Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020325
CDS Infomation

pacid=37446679 polypeptide=PGSC0003DMP400013848 locus=PGSC0003DMG400007859 ID=PGSC0003DMT400020325.v4.03 annot-version=v4.03
Sequence

ATGGCGACACCGGCGGCTACTTCTTTCTCCATTTCCTCCTCCTCCTCGGCCGTTTCTTCA
TCAACCAAATCCCTAAAGCCTGCTCTATCTAGTAACTTAGGGTTTTTTTCTACTTCATCT
CCGTCGCTTAAGGCTCTCAGAGCTAAATCTCACTCCTACAATGTCTCCAGCTCCGGCGGA
GCACTTAATGTTCGTATGGTTGCTGCTCCTGCTGCTGTAAAGGCACCGATGTCTCTCGAT
TTTGAAACATCTGTTTTTAAGAAGGAGAAAGTTACCCTTTCTGGACACGACGAGTACATT
GTGAAAGGAGGGAGAGATTTGTTCAAGTTGTTGCCGGATGCATTCAAGGGAATCAAGCAG
ATTGGAGTCATTGGTTGGGGTTCTCAGGGACCAGCTCAAGCCCAGAACTTGAGGGATTCT
CTTGCAGAAGCAAAATCTGATATAGTCGTTAAGATTGGTTTGAGAAAGGGTTCTCGCTCC
TTTGCTGAGGCTCGTGCAGCTGGGTTTACTGAAGAAAATGGTACCTTGGGAGACTTGTAT
GAAACTATCTCTGGTAGCGATCTAGTGCTGCTTTTGATTTCTGATGCAGCTCAGGCTGAC
AACTATGAAGAAGTGTTTTCTCACATGAAACCAAATAGCATACTTGGTCTTTCGCATGGA
TTCCTTCTCGGCCATTTGCAGTCATTGGACCTTGACTTTCCCAAGAACATCAGTGTGATT
GCTGTATGTCCCAAGGGAATGGGCCCATCTGTCCGGAGATTATATGTGCAAGGAAAAGAA
ATCAATGGTGCTGGAATTAATGCAAGTTTTGCAGTTCACCAGGATATAGATGGAAGAGCC
ACTGATGTTGCTCTTGGGTGGTCAGTTGCCCTTGGTTCCCCCTTTACATTTGCAACTACC
CTGGAACAGGAATACAGAAGCGATATATTTGGCGAGCGAGGCATATTACTTGGTGCTGTC
CATGGCATTGTTGAGTCATTGTTCAGAAGGTACACAGAAAATGGAATGAGTGAAGAGCTC
GCATACAAGAATACTGTTGAGTGCATAACCGGAAACATTTCGAGGACCATATCAACAAAG
GGTATGTTAGCTCTATACAATTCATTGGATGCAGAAGGCAAGAAGGTGTTTGCGACTGCA
TATAGTGCTTCATATTACCCTTGCATGGAGATCTTGTACGAGTGCTATGAGGATGTTGCA
GCAGGTAGTGAGATCAGGAGTGTTGTATTGGCAGGTCGCCGCTTTTCTGAGAAAGAGGGG
TTACCAGCTTTCCCAATGGGTAAAATAGACCAGACAAGGATGTGGAAAGTTGGTGAGCGT
GTTCGTGCAACACGACCATCTGGTGATCTGGGTCCTCTCTATCCTTTCACTGCTGGTGTC
TATGTCGCATTGATGATGGCTCAGATTGAGGTTCTGAGGAAGAAAGGCCACTCTTACTCA
GAGATCATAAATGAAAGTGTCATCGAGTCTGTTGATTCCCTGAATCCCTTCATGCATGCA
CGTGGAGTGTCATTCATGGTTGACAATTGCTCTACAACAGCGCGTTTGGGATCTAGGAAG
TGGGCTCCTCGATTTGATTACAATCTCACCCAGCAAGCACTGGTTGCTGTCGACAATAAC
CTGCCAATCAATATGGATCTTATGACCAATTTCGTATGTGATCCTGTCCATGAAGCTATT
GAAGTTTGTGCCCAATTGAGACCTACAGTCGACATTTCAGTTCCTGCAGATGCTGACTTT
GTCCGTCCCGAGCTCAGACAAACTGTCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013848
PEP Infomation

pacid=37446679 transcript=PGSC0003DMT400020325 locus=PGSC0003DMG400007859 ID=PGSC0003DMT400020325.v4.03 annot-version=v4.03
Sequence

