Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020044
CDS Infomation

pacid=37431222 polypeptide=PGSC0003DMP400013676 locus=PGSC0003DMG400007756 ID=PGSC0003DMT400020044.v4.03 annot-version=v4.03
Sequence

ATGGATCAACTAAAATTTGTGGTGGAAGCCTCTGAGGCTGAGTCCATTACCCACAAACTT
GGCCTACCTTCTGTCCACCACCTCCTCCCTGTCTTGGTTCAACCCGCACAGACCCTTGCC
CGCCCACCCATCTCCAACTACCACGTCGCCGCCGTTGGCCTCGGCTCCGACGGCCGTGTA
TTCCTCGGTGTTAACCTTGAATTTCCTGGCCTACCCCTTCATCACTCTGTTCACGCCGAG
CAGTTTCTCATCACTAACCTTGCTGTCCACCGCTGTCCCCGCCTCGTTGCATTCGCTGTC
TCTGCCGCCCCCTGTGGCCACTGCCGACAGTTTCTTCAAGAACTCCGAAACCCTTCCGAT
CTCCAAATCCACATCACATCTCAACACCAAAACAATCCCAATGTCACATTCGAACCTTTG
CGTGAAATTCTCCCAAACCCATTTGGTCCATTCGATCTCCTTGATGACGAAACTCCTTTA
CTCCTCGAGCGACATAACAACGGTTTAATCCTGTCGTATGAGATTAATCACGATGGAGAT
CTATGCAATGGGTTCTCAGATGACGATTTGAAATCGGGAAATCTGAGTAATGGGTTTTAT
AAATTGACAGAAACAGAGAGTACCCTTTTAAGGATTGCAGCTTTGGAAGGTGCTAACGAT
TCACACGCACCTTACAGTGGGTGTCCATCAGGGGTAGCAATTATGGATTATGAAGGGAAG
ATTTATAGAGGTTCTTATGTGGAATCTGCTGCTTATAATCCAAGTTTAGGGCCGGTGCAG
GCGGCATTGGTGGCTTTTGTGGCTGAAGGAGGTGGTGGGTATGAACGAATTGTGGCGGCG
GCTTTGGTGGAGAAGGAAGGCGCAAAGGTAAGGCAAGAGGACACTGCTAGGATCTTTCTG
AAATTGGTTTCTCCTAAATGTGACTTGAAGGTTTTCCACTGCTGTGTTGCTGAAAATGGT
TGTAAAAAGGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013676
PEP Infomation

pacid=37431222 transcript=PGSC0003DMT400020044 locus=PGSC0003DMG400007756 ID=PGSC0003DMT400020044.v4.03 annot-version=v4.03
Sequence

MDQLKFVVEASEAESITHKLGLPSVHHLLPVLVQPAQTLARPPISNYHVAAVGLGSDGRV
FLGVNLEFPGLPLHHSVHAEQFLITNLAVHRCPRLVAFAVSAAPCGHCRQFLQELRNPSD
LQIHITSQHQNNPNVTFEPLREILPNPFGPFDLLDDETPLLLERHNNGLILSYEINHDGD
LCNGFSDDDLKSGNLSNGFYKLTETESTLLRIAALEGANDSHAPYSGCPSGVAIMDYEGK
IYRGSYVESAAYNPSLGPVQAALVAFVAEGGGGYERIVAAALVEKEGAKVRQEDTARIFL
KLVSPKCDLKVFHCCVAENGCKKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400020044
Transcript Infomation

pacid=37431222 locus=PGSC0003DMG400007756 ID=PGSC0003DMT400020044.v4.03 annot-version=v4.03
Sequence

ATGGATCAACTAAAATTTGTGGTGGAAGCCTCTGAGGCTGAGTCCATTACCCACAAACTT
GGCCTACCTTCTGTCCACCACCTCCTCCCTGTCTTGGTTCAACCCGCACAGACCCTTGCC
CGCCCACCCATCTCCAACTACCACGTCGCCGCCGTTGGCCTCGGCTCCGACGGCCGTGTA
TTCCTCGGTGTTAACCTTGAATTTCCTGGCCTACCCCTTCATCACTCTGTTCACGCCGAG
CAGTTTCTCATCACTAACCTTGCTGTCCACCGCTGTCCCCGCCTCGTTGCATTCGCTGTC
TCTGCCGCCCCCTGTGGCCACTGCCGACAGTTTCTTCAAGAACTCCGAAACCCTTCCGAT
CTCCAAATCCACATCACATCTCAACACCAAAACAATCCCAATGTCACATTCGAACCTTTG
CGTGAAATTCTCCCAAACCCATTTGGTCCATTCGATCTCCTTGATGACGAAACTCCTTTA
CTCCTCGAGCGACATAACAACGGTTTAATCCTGTCGTATGAGATTAATCACGATGGAGAT
CTATGCAATGGGTTCTCAGATGACGATTTGAAATCGGGAAATCTGAGTAATGGGTTTTAT
AAATTGACAGAAACAGAGAGTACCCTTTTAAGGATTGCAGCTTTGGAAGGTGCTAACGAT
TCACACGCACCTTACAGTGGGTGTCCATCAGGGGTAGCAATTATGGATTATGAAGGGAAG
ATTTATAGAGGTTCTTATGTGGAATCTGCTGCTTATAATCCAAGTTTAGGGCCGGTGCAG
GCGGCATTGGTGGCTTTTGTGGCTGAAGGAGGTGGTGGGTATGAACGAATTGTGGCGGCG
GCTTTGGTGGAGAAGGAAGGCGCAAAGGTAAGGCAAGAGGACACTGCTAGGATCTTTCTG
AAATTGGTTTCTCCTAAATGTGACTTGAAGGTTTTCCACTGCTGTGTTGCTGAAAATGGT
TGTAAAAAGGATTGA