Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019870
CDS Infomation

pacid=37455990 polypeptide=PGSC0003DMP400013583 locus=PGSC0003DMG402007686 ID=PGSC0003DMT400019870.v4.03 annot-version=v4.03
Sequence

ATGGGAGAATCAGAGGCAAAATCAGAGACATCACTGAAAGATCAGGGAAATGAATTCTTC
AAAGCTGGGAACTATCTCAAAGCGGCAGCTTTGTACACTCAAGCCATCAAGAAAGACCCA
TCAAACGCTACTCTTTACAGCAATCGCGCTGCAGCATTTTTGCATCTGGTTAAACTTAGC
AAAGCAATTGCTGATGCCGAAATGACGATCAATCTGAAACCAGAGTGGGAAAAGGGTTAT
TTCAGGAAAGGATGCATACTAGAGGCTATGGAACGCTACGAGGATGCCTTAGCTGCTTTC
CAGATTGCATCAAAATACAATCCTCAAAGTTCGGAAGTATCCAAGAAGATAAAAATACTC
ACACAGTTGGCTAAAGATAAGAAGCGCACTGAAGAACTGGAGAACATGAGATCCAATGTT
GACATGGCAAAACATTTTGATGCATTGAAATCTGAACTGTCTGAAAAATATGGAGCTGAA
GATAGCTGGAAAGAGTTTTTCTCTTTCCATGTTGAAACAGTAGAGAATGCTGTTAAGTCA
TGGCATGAAACTTCAAAAGTGGACCCTAGAGTTTATTTCCTTCTGAACAAGGAGAAGACA
GACACAGAGAAGTACGCTCCAGCTGTTAATATAGACAAGGCTTTTGAGTCACCCCAAACG
CACAACAATTGTTTTTCATTTCTTCGACAGTATGCTGAAGATTCTTTTGCTCAAGCTGCG
TGTTTAGTGACACCAAAAAGTATCATATCTTATCCACAGGTTTGGAAAGGTCAAGGATCA
AGAAAATGGAAGCATGGACAAAATGATGGAATTTTCGTCCAATTTGAATCTCCTCTAGTG
CGGAGGTTGTGGTTTATCCCTAGCTCCACTGAGAAAGGCAAAACATTATGCAGGGATCCA
GTGCCTTTGGATATTAGTGCACATGAAATTCTTCCGCGTGTATTCAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013583
PEP Infomation

pacid=37455990 transcript=PGSC0003DMT400019870 locus=PGSC0003DMG402007686 ID=PGSC0003DMT400019870.v4.03 annot-version=v4.03
Sequence

MGESEAKSETSLKDQGNEFFKAGNYLKAAALYTQAIKKDPSNATLYSNRAAAFLHLVKLS
KAIADAEMTINLKPEWEKGYFRKGCILEAMERYEDALAAFQIASKYNPQSSEVSKKIKIL
TQLAKDKKRTEELENMRSNVDMAKHFDALKSELSEKYGAEDSWKEFFSFHVETVENAVKS
WHETSKVDPRVYFLLNKEKTDTEKYAPAVNIDKAFESPQTHNNCFSFLRQYAEDSFAQAA
CLVTPKSIISYPQVWKGQGSRKWKHGQNDGIFVQFESPLVRRLWFIPSSTEKGKTLCRDP
VPLDISAHEILPRVFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400019870
Transcript Infomation

pacid=37455990 locus=PGSC0003DMG402007686 ID=PGSC0003DMT400019870.v4.03 annot-version=v4.03
Sequence

ATGGGAGAATCAGAGGCAAAATCAGAGACATCACTGAAAGATCAGGGAAATGAATTCTTC
AAAGCTGGGAACTATCTCAAAGCGGCAGCTTTGTACACTCAAGCCATCAAGAAAGACCCA
TCAAACGCTACTCTTTACAGCAATCGCGCTGCAGCATTTTTGCATCTGGTTAAACTTAGC
AAAGCAATTGCTGATGCCGAAATGACGATCAATCTGAAACCAGAGTGGGAAAAGGGTTAT
TTCAGGAAAGGATGCATACTAGAGGCTATGGAACGCTACGAGGATGCCTTAGCTGCTTTC
CAGATTGCATCAAAATACAATCCTCAAAGTTCGGAAGTATCCAAGAAGATAAAAATACTC
ACACAGTTGGCTAAAGATAAGAAGCGCACTGAAGAACTGGAGAACATGAGATCCAATGTT
GACATGGCAAAACATTTTGATGCATTGAAATCTGAACTGTCTGAAAAATATGGAGCTGAA
GATAGCTGGAAAGAGTTTTTCTCTTTCCATGTTGAAACAGTAGAGAATGCTGTTAAGTCA
TGGCATGAAACTTCAAAAGTGGACCCTAGAGTTTATTTCCTTCTGAACAAGGAGAAGACA
GACACAGAGAAGTACGCTCCAGCTGTTAATATAGACAAGGCTTTTGAGTCACCCCAAACG
CACAACAATTGTTTTTCATTTCTTCGACAGTATGCTGAAGATTCTTTTGCTCAAGCTGCG
TGTTTAGTGACACCAAAAAGTATCATATCTTATCCACAGGTTTGGAAAGGTCAAGGATCA
AGAAAATGGAAGCATGGACAAAATGATGGAATTTTCGTCCAATTTGAATCTCCTCTAGTG
CGGAGGTTGTGGTTTATCCCTAGCTCCACTGAGAAAGGCAAAACATTATGCAGGGATCCA
GTGCCTTTGGATATTAGTGCACATGAAATTCTTCCGCGTGTATTCAAGTAA