Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020297
CDS Infomation

pacid=37446787 polypeptide=PGSC0003DMP400013832 locus=PGSC0003DMG400007848 ID=PGSC0003DMT400020297.v4.03 annot-version=v4.03
Sequence

ATGGGTCCACGTTTGTTGCATGGTACTCTTCATGCTACAATTTATGAAATTGATAAGATA
AGGACTGGTTGTGCTGATTGTTGTGGACCGACATCTCCCCAGAAACTAACCAAAAGAGTT
TTGAACAATGTCAAGAAATTGTTCTTCTGCGCGCCAAAGATTTCTGCTACAAAACTTTAT
GCAACCATAGATTTAGATAAGGCTAGAGTTGGAAGAACTAGAATCGCGGAAAATGAGCCT
TCCAACCCTCATTGGAATGACACATTTCGATTCTACTGTGCTCATGAGGTTTCTAACATC
ATTTTTACAGTAAAAGATGAGAATCCTGTTAGTGCAACACTAATTGGAAGAGCTTATCTC
CCTGTTGAGGAAGTCTTGAATCGATATATAGTCGATAGATGGGTACCTATAGTAGATGAA
GAGAGGCATCCGATAAGTGGTCATTCAAAAATCCATGTAAGGTTGCAGTTCTATAGCGTA
AAGCAAGACAGTAATTGGTCTAGAGGCATTACCTCCCCTGCATTTGGAGGAGTCCCGTAT
ACGTTTTTCAAGGAGAGACAGGGGTGTCAAGTTACACTTTACCCCGATGCAGACATTTCA
GACGATGATATCACAAATTATCTCAAGTCACAAGGACTTTTTGAACCTCAGAGATGTTGG
GAAGATATTTTTGATGCAATCAACAATGCAAAGCATATGATTTATATAGCCGGATGGTCT
GTGTATACGAAAATTACCTTGATAAGAAATCCAAAAAGGCCAAAGGTAGGTGGAGAACTT
ACTCTCGGGGAGCTCCTGAAAAAGAAAGCAAGTGAAGGAGTTAATGTTCTTTTGTTAGTT
TGGGATGATATAACTTCAGATGAGGTACTAAAAAGAGATGGACTAATGTCAACTCATGAT
CAAGAAACCGCGGATTATTTTAAGAACACAGATGTCCACTGTTGTTTATGTCCGCGTAAT
GCTGATAGTGGAAAGACAGTGATTCAGGGGTTTCAAGTTGGTACAATGTTTACTCATCAT
CAAAAGACGATTGTTGTAGACACTGAAATTCCAGGAGGGATGTCACATAAAAGGATGATA
GTGAGTTTTCTTGGTGGTATTGATCTTTGTGATGGACGATATGATACTCGAGATCACTCA
TTATTCAGGACATTGGACACAGTACATAAGCAAGATTTCTATCAGCCTACCTTTCCAGGT
TCTTCAATCGCGAAAGGTGGTCCAAGAGAGCCTTGGCATGACATTCATTGTAGGCTAGAA
GGGCCCGTTGCGTGGGATGTCTTGTATAATTTTGAGCAAAGGTGGAGGAAGCAGATTGGA
AATAGATTTATCTACTCAATGAATGAGCTTGATAAGTTTATTATTCGTCCAACGGAAGTT
ACAGCATCAAGAGATAGAGAAACCTGGAATGTTCAAATATTTCGGTCTATTGATGGTGGT
GCTGTTACTGACTTCCCTGTAAACCCCGAAGAAGCTTCTGAGGTAGGCCTTGTTACTGGG
AAAAACAACGTCATTGATCAAAGTATCCATGATGCATACATTAGTGCCATTCGTCGAGCT
AAGAACTTCATTTACATTGAAAACCAATACTTTATTGGAAGTTGCTATGGTTGGAAGCCT
GCAAATGATATCAAGCTCGAGGATATCGGAGCTTTGCATCTTATCCCAAAGGAGATCTCA
CTTAAGATTGTGAGCAAGATTCAAGCAGGGGAGAGATTTACGGTCTATATTGTTCTACCG
ATGTGGCCAGAAGGTATACCGGAAAGTGATTCTGTTCAGGCAATTCTAGATTGGCAAAAA
AGGACAATGGAAATGATGTACACAGACATATGCAATGCCCTTAAGGCCAAGGGAAATACT
ACTGCTGATCCTAGAGAGTACTTGACATTCTTCTGTCTTGGAAACCGTGAAGTCGAAAAG
CTTGGAGAATACAAACCTCCTCAGAAACCAGTTCCAGATACTAATTATGCAAGAGCTCAA
GAATTCAGACGCTTTATGATCTACGTTCATTCAAAACTGATGATCGTTGATGATGAATAC
ATTATAATTGGATCTGCTAACATCAATCAAAGGTCAATGGATGGTGCAAGAGATTCTGAG
ATTGCTATGGGTGGCTACCAACCATATCATCTTGCATCTAATCAACCACCTAGAGGAAAA
ATCTACGGTTTTCGAATGTCCTTATGGTGTGAACATCTAAACTATGCAGATGACTCTTTC
GCGGATCCCTCGAGTCTAGAATGTGTTAGGAAAGTAAATGGCATGGCTGAAGAAAGCTGG
AAACTTTATTCAAGTGATACATTTGATCTAGATCTTCCAGGCCACCTTCTTCGCTACCCT
ATCGATATTTCGAACACAGGACAGATTACAACACTTCCTGGATTCAAGTTCTTCCCAGAC
ACAAAAGCTGCTATTCTTGGCAACAAATCTCAGTATCTCCCACCTATTCTCACTACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400013832
PEP Infomation

