Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020301
CDS Infomation

pacid=37447812 polypeptide=PGSC0003DMP400013835 locus=PGSC0003DMG400007849 ID=PGSC0003DMT400020301.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAGAAACAGTAAATCTTGAACAAGAGGTTGTTTTGGTTGAAGAACTTGGAAAT
GTTAGAGTTGTTACCTTGAATAACCCAAAACAGTTGAATATCATTTCACCCAAAGTGGTA
GAACCGCTGGCAGCGAATCTCGAGAAGTGGGAGGAAGATGAGAAAGCAAAACTTGTTATC
ATCAAGGGAGCTGGCCGCGCTTTTTCTGCTGGCGGGGATTTGAAAATGTTCTATAATGGC
AGGAATTCAAAGGATTCCTGCCTCGAAGTTGTTTATCGAATGTACTGGCTTTGCAATCAC
ATTCATACATATAAGAAAACCATGGTTGCTCTTGTTCATGGAATCTCAATGGGTGGAGGT
GCATCCTTAATGGCTCCAATGAAGTTCTCTGTTGTGACTGAAAAGACGGTTTTCTCCACT
CCTGAAGCAAGTATAGGCTTCCACACGGACTGTGGTTTCTCATACATGCTTTCTCGGCTT
CCTGGTAGACTCGGGGAATACTTGGGTTTAACTGGAGCGAGGCTGAACGGTAAAGAATTG
ATTGCTGCTGGACTTGCAACACATTTTGTACCTCTGGAGAAACTGCCAGAGCTAGAGAAG
CACTTACTAAGCTTAAACACTGGCGACGAGGATGCTGTCGGATTTGCAATCAAGGAATTC
TCGACAGACGTTCAGATCGATGAAGAAAGTATCTTGAAAAAGCAGTCAATAATTGATGAG
TGCTTCTCCAAGGATTCGGTTGCAGATATTATCAGTTCATTTGAAACTGAAGCTGGCAAA
GAGGGAAATGGTTGGATTGTGCCGGTGCTTAAAGGCCTAAAACGGTCATCCCCAACAGGT
CTAAAAATCACTCTAAGATCGATTCGGGAAGGGAGGAAGCAAACCTTATCTGAATGTCTG
AAGAAAGAATTCAGAATAACAATACATACACTAAGAGCAAGAATATCTGGTGATGTCTAT
GAGGGTATCAGAGCTCTTACCATCGACAAGGACAATTCTCCGAAAGTATGTCTCTCTCAC
TCACACACACACTCACACATTTTCGGGGACATTTTGTGTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013835
PEP Infomation

pacid=37447812 transcript=PGSC0003DMT400020301 locus=PGSC0003DMG400007849 ID=PGSC0003DMT400020301.v4.03 annot-version=v4.03
Sequence

MAQETVNLEQEVVLVEELGNVRVVTLNNPKQLNIISPKVVEPLAANLEKWEEDEKAKLVI
IKGAGRAFSAGGDLKMFYNGRNSKDSCLEVVYRMYWLCNHIHTYKKTMVALVHGISMGGG
ASLMAPMKFSVVTEKTVFSTPEASIGFHTDCGFSYMLSRLPGRLGEYLGLTGARLNGKEL
IAAGLATHFVPLEKLPELEKHLLSLNTGDEDAVGFAIKEFSTDVQIDEESILKKQSIIDE
CFSKDSVADIISSFETEAGKEGNGWIVPVLKGLKRSSPTGLKITLRSIREGRKQTLSECL
KKEFRITIHTLRARISGDVYEGIRALTIDKDNSPKVCLSHSHTHSHIFGDILCF*

Transcript Sequence

Transcript ID

PGSC0003DMT400020301
Transcript Infomation

pacid=37447812 locus=PGSC0003DMG400007849 ID=PGSC0003DMT400020301.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAGAAACAGTAAATCTTGAACAAGAGGTTGTTTTGGTTGAAGAACTTGGAAAT
GTTAGAGTTGTTACCTTGAATAACCCAAAACAGTTGAATATCATTTCACCCAAAGTGGTA
GAACCGCTGGCAGCGAATCTCGAGAAGTGGGAGGAAGATGAGAAAGCAAAACTTGTTATC
ATCAAGGGAGCTGGCCGCGCTTTTTCTGCTGGCGGGGATTTGAAAATGTTCTATAATGGC
AGGAATTCAAAGGATTCCTGCCTCGAAGTTGTTTATCGAATGTACTGGCTTTGCAATCAC
ATTCATACATATAAGAAAACCATGGTTGCTCTTGTTCATGGAATCTCAATGGGTGGAGGT
GCATCCTTAATGGCTCCAATGAAGTTCTCTGTTGTGACTGAAAAGACGGTTTTCTCCACT
CCTGAAGCAAGTATAGGCTTCCACACGGACTGTGGTTTCTCATACATGCTTTCTCGGCTT
CCTGGTAGACTCGGGGAATACTTGGGTTTAACTGGAGCGAGGCTGAACGGTAAAGAATTG
ATTGCTGCTGGACTTGCAACACATTTTGTACCTCTGGAGAAACTGCCAGAGCTAGAGAAG
CACTTACTAAGCTTAAACACTGGCGACGAGGATGCTGTCGGATTTGCAATCAAGGAATTC
TCGACAGACGTTCAGATCGATGAAGAAAGTATCTTGAAAAAGCAGTCAATAATTGATGAG
TGCTTCTCCAAGGATTCGGTTGCAGATATTATCAGTTCATTTGAAACTGAAGCTGGCAAA
GAGGGAAATGGTTGGATTGTGCCGGTGCTTAAAGGCCTAAAACGGTCATCCCCAACAGGT
CTAAAAATCACTCTAAGATCGATTCGGGAAGGGAGGAAGCAAACCTTATCTGAATGTCTG
AAGAAAGAATTCAGAATAACAATACATACACTAAGAGCAAGAATATCTGGTGATGTCTAT
GAGGGTATCAGAGCTCTTACCATCGACAAGGACAATTCTCCGAAAGTATGTCTCTCTCAC
TCACACACACACTCACACATTTTCGGGGACATTTTGTGTTTCTAA