Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020390
CDS Infomation

pacid=37445682 polypeptide=PGSC0003DMP400013888 locus=PGSC0003DMG400007881 ID=PGSC0003DMT400020390.v4.03 annot-version=v4.03
Sequence

ATGGCTAGGAAAGCTTTTGGCGCTTTGAAAGATTCCACAATGGTTGGGATGGCGAAGGTT
AACAGTGAGTACAAGAAACTTGATGTTGCTATACTCAAAGCCACAAATCATGTCGAGGTA
ATGCCAAAGGAGAAGCATGTACAAACTTTTTTCAATGCGATTTCATGCAACAGACCTCGA
GCAGATGTTGGCTATTGCTTACATACTCTTTCCAAGAGGCTCACCAAAACACATACTTGG
CAAGTTGCGCTAAAAGCTTTAGTTGTTATTCATCGTGCTATGAGGGAAGTTGATATATCA
TTTCTTCAAGAGCTTATTAACTATAGTGCTCATCGAGGCCATTTGTTAAACCTAACACAT
TTCAAGGATGATTCGAGTGCAAATGCATGGGACTATTCTACGTGGATTCGTTCTTATGCT
TTATATCTTGAAGAATACCTTGAATGCTACTGCTTGGTGAAATTTGATTTTCAGAGAGAA
CGAAAGAGAATGAAGGAGTTAAACACTCCAACCTTGATAGAGACAGTACCTTGTTTACAG
AAACTGCTCTCTCGTCTTCTCGATTGCCAGCCAAAGGGAGCAGCTCAATATAACTTCTTG
ATTCAGCATGCCCTTTCGATTGTTGCTGCAGAAAGTGCAAGTCTATATGTAGCAATTGCA
GATGGAATGCTTAACTTAGTGGACAAATTTTTTGAGATGCAACGTCATGATGCAGTTAGA
GCACTTGAAATTTATCGAAGGGCAGGAGATCAGGCAGTAAAGCTATCTGAGTTCTTTGAG
ATATGTAGGAACCTTGATTTTGGACGAGGGCAGAAGTACGTTAAGATAGAAAAGCCTCCG
GAATCATTCATATTAGCGATGGAAGAGTACTTGACTGATGCACCAAAGCCTCTAATGCTT
ACATGGAAGCCGGATGATGATGACAAAAACACCAAGGTCATTGCTGTTCCTGGATCCAAA
CTAGAGACTGATCAAGAGCAAGAAACTGAAGTACAGACGAAAGAAGAGAGTAACGCGGAG
ACTCCTGCCCCGCCTCTCATTCCTGACCTTTTATCTTTTGATGAACCAAGTGAAGATCAA
TCGATTGCACCAGAAGATAACAACAACGCATTAGCTTTAGTTGTTAGTACACCAGATGAG
TTATCGAATTCTTTGAGCAATTCAGATCAAAGTAGTCAACCTACAGGCTGGGAGTTGGAA
CTCGTTACAGCATCAACGGGGGCATCCATAGATCAAAATAAACTGATACAGGGGGGTGTA
CTAGATAGATCAAAGTTGGATAATCTATATGAAACAGCATTGGCAAGACAGAACATTGTA
AATGACCCTTACAATAGGGAAGTTTCGTCTAATCCGTTCGAGGTAGCTGATAATTCACAA
GATGCATTTTATAGCTCAACAAACTCTGGAACAAATGGTGCACAAATGGCTGCTATGGCT
CATTACCATGACTATGGTGTTTTCATGCAACAACAAGTTGCTAATATGTCTCAATCACAC
GAATCGTTCATCGGACAACACGAAGCCTTGATGATGCAGCAACAAATGGCTATTGTGTCT
CTTCAACAACAAACTATGATTCAAGAAAATGAAGCACAAATTCAAGAAAATATAGGTGAT
GTGCCTCAACTACTATTAGAAGGACCAGCAGCATTGGTTAACAATAATGACAAAAATCCA
TTTGGGAATCCTTTTAGTGATCAAGATGTTACAACTAATAATAATGCTTCTCAGGATCAA
TCTCATGTATCTGAAAATCAAAACTCACAGTCTAGCTTAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013888
PEP Infomation

pacid=37445682 transcript=PGSC0003DMT400020390 locus=PGSC0003DMG400007881 ID=PGSC0003DMT400020390.v4.03 annot-version=v4.03
Sequence

