Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020260
CDS Infomation

pacid=37448231 polypeptide=PGSC0003DMP400013803 locus=PGSC0003DMG400007833 ID=PGSC0003DMT400020260.v4.03 annot-version=v4.03
Sequence

ATGGCTACCAATTCATCAACCAACATTGTTGAGCTCAATGAAGTAATTGTAGCTGTAATT
CCATGGCCAGAACATGGTCATCTCAATCAACTCTTCCATATTGCTAACTTCATCTCTTCT
CACAATATCCCTCTTCACTTCATCTCACTCACTGATCGAAATCAAGATCTAAAAAATCGC
GTTCAAAATACCTCAAAAATCCATTTTAATGACCTTTTAGCACCCCCTCTGACCCAAATG
TCAGAACCCAGAGAGGATTTTGCTGATGAGTTTGCATTTTTGGAGTTTTTGGATAAATTG
GGGGAACCCATTTGCGAAATTTGTGTTGAAATCTCGAAGCAGGCGAAGAAATTGGTGGTT
GTTTTTGATTCTTTGATGACGGATGTGATTAAGGGAGTATATGCGATATCAAATGTTGAG
TGTTACTCTTTTCATGCGATTTCAGCTTTTTGTATGTATTCTACATTTCAACAGGTTGTT
GGTGAAGTTGAAGACGGAGTTGCACGCCAAGTGTTCGATGAAATGCCTGAAGTGGGGGAT
TGTTTTGGACCCGATATTTTTGAGTTTGTGCAAAAGGAAAGGGAATGTAATCTTAATTGT
GGAGAGTTTATGAATTCTTGTAGGGAATTAGAAGGGGAGTACTTGGATTTACTTGTCAAT
GTTAGGAAGAAGCCATTGTTTGCTCTTGGTCCATTTCATATGTTGCAAGAATTACCCGAG
TCATCGGGCAATAGGGATCGCCACGAGTGTCTTGAGTTTCTCGACGAGCAAGATTTTGAT
TCAGTAATGTTTGTTTCGTTTGGAACGACTACTACATTGTCGCGAGAGCAAGTGAATGAG
CTTGCGCTTGGTTTGGAAAGGAGCAACCATAAGTTCATTTGGGTGATAAGAGAAGCGGAT
AAAAAGATGGAGACGGAGAAATGTGGAGGGAAAGATTGGAACTTTGAATTGCCAGAAGGG
TTTGAAGAAAGAATGGAAGGAAGAGGAATGGTGGTGAGGAATTGGGTGCCTCAATTGGAA
ATCTTGGGACATAAATCTACGGGAGGGTTCTTGAGTCACTGTGGATGGAATTCTTGTATG
GAGAGCGTTAGCATGGGAGTTCCGATAGCAACTTGGCCAATTCAAGTGGACCAACCATAT
AACGCTGTTTTTGTAACCAACGTGCTGAAGATTGGAATCCCGGTTAGGAGTTGGGCTCGT
AGGGAAGAATTGGTAACAGCAACAACTATTGAGAAAGCTGTCAGGACTTTGATGGGTACA
CCGGAAGGAGAAGAAATTCGACAGAGGGCAATCGAGTTGAGCAATAAGATCAAGAACTCT
GTTAGCCATGGAGGACTTGCACAGAAGGAAAGGGAATCTTTCATTACTTGTATTACCAAA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400013803
PEP Infomation

pacid=37448231 transcript=PGSC0003DMT400020260 locus=PGSC0003DMG400007833 ID=PGSC0003DMT400020260.v4.03 annot-version=v4.03
Sequence

