Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020396
CDS Infomation

pacid=37447677 polypeptide=PGSC0003DMP400013890 locus=PGSC0003DMG400007882 ID=PGSC0003DMT400020396.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGGTCAGGAGAGCGATAAGAACATTGAGATATGGAAGATTAAAAAACTTATC
AAGGCACTGGAAGCTGCTAGAGGCAATGGCACCAGCATGATTTCACTTATCATGCCTCCA
CGTGATCAAGTATCTCGTGTTACCAAGATGCTTGGAGATGAGTTTGGAACTGCATCAAAT
ATTAAGAGCAGAGTGAATCGCCAATCTGTGCTTGGTGCAATCACATCTGCTCAGCAGAGG
CTTAAACTCTACAACAAGGTTCCACCGAATGGGCTTGTCCTTTACACTGGAACAATTGTG
ACTGATGATGGGAAAGAGAAGAAGGTTACAATTGATTTTGAGCCATTCAAGCCCATTAAT
GCATCACTCTATCTCTGTGATAACAAGTTCCACACTGAAGCCCTGAATGAACTTTTGGAA
TCTGATGACAAATTTGGATTTATAGTGATGGATGGGAATGGGACTCTTTTTGGGACATTG
AGTGGCAACACGCGCGAGGTCCTTCATAAGTTTAGTGTTGATCTGCCCAAGAAACACGGA
AGAGGAGGACAATCAGCCTTGCGTTTTGCTCGTCTCCGGATGGAGAAACGACACAACTAT
GTGAGGAAGACAGCAGAGCTTGCAACCCAATTTTATATAAATCCTGCCACCAGTCAGCCC
AATGTCTCCGGCCTGATACTAGCTGGTTCTGCTGACTTTAAAACAGAGCTCAGTCAATCT
GATATGTTTGATCCTCGTCTTCAGGCTAAGATTCTAAATGTGGTTGATGTTTCTTATGGA
GGGGAAAATGGTTTTAACCAAGCAATTGAGCTCTCTGCTGAGATCTTAGCCAATGTGAAG
TTTATACAAGAGAAGAAATTGATAGGCAAGTACTTTGAGGAGATTAGTCAGGACACTGGG
AAGTACGTCTTTGGGGTGGATGATACATTAAAAGTTCTGGAAATGGGTGCTATTGAGACA
CTTATTGTGTGGGAAAATCTGGATATTATGAGGTATGTGCTGAAAAATAGCGGTTCTGGA
GAAATAGTTGTCAGACACTTCAACAAGGAGCAGGAGGCTGATCAGAGTAACTTCCGTGAT
CCTGTTACAAATGCAGAATTAGAGGTTCAGGAAAAATTGTCACTGCTTGAGTGGTTTGCT
AATGAGTACAGGAAATTTGGTTGTAGTCTGGAATTTGTCACCAACAAGTCACAAGAAGGA
TCTCAGTTTTGTCGAGGTTTTGGTGGTATTGGAGGACTCCTCCGTTATCAGCTTGATGTT
CGAGCTTTTGATGAGCTTTCTGATGATGGTGAAGTTTACGAAGACTCTGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013890
PEP Infomation

pacid=37447677 transcript=PGSC0003DMT400020396 locus=PGSC0003DMG400007882 ID=PGSC0003DMT400020396.v4.03 annot-version=v4.03
Sequence

MSDGQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKVLEMGAIETLIVWENLDIMRYVLKNSGSGEIVVRHFNKEQEADQSNFRD
PVTNAELEVQEKLSLLEWFANEYRKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDV
RAFDELSDDGEVYEDSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400020396
Transcript Infomation

pacid=37447677 locus=PGSC0003DMG400007882 ID=PGSC0003DMT400020396.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGGTCAGGAGAGCGATAAGAACATTGAGATATGGAAGATTAAAAAACTTATC
AAGGCACTGGAAGCTGCTAGAGGCAATGGCACCAGCATGATTTCACTTATCATGCCTCCA
CGTGATCAAGTATCTCGTGTTACCAAGATGCTTGGAGATGAGTTTGGAACTGCATCAAAT
ATTAAGAGCAGAGTGAATCGCCAATCTGTGCTTGGTGCAATCACATCTGCTCAGCAGAGG
CTTAAACTCTACAACAAGGTTCCACCGAATGGGCTTGTCCTTTACACTGGAACAATTGTG
ACTGATGATGGGAAAGAGAAGAAGGTTACAATTGATTTTGAGCCATTCAAGCCCATTAAT
GCATCACTCTATCTCTGTGATAACAAGTTCCACACTGAAGCCCTGAATGAACTTTTGGAA
TCTGATGACAAATTTGGATTTATAGTGATGGATGGGAATGGGACTCTTTTTGGGACATTG
AGTGGCAACACGCGCGAGGTCCTTCATAAGTTTAGTGTTGATCTGCCCAAGAAACACGGA
AGAGGAGGACAATCAGCCTTGCGTTTTGCTCGTCTCCGGATGGAGAAACGACACAACTAT
GTGAGGAAGACAGCAGAGCTTGCAACCCAATTTTATATAAATCCTGCCACCAGTCAGCCC
AATGTCTCCGGCCTGATACTAGCTGGTTCTGCTGACTTTAAAACAGAGCTCAGTCAATCT
GATATGTTTGATCCTCGTCTTCAGGCTAAGATTCTAAATGTGGTTGATGTTTCTTATGGA
GGGGAAAATGGTTTTAACCAAGCAATTGAGCTCTCTGCTGAGATCTTAGCCAATGTGAAG
TTTATACAAGAGAAGAAATTGATAGGCAAGTACTTTGAGGAGATTAGTCAGGACACTGGG
AAGTACGTCTTTGGGGTGGATGATACATTAAAAGTTCTGGAAATGGGTGCTATTGAGACA
CTTATTGTGTGGGAAAATCTGGATATTATGAGGTATGTGCTGAAAAATAGCGGTTCTGGA
GAAATAGTTGTCAGACACTTCAACAAGGAGCAGGAGGCTGATCAGAGTAACTTCCGTGAT
CCTGTTACAAATGCAGAATTAGAGGTTCAGGAAAAATTGTCACTGCTTGAGTGGTTTGCT
AATGAGTACAGGAAATTTGGTTGTAGTCTGGAATTTGTCACCAACAAGTCACAAGAAGGA
TCTCAGTTTTGTCGAGGTTTTGGTGGTATTGGAGGACTCCTCCGTTATCAGCTTGATGTT
CGAGCTTTTGATGAGCTTTCTGATGATGGTGAAGTTTACGAAGACTCTGACTAG