Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020335
CDS Infomation

pacid=37446241 polypeptide=PGSC0003DMP400013855 locus=PGSC0003DMG400007862 ID=PGSC0003DMT400020335.v4.03 annot-version=v4.03
Sequence

ATGTCTCTGAATGCCAACCATTTGACTGGAGAAATTCCTGATTCCTTTCAAGGCCTTACC
GCTTTGGTCAATCTTGATTTGTCAAGTAACAATATAAGTGGATCATTGCCACCATCTGTA
AGAAATTTGTCTTCCTTGACCACTCTATATTTGCAGAATAATCAGCTTTCTGGAACTCTT
GATGTTTTGCAGGATCTTCCCCTTGCAAATTTGAATGTGGAAAACAACTTGTTTTCTGGG
CCCATACCTCAAAAGTTGTTCTCTATTCCCAATTTCAAAAAAGATGGAAATCTTTTCAAC
AGTAGTATTGCTCCTTTACCTCCACCCACATCATCAACAGCACCTCCCATTTCTGGGTCT
CCAACTTCAGCACAGACGCCATCTTCTCAAAGCAAACCTAAAACACAGGCCGATGGACCA
TCAGCATCTGCAGAATCAAGTTCAACAGGAAAAAAAAAGTCTTTATCTGCTAAAAGGGTG
GTCTGGATATCAATTGCAGCAGTTTTGTCATTTATCATATTGGTTTTAGCAATCCTTCTC
TGTCTGCCAAAGTGCCTCAGGAAATGGCACGAGACTCAAAGAACGCCCAAACACCATGAA
ATAGCCCCTTATATGGGTGCTAGAGAGAATCTTGGAGATAGTGGTTCATTAGTCCAACCT
GGCCATGATATAGAAAAAGCTCCCCTAGTTGTGACGCCAAAAGAAAAGCAACCAAGAAGA
CCGGTTCCCGTTCCGAAGCCACAAGATGAGCAGCAGGTAAATGTGCAAACCATGAGTGCA
GTGCCAAAGAAGGATGATAGTGAGATAAACCTTGGCAGATTGGATATTGATTTGATGCCA
CCACCTCCGCCTCCTCCTCCGCCGACTCTTCCGCAAGAGAGAGTTATTGTCAAGCCGATT
GCGCCTGCTGAAGATACAGCAACGAGGCTTCCAACCAGGCCACTTCCACTAACTTCTGTG
AAATCTTACACAATTGCATCACTTCAGCAATACACTAATAGCTTCTCTCAAGATAATCTG
TTGGGATTAGGAATGCTGGGTAGTGTATACAGGGTGGAGCTTCCTAATGGAAAGTTGCTT
GCTGTCAAAAAGCTGGACAAAAGAGTTTGCGATCAACAAAAGGATGATGAGTTTCTTGAC
CTAGTAAACAATATTGACAGAATTCGTCATGCTAATGTTGTTGAGCTGATGGGCTATTGT
GCAGAGCATGGTCAAAGGCTTCTGGTCTATGAGTATTGCTGTAACGGGACACTACAAGAT
GCACTGCATTGCGACGATGAATTCAAGAGACAACTTTCATGGAATACTCGCATGAGGATG
GCTCTTGGAGCTGCAAGAGCGTTAGAGTATCTCCATGAAGTCTGCGAGCCACCTATTATT
CATAGAAACTTCAAGTCTGCCAATCTTCTGCTTGATGAGGAGTTGGCTGTACATGTTTCA
GATTGTGGTTTGGCTCCACTTATATCATCTGGTGCTGTGAGTCAGTTGTCGGGACAACTT
CTCACAACATATGGCTACGGTGCTCCCGAATTTGAGTCAGGGATTTACACTTCCCAAAGT
GATGTTTACAGTTTTGGTGTGGTGATGCTGGAACTAATAACAGGCAGAATGTCATATGAC
CGGACACGGAGTCGAGGAGAGCAGTTCTTGGTCAGGTGGGCAATCCCTCAGCTACACGAT
ATTGATCTCTTGACAAGGATGGTTGATCCTGCTCTCGATGGAAAATACCCCATTAAATCA
CTATCACACTTTGCTGACATAATTTCTCGCTGTGTTCAGCATGAGCGAGAATTCAGGCCA
CCAATGTCAGAAGTTGTTCAGGACCTCATACAAATGATAAGAAGAGAGTCTCACAAAAGA
TCTGATGGTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400013855
PEP Infomation

pacid=37446241 transcript=PGSC0003DMT400020335 locus=PGSC0003DMG400007862 ID=PGSC0003DMT400020335.v4.03 annot-version=v4.03
Sequence

