Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019863
CDS Infomation

pacid=37455549 polypeptide=PGSC0003DMP400013578 locus=PGSC0003DMG400007683 ID=PGSC0003DMT400019863.v4.03 annot-version=v4.03
Sequence

ATGGGTATTAATGCTGATTTTGATGATCAATATTCTCATCATCATTATCAAAGGGTTGAA
ATTCCACCACCAAAGCCATTCTTGAAGACACTCAAATCTAATGTGAAAGAAACATTATTT
CCTGATGACCCTTTTAGAAAATTCAAGAATCAACCACTTTCCAAAAAAATTTCTTTGGGT
TTTCAATATTTTGTACCAATATTAGATTGGGCTCCTCGTTATACACTTCAATTATTTAAA
GCTGATATTATTGCTGGAATTACAATTGCTAGTCTTGCTGTTCCTCAAGGGATTAGTTAT
GCTGGCTTGGCTAACTTGCCTCCTGTTATTGGACTTTATTCAAGCTTTGTGCCACCATTG
ATATATGCTATGTTGGGAAGTTCAAAGCATTTGGCAATAGGGAATGTGGCAGTTCCATCA
CTTCTCATTTCTGCCATGCTTGGGAAAGTTGTTAATCCTCATGAAAATCCAAAGCTTTAT
CTTCAATTGGTGTTTACTGCTACTTTCTTTGCTGGAGTTTTCCAAGCTTCTTTAGGCTTC
TTAAGGCTAGGGTTTATAGTGGATTTTCTGTCTCACGCAACAATATTGGGATTCATGGGT
GGAGCAGCCACTGTTGTGTGCTTACAACAATTGAAAGGAATACTTGGCCTCGTTCATTTC
ACCCATCAAACTGATATTGTCAGTGTAATGACTTCTATCTTTACCCAAATCCACCAGTGG
AGGTGGGAAAGTGGAGTCCTAGGTTGCTGTTTCCTCTTCTTCCTCTTGCTGACCAGATAT
TTTAGCAAAATGAAGCCAAAATTCTTCTGGATAAGTGCTATGGCGCCTCTAACATCTGTA
ATTTTGGGAAGTGTTCTTGTTTATTTCACCCATGCTGAAAAAAATGGTGTTCAAGTGATT
GGGCATTTGAAAAAGGGGATAAATCCACCATCGTATTCTGAACTGGCGTTTAGCTCACAG
TATCTTGCAATTGCCATTAAGACTGGAGTTGTCACCAGTATCATATCCTTGGCTGAAGGA
ATAGCAGTTGGAAGGAGTTTTGCCATACTTGAAAACTATGATATTGATGGAAACAAAGAA
ATGATTGCTTTTGGGCTTATGAACATTGTTGGTTCTTGCACCTCTTGTTACTTAACCACA
GGACCATTTTCGCGAACCGCGGTAAATTACAATGCAGGATGTAAAACAACAGTGTCCAAC
ATAGTAATGTCAATAGCTGTGATGATAACATTGTTGTTACTCACACCATTATTCCATTAC
ACACCTCTTGTTGTTCTTTCCTCCATCATAATTTCAGCCATGCTTGGCATTATTGACTAC
AATGCTGCTATCCATTTATGGAAAGTTGATAAATACGATTTCCTCGTATGCATTAGCTCG
TATATTGGAGTCGTCTTTGGTAGCGTTGAAGTTGGCCTAATAGTCGCGGTGGCAATGTCA
TTACTTAGGATACTTTTATTTGTAGCAAGGCCTAAAACATTTGTTTTAGGTAAAATACCT
AATTCAATGACATATAGAAATATTGAACAATATTCAGCAGCAAGCAGTGTTCCAGGAGTT
CTCATCATCCACATTGATTCCCCAATTTATTTTGCTAATGCAAGTTATTTAAGGGAAAGG
ATATCAAGATGGATAGATGAAGAAGAAGAGAAGCAAAGGACATCAACAGAAATTGAGCTA
CAATATGTCATATTGGATATGAGTGCTGTTGGAAACATTGATACAAGTGGAATTAGTATG
CTTGAGGAAGTGAAAAGAAATGCAGATAGACGATGCCTTAAGGTTTTATTGGCAAATCCT
GGAGGGGAAGTGATGAAGAAGTTGGACAAGTCAAATTTCATAGACAAAATTGGGAAAGAA
TGGATTTATTTAACAATTGGTGAAGCAGTAAATGCATGCAATTATATTCTTCATAATTGC
AAGTTTCAATCAAAGAGAATTGATTCTTCAGTAACTCCAGATGATAATGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400013578
PEP Infomation

pacid=37455549 transcript=PGSC0003DMT400019863 locus=PGSC0003DMG400007683 ID=PGSC0003DMT400019863.v4.03 annot-version=v4.03
Sequence

