Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020210
CDS Infomation

pacid=37447662 polypeptide=PGSC0003DMP400013775 locus=PGSC0003DMG400007811 ID=PGSC0003DMT400020210.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAGGCTCAATGCAATCAAATCTTGAGTCTTTTTTGGATTGCACAACACCATTA
GTAGCATCCCAGTTCCTTGCCAAGAGTGAAATTAGAAACCTTAATAAGCTTTGGCATCCT
AAGGAAAGGGAGGAAATTGAATACTTCACATTGGCTGATCTTTGGAATTGTTTTGATGAA
TGGAGTGCTTATGGTGCTGGAGTTCCAATCAGATTAGATTCTGGTGAAACTTTAGTTCAA
TATTATGTGCCTTATCTTTCAGCAATTCAAATTTTCACCAGCAGTTCATCTGTAAGCATT
TTAAGGGAGGAGACTGAGTCTGCGTGGGAAATGAGGGATTCTTTCAGTGATTCATTCAGT
GAAGAGAGTGAGAGTGAAAAGCTTTCGAGATCGGATGGGGGTTCATCGGAGGAAGGTCTA
TTTGAGCAAGATAATCACTTGCAAATGAATAATAGATTGGGTTACCTTTATTATCAATAC
TTTGAGAGATCTTCTCCATATGGAAGAGTACCTCTGGTGGATAAGATTAGTAGCTTAGCT
GAAAGACACCCTGGATTAATGTCATTGAGAAGCGTAGATCTTTCACCAGCTAGTTGGATG
TCAGTTGCTTGGTATCCGATATATCACATTCCCATGGGAAGAACCATTAAAGACTTGTCG
ACATGCTTTCTCACATTCCACACCCTTTCTTCTTCTTTTCAAGATATGGACCTTGAAGAT
AACACAGAGAAAGGTATTAGGAAACGTAACGAAGGGGAAGCAATCCCACTTCCACCTTTC
GGTTTGGGAACTTACAAGATGCAGGGTAATGTTTGGATTTCAGACAGAAGTGGGAGGGAC
CAAGAGAGGATGGTGTCACTATTAAGCGTGGCCGATTCTTGGCTAAAGCAATTGGGGGTC
CAGCACCATGACTTTAACTACTTCTTGGGCATTCGTCATGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013775
PEP Infomation

pacid=37447662 transcript=PGSC0003DMT400020210 locus=PGSC0003DMG400007811 ID=PGSC0003DMT400020210.v4.03 annot-version=v4.03
Sequence

MEKGSMQSNLESFLDCTTPLVASQFLAKSEIRNLNKLWHPKEREEIEYFTLADLWNCFDE
WSAYGAGVPIRLDSGETLVQYYVPYLSAIQIFTSSSSVSILREETESAWEMRDSFSDSFS
EESESEKLSRSDGGSSEEGLFEQDNHLQMNNRLGYLYYQYFERSSPYGRVPLVDKISSLA
ERHPGLMSLRSVDLSPASWMSVAWYPIYHIPMGRTIKDLSTCFLTFHTLSSSFQDMDLED
NTEKGIRKRNEGEAIPLPPFGLGTYKMQGNVWISDRSGRDQERMVSLLSVADSWLKQLGV
QHHDFNYFLGIRHG*

Transcript Sequence

Transcript ID

PGSC0003DMT400020210
Transcript Infomation

pacid=37447662 locus=PGSC0003DMG400007811 ID=PGSC0003DMT400020210.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAGGCTCAATGCAATCAAATCTTGAGTCTTTTTTGGATTGCACAACACCATTA
GTAGCATCCCAGTTCCTTGCCAAGAGTGAAATTAGAAACCTTAATAAGCTTTGGCATCCT
AAGGAAAGGGAGGAAATTGAATACTTCACATTGGCTGATCTTTGGAATTGTTTTGATGAA
TGGAGTGCTTATGGTGCTGGAGTTCCAATCAGATTAGATTCTGGTGAAACTTTAGTTCAA
TATTATGTGCCTTATCTTTCAGCAATTCAAATTTTCACCAGCAGTTCATCTGTAAGCATT
TTAAGGGAGGAGACTGAGTCTGCGTGGGAAATGAGGGATTCTTTCAGTGATTCATTCAGT
GAAGAGAGTGAGAGTGAAAAGCTTTCGAGATCGGATGGGGGTTCATCGGAGGAAGGTCTA
TTTGAGCAAGATAATCACTTGCAAATGAATAATAGATTGGGTTACCTTTATTATCAATAC
TTTGAGAGATCTTCTCCATATGGAAGAGTACCTCTGGTGGATAAGATTAGTAGCTTAGCT
GAAAGACACCCTGGATTAATGTCATTGAGAAGCGTAGATCTTTCACCAGCTAGTTGGATG
TCAGTTGCTTGGTATCCGATATATCACATTCCCATGGGAAGAACCATTAAAGACTTGTCG
ACATGCTTTCTCACATTCCACACCCTTTCTTCTTCTTTTCAAGATATGGACCTTGAAGAT
AACACAGAGAAAGGTATTAGGAAACGTAACGAAGGGGAAGCAATCCCACTTCCACCTTTC
GGTTTGGGAACTTACAAGATGCAGGGTAATGTTTGGATTTCAGACAGAAGTGGGAGGGAC
CAAGAGAGGATGGTGTCACTATTAAGCGTGGCCGATTCTTGGCTAAAGCAATTGGGGGTC
CAGCACCATGACTTTAACTACTTCTTGGGCATTCGTCATGGCTAA