MATPAATSFSISSSSSAVSSSTKSLKPALSSNLGFFSTSSPSLKALRAKSHSYNVSSSGG
ALNVRMVAAPAAVKAPMSLDFETSVFKKEKVTLSGHDEYIVKGGRDLFKLLPDAFKGIKQ
IGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSRSFAEARAAGFTEENGTLGDLY
ETISGSDLVLLLISDAAQADNYEEVFSHMKPNSILGLSHGFLLGHLQSLDLDFPKNISVI
AVCPKGMGPSVRRLYVQGKEINGAGINASFAVHQDIDGRATDVALGWSVALGSPFTFATT
LEQEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEELAYKNTVECITGNISRTISTK
GMLALYNSLDAEGKKVFATAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFSEKEG
LPAFPMGKIDQTRMWKVGERVRATRPSGDLGPLYPFTAGVYVALMMAQIEVLRKKGHSYS
EIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYNLTQQALVAVDNN
LPINMDLMTNFVCDPVHEAIEVCAQLRPTVDISVPADADFVRPELRQTVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400020325
Transcript Infomation

pacid=37446679 locus=PGSC0003DMG400007859 ID=PGSC0003DMT400020325.v4.03 annot-version=v4.03
Sequence

ATGGCGACACCGGCGGCTACTTCTTTCTCCATTTCCTCCTCCTCCTCGGCCGTTTCTTCA
TCAACCAAATCCCTAAAGCCTGCTCTATCTAGTAACTTAGGGTTTTTTTCTACTTCATCT
CCGTCGCTTAAGGCTCTCAGAGCTAAATCTCACTCCTACAATGTCTCCAGCTCCGGCGGA
GCACTTAATGTTCGTATGGTTGCTGCTCCTGCTGCTGTAAAGGCACCGATGTCTCTCGAT
TTTGAAACATCTGTTTTTAAGAAGGAGAAAGTTACCCTTTCTGGACACGACGAGTACATT
GTGAAAGGAGGGAGAGATTTGTTCAAGTTGTTGCCGGATGCATTCAAGGGAATCAAGCAG
ATTGGAGTCATTGGTTGGGGTTCTCAGGGACCAGCTCAAGCCCAGAACTTGAGGGATTCT
CTTGCAGAAGCAAAATCTGATATAGTCGTTAAGATTGGTTTGAGAAAGGGTTCTCGCTCC
TTTGCTGAGGCTCGTGCAGCTGGGTTTACTGAAGAAAATGGTACCTTGGGAGACTTGTAT
GAAACTATCTCTGGTAGCGATCTAGTGCTGCTTTTGATTTCTGATGCAGCTCAGGCTGAC
AACTATGAAGAAGTGTTTTCTCACATGAAACCAAATAGCATACTTGGTCTTTCGCATGGA
TTCCTTCTCGGCCATTTGCAGTCATTGGACCTTGACTTTCCCAAGAACATCAGTGTGATT
GCTGTATGTCCCAAGGGAATGGGCCCATCTGTCCGGAGATTATATGTGCAAGGAAAAGAA
ATCAATGGTGCTGGAATTAATGCAAGTTTTGCAGTTCACCAGGATATAGATGGAAGAGCC
ACTGATGTTGCTCTTGGGTGGTCAGTTGCCCTTGGTTCCCCCTTTACATTTGCAACTACC
CTGGAACAGGAATACAGAAGCGATATATTTGGCGAGCGAGGCATATTACTTGGTGCTGTC
CATGGCATTGTTGAGTCATTGTTCAGAAGGTACACAGAAAATGGAATGAGTGAAGAGCTC
GCATACAAGAATACTGTTGAGTGCATAACCGGAAACATTTCGAGGACCATATCAACAAAG
GGTATGTTAGCTCTATACAATTCATTGGATGCAGAAGGCAAGAAGGTGTTTGCGACTGCA
TATAGTGCTTCATATTACCCTTGCATGGAGATCTTGTACGAGTGCTATGAGGATGTTGCA
GCAGGTAGTGAGATCAGGAGTGTTGTATTGGCAGGTCGCCGCTTTTCTGAGAAAGAGGGG
TTACCAGCTTTCCCAATGGGTAAAATAGACCAGACAAGGATGTGGAAAGTTGGTGAGCGT
GTTCGTGCAACACGACCATCTGGTGATCTGGGTCCTCTCTATCCTTTCACTGCTGGTGTC
TATGTCGCATTGATGATGGCTCAGATTGAGGTTCTGAGGAAGAAAGGCCACTCTTACTCA
GAGATCATAAATGAAAGTGTCATCGAGTCTGTTGATTCCCTGAATCCCTTCATGCATGCA
CGTGGAGTGTCATTCATGGTTGACAATTGCTCTACAACAGCGCGTTTGGGATCTAGGAAG
TGGGCTCCTCGATTTGATTACAATCTCACCCAGCAAGCACTGGTTGCTGTCGACAATAAC
CTGCCAATCAATATGGATCTTATGACCAATTTCGTATGTGATCCTGTCCATGAAGCTATT
GAAGTTTGTGCCCAATTGAGACCTACAGTCGACATTTCAGTTCCTGCAGATGCTGACTTT
GTCCGTCCCGAGCTCAGACAAACTGTCAACTAA