MSLNANHLTGEIPDSFQGLTALVNLDLSSNNISGSLPPSVRNLSSLTTLYLQNNQLSGTL
DVLQDLPLANLNVENNLFSGPIPQKLFSIPNFKKDGNLFNSSIAPLPPPTSSTAPPISGS
PTSAQTPSSQSKPKTQADGPSASAESSSTGKKKSLSAKRVVWISIAAVLSFIILVLAILL
CLPKCLRKWHETQRTPKHHEIAPYMGARENLGDSGSLVQPGHDIEKAPLVVTPKEKQPRR
PVPVPKPQDEQQVNVQTMSAVPKKDDSEINLGRLDIDLMPPPPPPPPPTLPQERVIVKPI
APAEDTATRLPTRPLPLTSVKSYTIASLQQYTNSFSQDNLLGLGMLGSVYRVELPNGKLL
AVKKLDKRVCDQQKDDEFLDLVNNIDRIRHANVVELMGYCAEHGQRLLVYEYCCNGTLQD
ALHCDDEFKRQLSWNTRMRMALGAARALEYLHEVCEPPIIHRNFKSANLLLDEELAVHVS
DCGLAPLISSGAVSQLSGQLLTTYGYGAPEFESGIYTSQSDVYSFGVVMLELITGRMSYD
RTRSRGEQFLVRWAIPQLHDIDLLTRMVDPALDGKYPIKSLSHFADIISRCVQHEREFRP
PMSEVVQDLIQMIRRESHKRSDGE*

Transcript Sequence

Transcript ID

PGSC0003DMT400020335
Transcript Infomation

pacid=37446241 locus=PGSC0003DMG400007862 ID=PGSC0003DMT400020335.v4.03 annot-version=v4.03
Sequence

ATGTCTCTGAATGCCAACCATTTGACTGGAGAAATTCCTGATTCCTTTCAAGGCCTTACC
GCTTTGGTCAATCTTGATTTGTCAAGTAACAATATAAGTGGATCATTGCCACCATCTGTA
AGAAATTTGTCTTCCTTGACCACTCTATATTTGCAGAATAATCAGCTTTCTGGAACTCTT
GATGTTTTGCAGGATCTTCCCCTTGCAAATTTGAATGTGGAAAACAACTTGTTTTCTGGG
CCCATACCTCAAAAGTTGTTCTCTATTCCCAATTTCAAAAAAGATGGAAATCTTTTCAAC
AGTAGTATTGCTCCTTTACCTCCACCCACATCATCAACAGCACCTCCCATTTCTGGGTCT
CCAACTTCAGCACAGACGCCATCTTCTCAAAGCAAACCTAAAACACAGGCCGATGGACCA
TCAGCATCTGCAGAATCAAGTTCAACAGGAAAAAAAAAGTCTTTATCTGCTAAAAGGGTG
GTCTGGATATCAATTGCAGCAGTTTTGTCATTTATCATATTGGTTTTAGCAATCCTTCTC
TGTCTGCCAAAGTGCCTCAGGAAATGGCACGAGACTCAAAGAACGCCCAAACACCATGAA
ATAGCCCCTTATATGGGTGCTAGAGAGAATCTTGGAGATAGTGGTTCATTAGTCCAACCT
GGCCATGATATAGAAAAAGCTCCCCTAGTTGTGACGCCAAAAGAAAAGCAACCAAGAAGA
CCGGTTCCCGTTCCGAAGCCACAAGATGAGCAGCAGGTAAATGTGCAAACCATGAGTGCA
GTGCCAAAGAAGGATGATAGTGAGATAAACCTTGGCAGATTGGATATTGATTTGATGCCA
CCACCTCCGCCTCCTCCTCCGCCGACTCTTCCGCAAGAGAGAGTTATTGTCAAGCCGATT
GCGCCTGCTGAAGATACAGCAACGAGGCTTCCAACCAGGCCACTTCCACTAACTTCTGTG
AAATCTTACACAATTGCATCACTTCAGCAATACACTAATAGCTTCTCTCAAGATAATCTG
TTGGGATTAGGAATGCTGGGTAGTGTATACAGGGTGGAGCTTCCTAATGGAAAGTTGCTT
GCTGTCAAAAAGCTGGACAAAAGAGTTTGCGATCAACAAAAGGATGATGAGTTTCTTGAC
CTAGTAAACAATATTGACAGAATTCGTCATGCTAATGTTGTTGAGCTGATGGGCTATTGT
GCAGAGCATGGTCAAAGGCTTCTGGTCTATGAGTATTGCTGTAACGGGACACTACAAGAT
GCACTGCATTGCGACGATGAATTCAAGAGACAACTTTCATGGAATACTCGCATGAGGATG
GCTCTTGGAGCTGCAAGAGCGTTAGAGTATCTCCATGAAGTCTGCGAGCCACCTATTATT
CATAGAAACTTCAAGTCTGCCAATCTTCTGCTTGATGAGGAGTTGGCTGTACATGTTTCA
GATTGTGGTTTGGCTCCACTTATATCATCTGGTGCTGTGAGTCAGTTGTCGGGACAACTT
CTCACAACATATGGCTACGGTGCTCCCGAATTTGAGTCAGGGATTTACACTTCCCAAAGT
GATGTTTACAGTTTTGGTGTGGTGATGCTGGAACTAATAACAGGCAGAATGTCATATGAC
CGGACACGGAGTCGAGGAGAGCAGTTCTTGGTCAGGTGGGCAATCCCTCAGCTACACGAT
ATTGATCTCTTGACAAGGATGGTTGATCCTGCTCTCGATGGAAAATACCCCATTAAATCA
CTATCACACTTTGCTGACATAATTTCTCGCTGTGTTCAGCATGAGCGAGAATTCAGGCCA
CCAATGTCAGAAGTTGTTCAGGACCTCATACAAATGATAAGAAGAGAGTCTCACAAAAGA
TCTGATGGTGAATGA