MATNSSTNIVELNEVIVAVIPWPEHGHLNQLFHIANFISSHNIPLHFISLTDRNQDLKNR
VQNTSKIHFNDLLAPPLTQMSEPREDFADEFAFLEFLDKLGEPICEICVEISKQAKKLVV
VFDSLMTDVIKGVYAISNVECYSFHAISAFCMYSTFQQVVGEVEDGVARQVFDEMPEVGD
CFGPDIFEFVQKERECNLNCGEFMNSCRELEGEYLDLLVNVRKKPLFALGPFHMLQELPE
SSGNRDRHECLEFLDEQDFDSVMFVSFGTTTTLSREQVNELALGLERSNHKFIWVIREAD
KKMETEKCGGKDWNFELPEGFEERMEGRGMVVRNWVPQLEILGHKSTGGFLSHCGWNSCM
ESVSMGVPIATWPIQVDQPYNAVFVTNVLKIGIPVRSWARREELVTATTIEKAVRTLMGT
PEGEEIRQRAIELSNKIKNSVSHGGLAQKERESFITCITK*

Transcript Sequence

Transcript ID

PGSC0003DMT400020260
Transcript Infomation

pacid=37448231 locus=PGSC0003DMG400007833 ID=PGSC0003DMT400020260.v4.03 annot-version=v4.03
Sequence

ATGGCTACCAATTCATCAACCAACATTGTTGAGCTCAATGAAGTAATTGTAGCTGTAATT
CCATGGCCAGAACATGGTCATCTCAATCAACTCTTCCATATTGCTAACTTCATCTCTTCT
CACAATATCCCTCTTCACTTCATCTCACTCACTGATCGAAATCAAGATCTAAAAAATCGC
GTTCAAAATACCTCAAAAATCCATTTTAATGACCTTTTAGCACCCCCTCTGACCCAAATG
TCAGAACCCAGAGAGGATTTTGCTGATGAGTTTGCATTTTTGGAGTTTTTGGATAAATTG
GGGGAACCCATTTGCGAAATTTGTGTTGAAATCTCGAAGCAGGCGAAGAAATTGGTGGTT
GTTTTTGATTCTTTGATGACGGATGTGATTAAGGGAGTATATGCGATATCAAATGTTGAG
TGTTACTCTTTTCATGCGATTTCAGCTTTTTGTATGTATTCTACATTTCAACAGGTTGTT
GGTGAAGTTGAAGACGGAGTTGCACGCCAAGTGTTCGATGAAATGCCTGAAGTGGGGGAT
TGTTTTGGACCCGATATTTTTGAGTTTGTGCAAAAGGAAAGGGAATGTAATCTTAATTGT
GGAGAGTTTATGAATTCTTGTAGGGAATTAGAAGGGGAGTACTTGGATTTACTTGTCAAT
GTTAGGAAGAAGCCATTGTTTGCTCTTGGTCCATTTCATATGTTGCAAGAATTACCCGAG
TCATCGGGCAATAGGGATCGCCACGAGTGTCTTGAGTTTCTCGACGAGCAAGATTTTGAT
TCAGTAATGTTTGTTTCGTTTGGAACGACTACTACATTGTCGCGAGAGCAAGTGAATGAG
CTTGCGCTTGGTTTGGAAAGGAGCAACCATAAGTTCATTTGGGTGATAAGAGAAGCGGAT
AAAAAGATGGAGACGGAGAAATGTGGAGGGAAAGATTGGAACTTTGAATTGCCAGAAGGG
TTTGAAGAAAGAATGGAAGGAAGAGGAATGGTGGTGAGGAATTGGGTGCCTCAATTGGAA
ATCTTGGGACATAAATCTACGGGAGGGTTCTTGAGTCACTGTGGATGGAATTCTTGTATG
GAGAGCGTTAGCATGGGAGTTCCGATAGCAACTTGGCCAATTCAAGTGGACCAACCATAT
AACGCTGTTTTTGTAACCAACGTGCTGAAGATTGGAATCCCGGTTAGGAGTTGGGCTCGT
AGGGAAGAATTGGTAACAGCAACAACTATTGAGAAAGCTGTCAGGACTTTGATGGGTACA
CCGGAAGGAGAAGAAATTCGACAGAGGGCAATCGAGTTGAGCAATAAGATCAAGAACTCT
GTTAGCCATGGAGGACTTGCACAGAAGGAAAGGGAATCTTTCATTACTTGTATTACCAAA
TAA