Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020224
CDS Infomation

pacid=37447052 polypeptide=PGSC0003DMP400013782 locus=PGSC0003DMG400007817 ID=PGSC0003DMT400020224.v4.03 annot-version=v4.03
Sequence

ATGCATTTTCTGTGCTGTGTCACCGCCGTGGCTGACAAAAACACGGTGGTTGTACGTCAT
CATCCTCCCGGAAAACGTTCCTCCAAACTACATAATTATAACAATAGTGATAATTTGGAT
AATGGAATTTGTGGAATTTTATACAAATGGGCAAATTTTGGTAGAGGATGGAGGCCTCGT
TGGTTTGTTCTTCATGACGGTGTGCTTTTCTACTATAAAATCAATGGACAAGTTTTTAAT
TCCGAAACACAGAATGGCTTCACTGTTGTAGGGAAGAAATCATTTCGTTTCATCAACACA
TGTAAAACAACTCCATCTGACCAATTCCTCCCTCGAAAACCATTACGTGAAATACACCTT
AAGGACTCAACAGTAATGGGAAGTTGTTCAGACGATCGAAGGTTTTTGATAATTAATGGG
AAGAAGAAGCTGCAATTGAGGGCAGAGTCGAAGGACGATAGGTTAATATGGTTGGAAGGA
TTGTTTGGAGCAAAGAAGGCATTTATAACAAGTGATTTTGTTCATATGCCTAGAATGAAC
AACAATTGCAAGGTTGGAACTCGAGAGAGCGATATGAAAGGAGGAAACACAAGCAGATCG
AACGAAGAGCATTATAGGCAGGAGGAGATTGATGATGATGTTCACACTGATAACTTGTTT
TTTGATGCTCTAGATTGTCTTTCTACGTGTTCCTTGAGAACCGCCAATTGTTATGATGAA
AGCTCATCTTTTGATTCAGATAATGAGGAGGTTCATCCATCTGAAGATGGTCTTAGTTCT
TTTATGAGATTTGTCGAATGTGACTACCCTTACATAGAGCGAAGAGAGAAATTGCCTGAC
CCCGTTAACGAGGAGAAGGGCATAAGCCTTTGGTCAATGATCAAAGATAACATCGGGAAA
GATCTAACTAGAGTTTGTCTTCCTGTCTACTTCAATGAACCCCTCTCTTCTTTGCAGAAA
TGTTTCGAAGATTTTGAGTACTCTTACCTTCTTGATCAAGCATATGAATGGGGGAGAACG
GGAAATAGCCTTATGAGGATGCTTAATGTTGCAGCATTTGCTGTATCAGGATATGCTTGC
ACAGAAGATAGAAAGTTCAAGCCATTTAATCCATTATTGGGTGAGACATATGAAGCCAAT
TACCCAGACAAGGGACTACGTTTCATCTCGGAGAAGGTAAGTCATCATCCCTTGATTCTT
GCATGCTACTGTGAAGGCCGCGGTTGGAAAATGTGGGGAGATACCAATTTAAAAAGCAAA
TTTTGGGGTCCATCAATTCAACTTGATCCAGTTGGTGTCCTTAACTTAGAGTTCGATGAT
GGAGAAATGTTCCAATGGAGCAAGGTAACAACGTCCATCTACAACCTCGTTATAGGGAAA
GTCTATTGTGATCACTTTGGTACGATGCATATCCAAGGAAGTGGTGGCTACTCTTGCAAG
CTTAAATTTAAGAAGCAATCCATTATGAATAGAAATCCACACCAGGTACAAGGAGTTGTA
CAAGATAAGAGTGGAAAAACAGCAGCAACTGTGTTTGGGAAATGGGATGAAAGTTTGAGT
TACTCTAATTTATCGATGGATTTAGGACAAGATATGGCGTATTTGCTTTGGAAGCAAAGC
AAACCATCAAATTTTCAAACAAAGTACAGCTTTACACGTTTCGCAGTCACACTTAATGAG
CTCTCTCCTGATCTTGAGGAAAAGTTGCCTCCAACAGATTCAAGGCTTAGACCTGATCAA
AGATTTCTTGAAAATGGAGAATATGAAGTTGCTAACTCAGAGAAGTTACGCCTAGAGCAG
AGGCAACGTCAGGCATCACAGATGCAGGAAAAAGGGTGGAAACCAAGGTGGTTTAGAAAG
CCAAAAGGTAGTGATACATATCAGTATAGAGGAGGATATTGGGAAGCTAGAGAAACTGGT
AAATGGGAATCATGTCCACATATTTTTTCTGAAGAAACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013782
PEP Infomation

pacid=37447052 transcript=PGSC0003DMT400020224 locus=PGSC0003DMG400007817 ID=PGSC0003DMT400020224.v4.03 annot-version=v4.03
Sequence