MARKAFGALKDSTMVGMAKVNSEYKKLDVAILKATNHVEVMPKEKHVQTFFNAISCNRPR
ADVGYCLHTLSKRLTKTHTWQVALKALVVIHRAMREVDISFLQELINYSAHRGHLLNLTH
FKDDSSANAWDYSTWIRSYALYLEEYLECYCLVKFDFQRERKRMKELNTPTLIETVPCLQ
KLLSRLLDCQPKGAAQYNFLIQHALSIVAAESASLYVAIADGMLNLVDKFFEMQRHDAVR
ALEIYRRAGDQAVKLSEFFEICRNLDFGRGQKYVKIEKPPESFILAMEEYLTDAPKPLML
TWKPDDDDKNTKVIAVPGSKLETDQEQETEVQTKEESNAETPAPPLIPDLLSFDEPSEDQ
SIAPEDNNNALALVVSTPDELSNSLSNSDQSSQPTGWELELVTASTGASIDQNKLIQGGV
LDRSKLDNLYETALARQNIVNDPYNREVSSNPFEVADNSQDAFYSSTNSGTNGAQMAAMA
HYHDYGVFMQQQVANMSQSHESFIGQHEALMMQQQMAIVSLQQQTMIQENEAQIQENIGD
VPQLLLEGPAALVNNNDKNPFGNPFSDQDVTTNNNASQDQSHVSENQNSQSSLI*

Transcript Sequence

Transcript ID

PGSC0003DMT400020390
Transcript Infomation

pacid=37445682 locus=PGSC0003DMG400007881 ID=PGSC0003DMT400020390.v4.03 annot-version=v4.03
Sequence

ATGGCTAGGAAAGCTTTTGGCGCTTTGAAAGATTCCACAATGGTTGGGATGGCGAAGGTT
AACAGTGAGTACAAGAAACTTGATGTTGCTATACTCAAAGCCACAAATCATGTCGAGGTA
ATGCCAAAGGAGAAGCATGTACAAACTTTTTTCAATGCGATTTCATGCAACAGACCTCGA
GCAGATGTTGGCTATTGCTTACATACTCTTTCCAAGAGGCTCACCAAAACACATACTTGG
CAAGTTGCGCTAAAAGCTTTAGTTGTTATTCATCGTGCTATGAGGGAAGTTGATATATCA
TTTCTTCAAGAGCTTATTAACTATAGTGCTCATCGAGGCCATTTGTTAAACCTAACACAT
TTCAAGGATGATTCGAGTGCAAATGCATGGGACTATTCTACGTGGATTCGTTCTTATGCT
TTATATCTTGAAGAATACCTTGAATGCTACTGCTTGGTGAAATTTGATTTTCAGAGAGAA
CGAAAGAGAATGAAGGAGTTAAACACTCCAACCTTGATAGAGACAGTACCTTGTTTACAG
AAACTGCTCTCTCGTCTTCTCGATTGCCAGCCAAAGGGAGCAGCTCAATATAACTTCTTG
ATTCAGCATGCCCTTTCGATTGTTGCTGCAGAAAGTGCAAGTCTATATGTAGCAATTGCA
GATGGAATGCTTAACTTAGTGGACAAATTTTTTGAGATGCAACGTCATGATGCAGTTAGA
GCACTTGAAATTTATCGAAGGGCAGGAGATCAGGCAGTAAAGCTATCTGAGTTCTTTGAG
ATATGTAGGAACCTTGATTTTGGACGAGGGCAGAAGTACGTTAAGATAGAAAAGCCTCCG
GAATCATTCATATTAGCGATGGAAGAGTACTTGACTGATGCACCAAAGCCTCTAATGCTT
ACATGGAAGCCGGATGATGATGACAAAAACACCAAGGTCATTGCTGTTCCTGGATCCAAA
CTAGAGACTGATCAAGAGCAAGAAACTGAAGTACAGACGAAAGAAGAGAGTAACGCGGAG
ACTCCTGCCCCGCCTCTCATTCCTGACCTTTTATCTTTTGATGAACCAAGTGAAGATCAA
TCGATTGCACCAGAAGATAACAACAACGCATTAGCTTTAGTTGTTAGTACACCAGATGAG
TTATCGAATTCTTTGAGCAATTCAGATCAAAGTAGTCAACCTACAGGCTGGGAGTTGGAA
CTCGTTACAGCATCAACGGGGGCATCCATAGATCAAAATAAACTGATACAGGGGGGTGTA
CTAGATAGATCAAAGTTGGATAATCTATATGAAACAGCATTGGCAAGACAGAACATTGTA
AATGACCCTTACAATAGGGAAGTTTCGTCTAATCCGTTCGAGGTAGCTGATAATTCACAA
GATGCATTTTATAGCTCAACAAACTCTGGAACAAATGGTGCACAAATGGCTGCTATGGCT
CATTACCATGACTATGGTGTTTTCATGCAACAACAAGTTGCTAATATGTCTCAATCACAC
GAATCGTTCATCGGACAACACGAAGCCTTGATGATGCAGCAACAAATGGCTATTGTGTCT
CTTCAACAACAAACTATGATTCAAGAAAATGAAGCACAAATTCAAGAAAATATAGGTGAT
GTGCCTCAACTACTATTAGAAGGACCAGCAGCATTGGTTAACAATAATGACAAAAATCCA
TTTGGGAATCCTTTTAGTGATCAAGATGTTACAACTAATAATAATGCTTCTCAGGATCAA
TCTCATGTATCTGAAAATCAAAACTCACAGTCTAGCTTAATCTAA