pacid=37446787 transcript=PGSC0003DMT400020297 locus=PGSC0003DMG400007848 ID=PGSC0003DMT400020297.v4.03 annot-version=v4.03
Sequence

MGPRLLHGTLHATIYEIDKIRTGCADCCGPTSPQKLTKRVLNNVKKLFFCAPKISATKLY
ATIDLDKARVGRTRIAENEPSNPHWNDTFRFYCAHEVSNIIFTVKDENPVSATLIGRAYL
PVEEVLNRYIVDRWVPIVDEERHPISGHSKIHVRLQFYSVKQDSNWSRGITSPAFGGVPY
TFFKERQGCQVTLYPDADISDDDITNYLKSQGLFEPQRCWEDIFDAINNAKHMIYIAGWS
VYTKITLIRNPKRPKVGGELTLGELLKKKASEGVNVLLLVWDDITSDEVLKRDGLMSTHD
QETADYFKNTDVHCCLCPRNADSGKTVIQGFQVGTMFTHHQKTIVVDTEIPGGMSHKRMI
VSFLGGIDLCDGRYDTRDHSLFRTLDTVHKQDFYQPTFPGSSIAKGGPREPWHDIHCRLE
GPVAWDVLYNFEQRWRKQIGNRFIYSMNELDKFIIRPTEVTASRDRETWNVQIFRSIDGG
AVTDFPVNPEEASEVGLVTGKNNVIDQSIHDAYISAIRRAKNFIYIENQYFIGSCYGWKP
ANDIKLEDIGALHLIPKEISLKIVSKIQAGERFTVYIVLPMWPEGIPESDSVQAILDWQK
RTMEMMYTDICNALKAKGNTTADPREYLTFFCLGNREVEKLGEYKPPQKPVPDTNYARAQ
EFRRFMIYVHSKLMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLASNQPPRGK
IYGFRMSLWCEHLNYADDSFADPSSLECVRKVNGMAEESWKLYSSDTFDLDLPGHLLRYP
IDISNTGQITTLPGFKFFPDTKAAILGNKSQYLPPILTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400020297
Transcript Infomation

pacid=37446787 locus=PGSC0003DMG400007848 ID=PGSC0003DMT400020297.v4.03 annot-version=v4.03
Sequence

