Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020228
CDS Infomation

pacid=37448673 polypeptide=PGSC0003DMP400013786 locus=PGSC0003DMG400007819 ID=PGSC0003DMT400020228.v4.03 annot-version=v4.03
Sequence

ATGTGTGTGCAAGATTCAGAGGAAGTGAGTGAGGATATGGAGAATTTGGACATTTCCAAG
ACTGATTGCAGTGAAAAGATCAGATCTTTACAAATAGAAAGTGAATTCCCAAATATCCAT
AAAGAGAAATTTGAAAAAAACTCATCTTCTAGCTATGCTGTGATGAGAAATTCATTCCCA
ATGGAAAGTATATCTGAGGATACGACTATTGCAGACCGTCAGCATATACTCTACAATAAA
TTCCTCCCAACTCTTAGGTCCGGAGAGTGGTCTGATATTGGAGGCCGTCATGATATGGAA
GATACTCACATCTGTATTGCAGACATGGCTAAGAACTTTGGTCATAGTATTAGTGGTGAG
GAAGCTATCTCCTTCTATGGAGTCTTTGATGGACATGGTGGAACGGGAGCAGCACTATTT
GTACGCGACTGCTTACCAAGAATCATCGTAGAGGATGCAGATTTCCCTTTGAAGCTCGAA
AAAGTGGTCAGTAAATCTTTTTTGGAGACCGATGCTGCTTTTGCCAATTCATGCTCCCTC
GATTCTGCCTTGTCCTCAGGCACAACTGCACTCACTGCTATGATATTTGGAAGATCATTA
CTCGTGGCAAATGCCGGTGACTGTCGAGCTGTTCTCTCTCGAGGTGGACTGGCTATAGAA
ATGTCAAAGGATCACAGACCTTGTTGTGTCAATGAAAGAACACGTGTTGAGTCCTTGGGT
GGATTTGTCGATGATGGCTATTTGAATGGACAGTTGGGTGTGACCCGAGCACTGGGTAAC
TGGCACATCAAGGGACTGAAGGAAGTTGATAAAGGTGGTCCATTGAGTGCTGAACCTGAA
CTAAAACTGCTTACGCTGACTAAGGAGGACGAGTTCCTGATCATCGGCAGTGATGGAATT
TGGGATGTTTTCAGAAACCAAAATGCAGTGGATTTTGCCCGGAGGAGACTGCAAGAGCAC
AACAATGTGAAATTATGCTGCAAGGAAATAGTAGACGAGGCCAAAAAACGCGGTGCCATA
GACAACTTAACAGTAGTCATGGTATGCTTTCATTCCGAGCCACCACCACCTATCGTATTC
CAAAGATCAAGAATCAGGAAGTGTATCTCTGCCGAGGGGCTTCAGAATCTGAAATCTTTA
CTCGAAGGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013786
PEP Infomation

pacid=37448673 transcript=PGSC0003DMT400020228 locus=PGSC0003DMG400007819 ID=PGSC0003DMT400020228.v4.03 annot-version=v4.03
Sequence

MCVQDSEEVSEDMENLDISKTDCSEKIRSLQIESEFPNIHKEKFEKNSSSSYAVMRNSFP
MESISEDTTIADRQHILYNKFLPTLRSGEWSDIGGRHDMEDTHICIADMAKNFGHSISGE
EAISFYGVFDGHGGTGAALFVRDCLPRIIVEDADFPLKLEKVVSKSFLETDAAFANSCSL
DSALSSGTTALTAMIFGRSLLVANAGDCRAVLSRGGLAIEMSKDHRPCCVNERTRVESLG
GFVDDGYLNGQLGVTRALGNWHIKGLKEVDKGGPLSAEPELKLLTLTKEDEFLIIGSDGI
WDVFRNQNAVDFARRRLQEHNNVKLCCKEIVDEAKKRGAIDNLTVVMVCFHSEPPPPIVF
QRSRIRKCISAEGLQNLKSLLEG*

Transcript Sequence

Transcript ID

PGSC0003DMT400020228
Transcript Infomation

pacid=37448673 locus=PGSC0003DMG400007819 ID=PGSC0003DMT400020228.v4.03 annot-version=v4.03
Sequence

ATGTGTGTGCAAGATTCAGAGGAAGTGAGTGAGGATATGGAGAATTTGGACATTTCCAAG
ACTGATTGCAGTGAAAAGATCAGATCTTTACAAATAGAAAGTGAATTCCCAAATATCCAT
AAAGAGAAATTTGAAAAAAACTCATCTTCTAGCTATGCTGTGATGAGAAATTCATTCCCA
ATGGAAAGTATATCTGAGGATACGACTATTGCAGACCGTCAGCATATACTCTACAATAAA
TTCCTCCCAACTCTTAGGTCCGGAGAGTGGTCTGATATTGGAGGCCGTCATGATATGGAA
GATACTCACATCTGTATTGCAGACATGGCTAAGAACTTTGGTCATAGTATTAGTGGTGAG
GAAGCTATCTCCTTCTATGGAGTCTTTGATGGACATGGTGGAACGGGAGCAGCACTATTT
GTACGCGACTGCTTACCAAGAATCATCGTAGAGGATGCAGATTTCCCTTTGAAGCTCGAA
AAAGTGGTCAGTAAATCTTTTTTGGAGACCGATGCTGCTTTTGCCAATTCATGCTCCCTC
GATTCTGCCTTGTCCTCAGGCACAACTGCACTCACTGCTATGATATTTGGAAGATCATTA
CTCGTGGCAAATGCCGGTGACTGTCGAGCTGTTCTCTCTCGAGGTGGACTGGCTATAGAA
ATGTCAAAGGATCACAGACCTTGTTGTGTCAATGAAAGAACACGTGTTGAGTCCTTGGGT
GGATTTGTCGATGATGGCTATTTGAATGGACAGTTGGGTGTGACCCGAGCACTGGGTAAC
TGGCACATCAAGGGACTGAAGGAAGTTGATAAAGGTGGTCCATTGAGTGCTGAACCTGAA
CTAAAACTGCTTACGCTGACTAAGGAGGACGAGTTCCTGATCATCGGCAGTGATGGAATT
TGGGATGTTTTCAGAAACCAAAATGCAGTGGATTTTGCCCGGAGGAGACTGCAAGAGCAC
AACAATGTGAAATTATGCTGCAAGGAAATAGTAGACGAGGCCAAAAAACGCGGTGCCATA
GACAACTTAACAGTAGTCATGGTATGCTTTCATTCCGAGCCACCACCACCTATCGTATTC
CAAAGATCAAGAATCAGGAAGTGTATCTCTGCCGAGGGGCTTCAGAATCTGAAATCTTTA
CTCGAAGGGTAG