PGSC0003DMT400020448.v4.03 annot-version=v4.03
Sequence

MEGGNRRRSKSSRNNGVVATGSVWENRMKLDEVKGGFKVFSNSSIEETPDENDDKDCVFN
TQVDEKLDMGPKRENLDVGLVSGKRKTWKTTESFEGNPIQIASKKTDLSKILDEKSRDLS
VSADGVAGITKKTLKNESFEGNPFQIASKKTDLSKNLDEKCRNLSVSVDGVVGITKRTWK
SESFEGNPFQIASKRSDLRKKLDEKRKDLSVSADGVCKKVPIQSKKSSELRKLKSDKSVN
GNVKKSNLEESSKNLEGSIGIKKTKSEEFGICEEKFITSNAVSEVESVNKLEKSLENEDD
EEWDDVLEEEIDEGNDKRSVEVKEISVQEQNKLKKIVIEEKRFQYNNKRQMPISSINMKQ
SLPTFVNANIHQSATRTKSDEFQSRQYSKLQSLVDLVMWRNVSKSALVFGIGTFVIISSS
YTQDLNISFISALAYLGLIYLAAIFLFRSLIHRGAIDIGESSECVVGEEEALWILKLILP
LINEFLLKIRALFSGDPSTTMKVKKSSYISI*

Transcript Sequence

Transcript ID

PGSC0003DMT400020448
Transcript Infomation

pacid=37447203 locus=PGSC0003DMG400007900 ID=PGSC0003DMT400020448.v4.03 annot-version=v4.03
Sequence

ATGGAAGGGGGCAATAGGAGGAGGAGCAAATCATCAAGAAATAATGGTGTTGTGGCAACA
GGTTCAGTTTGGGAGAATAGAATGAAACTTGATGAAGTAAAAGGTGGATTCAAAGTGTTT
AGTAATAGTAGTATTGAAGAAACCCCAGATGAAAATGATGACAAAGATTGTGTTTTTAAT
ACTCAAGTGGATGAAAAGTTGGATATGGGGCCAAAAAGAGAAAATCTTGATGTTGGGTTA
GTGAGTGGAAAGAGAAAAACTTGGAAAACTACTGAGAGTTTTGAGGGGAACCCAATTCAG
ATTGCTAGTAAAAAAACTGATTTGAGCAAAATTTTGGATGAAAAAAGTAGAGATTTGAGT
GTTTCTGCTGATGGGGTTGCTGGGATTACAAAGAAAACTTTGAAAAATGAGAGTTTTGAG
GGGAACCCTTTTCAGATTGCTAGTAAAAAAACTGATCTGAGCAAAAATTTGGATGAAAAA
TGTAGAAATTTGAGTGTTTCTGTTGATGGGGTTGTTGGGATTACAAAGAGAACTTGGAAA
AGTGAGAGTTTTGAGGGGAACCCTTTTCAGATAGCTAGTAAAAGATCTGATTTGAGGAAA
AAATTGGATGAAAAACGTAAAGATTTGAGTGTTTCTGCTGATGGGGTTTGTAAAAAAGTC
CCAATTCAGAGCAAGAAAAGTTCTGAGCTGAGAAAGCTGAAATCTGATAAGTCTGTTAAT
GGGAATGTGAAAAAATCCAATCTTGAGGAGTCAAGTAAGAATCTTGAAGGATCAATTGGG
ATTAAGAAGACAAAATCAGAGGAGTTTGGTATTTGTGAAGAGAAATTTATCACAAGCAAT
GCGGTATCTGAGGTTGAATCTGTAAATAAATTAGAAAAGAGTCTTGAAAATGAAGATGAT
GAAGAATGGGACGACGTATTGGAGGAAGAAATCGACGAGGGAAATGATAAGAGAAGTGTT
GAAGTTAAAGAAATTAGTGTACAAGAACAGAATAAGCTTAAAAAGATTGTGATTGAAGAG
AAGAGATTTCAGTACAATAATAAAAGGCAAATGCCAATTTCTTCAATTAATATGAAACAG
TCCCTTCCTACTTTTGTCAATGCAAATATTCATCAAAGTGCAACAAGAACCAAATCAGAT
GAATTCCAGTCTAGACAATATAGCAAATTACAAAGCTTGGTTGATTTAGTGATGTGGAGA
AATGTATCAAAATCAGCGTTAGTCTTTGGAATTGGAACATTTGTTATCATTTCATCTTCG
TATACTCAAGATCTCAATATCAGCTTCATTTCTGCACTCGCCTACTTGGGTCTGATCTAT
CTTGCTGCAATCTTTCTCTTTAGATCCCTCATTCACAGGGGAGCTATTGATATTGGTGAA
TCAAGTGAATGTGTAGTAGGCGAAGAAGAAGCACTGTGGATACTGAAATTGATTCTTCCT
TTAATAAATGAGTTTCTTTTGAAAATCAGAGCCCTTTTTTCTGGGGATCCTTCGACTACA
ATGAAGGTAAAGAAAAGTTCATACATTTCCATTTGA