ATGGGTCCACGTTTGTTGCATGGTACTCTTCATGCTACAATTTATGAAATTGATAAGATA
AGGACTGGTTGTGCTGATTGTTGTGGACCGACATCTCCCCAGAAACTAACCAAAAGAGTT
TTGAACAATGTCAAGAAATTGTTCTTCTGCGCGCCAAAGATTTCTGCTACAAAACTTTAT
GCAACCATAGATTTAGATAAGGCTAGAGTTGGAAGAACTAGAATCGCGGAAAATGAGCCT
TCCAACCCTCATTGGAATGACACATTTCGATTCTACTGTGCTCATGAGGTTTCTAACATC
ATTTTTACAGTAAAAGATGAGAATCCTGTTAGTGCAACACTAATTGGAAGAGCTTATCTC
CCTGTTGAGGAAGTCTTGAATCGATATATAGTCGATAGATGGGTACCTATAGTAGATGAA
GAGAGGCATCCGATAAGTGGTCATTCAAAAATCCATGTAAGGTTGCAGTTCTATAGCGTA
AAGCAAGACAGTAATTGGTCTAGAGGCATTACCTCCCCTGCATTTGGAGGAGTCCCGTAT
ACGTTTTTCAAGGAGAGACAGGGGTGTCAAGTTACACTTTACCCCGATGCAGACATTTCA
GACGATGATATCACAAATTATCTCAAGTCACAAGGACTTTTTGAACCTCAGAGATGTTGG
GAAGATATTTTTGATGCAATCAACAATGCAAAGCATATGATTTATATAGCCGGATGGTCT
GTGTATACGAAAATTACCTTGATAAGAAATCCAAAAAGGCCAAAGGTAGGTGGAGAACTT
ACTCTCGGGGAGCTCCTGAAAAAGAAAGCAAGTGAAGGAGTTAATGTTCTTTTGTTAGTT
TGGGATGATATAACTTCAGATGAGGTACTAAAAAGAGATGGACTAATGTCAACTCATGAT
CAAGAAACCGCGGATTATTTTAAGAACACAGATGTCCACTGTTGTTTATGTCCGCGTAAT
GCTGATAGTGGAAAGACAGTGATTCAGGGGTTTCAAGTTGGTACAATGTTTACTCATCAT
CAAAAGACGATTGTTGTAGACACTGAAATTCCAGGAGGGATGTCACATAAAAGGATGATA
GTGAGTTTTCTTGGTGGTATTGATCTTTGTGATGGACGATATGATACTCGAGATCACTCA
TTATTCAGGACATTGGACACAGTACATAAGCAAGATTTCTATCAGCCTACCTTTCCAGGT
TCTTCAATCGCGAAAGGTGGTCCAAGAGAGCCTTGGCATGACATTCATTGTAGGCTAGAA
GGGCCCGTTGCGTGGGATGTCTTGTATAATTTTGAGCAAAGGTGGAGGAAGCAGATTGGA
AATAGATTTATCTACTCAATGAATGAGCTTGATAAGTTTATTATTCGTCCAACGGAAGTT
ACAGCATCAAGAGATAGAGAAACCTGGAATGTTCAAATATTTCGGTCTATTGATGGTGGT
GCTGTTACTGACTTCCCTGTAAACCCCGAAGAAGCTTCTGAGGTAGGCCTTGTTACTGGG
AAAAACAACGTCATTGATCAAAGTATCCATGATGCATACATTAGTGCCATTCGTCGAGCT
AAGAACTTCATTTACATTGAAAACCAATACTTTATTGGAAGTTGCTATGGTTGGAAGCCT
GCAAATGATATCAAGCTCGAGGATATCGGAGCTTTGCATCTTATCCCAAAGGAGATCTCA
CTTAAGATTGTGAGCAAGATTCAAGCAGGGGAGAGATTTACGGTCTATATTGTTCTACCG
ATGTGGCCAGAAGGTATACCGGAAAGTGATTCTGTTCAGGCAATTCTAGATTGGCAAAAA
AGGACAATGGAAATGATGTACACAGACATATGCAATGCCCTTAAGGCCAAGGGAAATACT
ACTGCTGATCCTAGAGAGTACTTGACATTCTTCTGTCTTGGAAACCGTGAAGTCGAAAAG
CTTGGAGAATACAAACCTCCTCAGAAACCAGTTCCAGATACTAATTATGCAAGAGCTCAA
GAATTCAGACGCTTTATGATCTACGTTCATTCAAAACTGATGATCGTTGATGATGAATAC
ATTATAATTGGATCTGCTAACATCAATCAAAGGTCAATGGATGGTGCAAGAGATTCTGAG
ATTGCTATGGGTGGCTACCAACCATATCATCTTGCATCTAATCAACCACCTAGAGGAAAA
ATCTACGGTTTTCGAATGTCCTTATGGTGTGAACATCTAAACTATGCAGATGACTCTTTC
GCGGATCCCTCGAGTCTAGAATGTGTTAGGAAAGTAAATGGCATGGCTGAAGAAAGCTGG
AAACTTTATTCAAGTGATACATTTGATCTAGATCTTCCAGGCCACCTTCTTCGCTACCCT
ATCGATATTTCGAACACAGGACAGATTACAACACTTCCTGGATTCAAGTTCTTCCCAGAC
ACAAAAGCTGCTATTCTTGGCAACAAATCTCAGTATCTCCCACCTATTCTCACTACATAA