MGINADFDDQYSHHHYQRVEIPPPKPFLKTLKSNVKETLFPDDPFRKFKNQPLSKKISLG
FQYFVPILDWAPRYTLQLFKADIIAGITIASLAVPQGISYAGLANLPPVIGLYSSFVPPL
IYAMLGSSKHLAIGNVAVPSLLISAMLGKVVNPHENPKLYLQLVFTATFFAGVFQASLGF
LRLGFIVDFLSHATILGFMGGAATVVCLQQLKGILGLVHFTHQTDIVSVMTSIFTQIHQW
RWESGVLGCCFLFFLLLTRYFSKMKPKFFWISAMAPLTSVILGSVLVYFTHAEKNGVQVI
GHLKKGINPPSYSELAFSSQYLAIAIKTGVVTSIISLAEGIAVGRSFAILENYDIDGNKE
MIAFGLMNIVGSCTSCYLTTGPFSRTAVNYNAGCKTTVSNIVMSIAVMITLLLLTPLFHY
TPLVVLSSIIISAMLGIIDYNAAIHLWKVDKYDFLVCISSYIGVVFGSVEVGLIVAVAMS
LLRILLFVARPKTFVLGKIPNSMTYRNIEQYSAASSVPGVLIIHIDSPIYFANASYLRER
ISRWIDEEEEKQRTSTEIELQYVILDMSAVGNIDTSGISMLEEVKRNADRRCLKVLLANP
GGEVMKKLDKSNFIDKIGKEWIYLTIGEAVNACNYILHNCKFQSKRIDSSVTPDDNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400019863
Transcript Infomation

pacid=37455549 locus=PGSC0003DMG400007683 ID=PGSC0003DMT400019863.v4.03 annot-version=v4.03
Sequence

ATGGGTATTAATGCTGATTTTGATGATCAATATTCTCATCATCATTATCAAAGGGTTGAA
ATTCCACCACCAAAGCCATTCTTGAAGACACTCAAATCTAATGTGAAAGAAACATTATTT
CCTGATGACCCTTTTAGAAAATTCAAGAATCAACCACTTTCCAAAAAAATTTCTTTGGGT
TTTCAATATTTTGTACCAATATTAGATTGGGCTCCTCGTTATACACTTCAATTATTTAAA
GCTGATATTATTGCTGGAATTACAATTGCTAGTCTTGCTGTTCCTCAAGGGATTAGTTAT
GCTGGCTTGGCTAACTTGCCTCCTGTTATTGGACTTTATTCAAGCTTTGTGCCACCATTG
ATATATGCTATGTTGGGAAGTTCAAAGCATTTGGCAATAGGGAATGTGGCAGTTCCATCA
CTTCTCATTTCTGCCATGCTTGGGAAAGTTGTTAATCCTCATGAAAATCCAAAGCTTTAT
CTTCAATTGGTGTTTACTGCTACTTTCTTTGCTGGAGTTTTCCAAGCTTCTTTAGGCTTC
TTAAGGCTAGGGTTTATAGTGGATTTTCTGTCTCACGCAACAATATTGGGATTCATGGGT
GGAGCAGCCACTGTTGTGTGCTTACAACAATTGAAAGGAATACTTGGCCTCGTTCATTTC
ACCCATCAAACTGATATTGTCAGTGTAATGACTTCTATCTTTACCCAAATCCACCAGTGG
AGGTGGGAAAGTGGAGTCCTAGGTTGCTGTTTCCTCTTCTTCCTCTTGCTGACCAGATAT
TTTAGCAAAATGAAGCCAAAATTCTTCTGGATAAGTGCTATGGCGCCTCTAACATCTGTA
ATTTTGGGAAGTGTTCTTGTTTATTTCACCCATGCTGAAAAAAATGGTGTTCAAGTGATT
GGGCATTTGAAAAAGGGGATAAATCCACCATCGTATTCTGAACTGGCGTTTAGCTCACAG
TATCTTGCAATTGCCATTAAGACTGGAGTTGTCACCAGTATCATATCCTTGGCTGAAGGA
ATAGCAGTTGGAAGGAGTTTTGCCATACTTGAAAACTATGATATTGATGGAAACAAAGAA
ATGATTGCTTTTGGGCTTATGAACATTGTTGGTTCTTGCACCTCTTGTTACTTAACCACA
GGACCATTTTCGCGAACCGCGGTAAATTACAATGCAGGATGTAAAACAACAGTGTCCAAC
ATAGTAATGTCAATAGCTGTGATGATAACATTGTTGTTACTCACACCATTATTCCATTAC
ACACCTCTTGTTGTTCTTTCCTCCATCATAATTTCAGCCATGCTTGGCATTATTGACTAC
AATGCTGCTATCCATTTATGGAAAGTTGATAAATACGATTTCCTCGTATGCATTAGCTCG
TATATTGGAGTCGTCTTTGGTAGCGTTGAAGTTGGCCTAATAGTCGCGGTGGCAATGTCA
TTACTTAGGATACTTTTATTTGTAGCAAGGCCTAAAACATTTGTTTTAGGTAAAATACCT
AATTCAATGACATATAGAAATATTGAACAATATTCAGCAGCAAGCAGTGTTCCAGGAGTT
CTCATCATCCACATTGATTCCCCAATTTATTTTGCTAATGCAAGTTATTTAAGGGAAAGG
ATATCAAGATGGATAGATGAAGAAGAAGAGAAGCAAAGGACATCAACAGAAATTGAGCTA
CAATATGTCATATTGGATATGAGTGCTGTTGGAAACATTGATACAAGTGGAATTAGTATG
CTTGAGGAAGTGAAAAGAAATGCAGATAGACGATGCCTTAAGGTTTTATTGGCAAATCCT
GGAGGGGAAGTGATGAAGAAGTTGGACAAGTCAAATTTCATAGACAAAATTGGGAAAGAA
TGGATTTATTTAACAATTGGTGAAGCAGTAAATGCATGCAATTATATTCTTCATAATTGC
AAGTTTCAATCAAAGAGAATTGATTCTTCAGTAACTCCAGATGATAATGTATAA