MHFLCCVTAVADKNTVVVRHHPPGKRSSKLHNYNNSDNLDNGICGILYKWANFGRGWRPR
WFVLHDGVLFYYKINGQVFNSETQNGFTVVGKKSFRFINTCKTTPSDQFLPRKPLREIHL
KDSTVMGSCSDDRRFLIINGKKKLQLRAESKDDRLIWLEGLFGAKKAFITSDFVHMPRMN
NNCKVGTRESDMKGGNTSRSNEEHYRQEEIDDDVHTDNLFFDALDCLSTCSLRTANCYDE
SSSFDSDNEEVHPSEDGLSSFMRFVECDYPYIERREKLPDPVNEEKGISLWSMIKDNIGK
DLTRVCLPVYFNEPLSSLQKCFEDFEYSYLLDQAYEWGRTGNSLMRMLNVAAFAVSGYAC
TEDRKFKPFNPLLGETYEANYPDKGLRFISEKVSHHPLILACYCEGRGWKMWGDTNLKSK
FWGPSIQLDPVGVLNLEFDDGEMFQWSKVTTSIYNLVIGKVYCDHFGTMHIQGSGGYSCK
LKFKKQSIMNRNPHQVQGVVQDKSGKTAATVFGKWDESLSYSNLSMDLGQDMAYLLWKQS
KPSNFQTKYSFTRFAVTLNELSPDLEEKLPPTDSRLRPDQRFLENGEYEVANSEKLRLEQ
RQRQASQMQEKGWKPRWFRKPKGSDTYQYRGGYWEARETGKWESCPHIFSEET*

Transcript Sequence

Transcript ID

PGSC0003DMT400020224
Transcript Infomation

pacid=37447052 locus=PGSC0003DMG400007817 ID=PGSC0003DMT400020224.v4.03 annot-version=v4.03
Sequence

ATGCATTTTCTGTGCTGTGTCACCGCCGTGGCTGACAAAAACACGGTGGTTGTACGTCAT
CATCCTCCCGGAAAACGTTCCTCCAAACTACATAATTATAACAATAGTGATAATTTGGAT
AATGGAATTTGTGGAATTTTATACAAATGGGCAAATTTTGGTAGAGGATGGAGGCCTCGT
TGGTTTGTTCTTCATGACGGTGTGCTTTTCTACTATAAAATCAATGGACAAGTTTTTAAT
TCCGAAACACAGAATGGCTTCACTGTTGTAGGGAAGAAATCATTTCGTTTCATCAACACA
TGTAAAACAACTCCATCTGACCAATTCCTCCCTCGAAAACCATTACGTGAAATACACCTT
AAGGACTCAACAGTAATGGGAAGTTGTTCAGACGATCGAAGGTTTTTGATAATTAATGGG
AAGAAGAAGCTGCAATTGAGGGCAGAGTCGAAGGACGATAGGTTAATATGGTTGGAAGGA
TTGTTTGGAGCAAAGAAGGCATTTATAACAAGTGATTTTGTTCATATGCCTAGAATGAAC
AACAATTGCAAGGTTGGAACTCGAGAGAGCGATATGAAAGGAGGAAACACAAGCAGATCG
AACGAAGAGCATTATAGGCAGGAGGAGATTGATGATGATGTTCACACTGATAACTTGTTT
TTTGATGCTCTAGATTGTCTTTCTACGTGTTCCTTGAGAACCGCCAATTGTTATGATGAA
AGCTCATCTTTTGATTCAGATAATGAGGAGGTTCATCCATCTGAAGATGGTCTTAGTTCT
TTTATGAGATTTGTCGAATGTGACTACCCTTACATAGAGCGAAGAGAGAAATTGCCTGAC
CCCGTTAACGAGGAGAAGGGCATAAGCCTTTGGTCAATGATCAAAGATAACATCGGGAAA
GATCTAACTAGAGTTTGTCTTCCTGTCTACTTCAATGAACCCCTCTCTTCTTTGCAGAAA
TGTTTCGAAGATTTTGAGTACTCTTACCTTCTTGATCAAGCATATGAATGGGGGAGAACG
GGAAATAGCCTTATGAGGATGCTTAATGTTGCAGCATTTGCTGTATCAGGATATGCTTGC
ACAGAAGATAGAAAGTTCAAGCCATTTAATCCATTATTGGGTGAGACATATGAAGCCAAT
TACCCAGACAAGGGACTACGTTTCATCTCGGAGAAGGTAAGTCATCATCCCTTGATTCTT
GCATGCTACTGTGAAGGCCGCGGTTGGAAAATGTGGGGAGATACCAATTTAAAAAGCAAA
TTTTGGGGTCCATCAATTCAACTTGATCCAGTTGGTGTCCTTAACTTAGAGTTCGATGAT
GGAGAAATGTTCCAATGGAGCAAGGTAACAACGTCCATCTACAACCTCGTTATAGGGAAA
GTCTATTGTGATCACTTTGGTACGATGCATATCCAAGGAAGTGGTGGCTACTCTTGCAAG
CTTAAATTTAAGAAGCAATCCATTATGAATAGAAATCCACACCAGGTACAAGGAGTTGTA
CAAGATAAGAGTGGAAAAACAGCAGCAACTGTGTTTGGGAAATGGGATGAAAGTTTGAGT
TACTCTAATTTATCGATGGATTTAGGACAAGATATGGCGTATTTGCTTTGGAAGCAAAGC
AAACCATCAAATTTTCAAACAAAGTACAGCTTTACACGTTTCGCAGTCACACTTAATGAG
CTCTCTCCTGATCTTGAGGAAAAGTTGCCTCCAACAGATTCAAGGCTTAGACCTGATCAA
AGATTTCTTGAAAATGGAGAATATGAAGTTGCTAACTCAGAGAAGTTACGCCTAGAGCAG
AGGCAACGTCAGGCATCACAGATGCAGGAAAAAGGGTGGAAACCAAGGTGGTTTAGAAAG
CCAAAAGGTAGTGATACATATCAGTATAGAGGAGGATATTGGGAAGCTAGAGAAACTGGT
AAATGGGAATCATGTCCACATATTTTTTCTGAAGAAACTTAG