Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019824
CDS Infomation

pacid=37451999 polypeptide=PGSC0003DMP400013551 locus=PGSC0003DMG400007665 ID=PGSC0003DMT400019824.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAGCTTCTTACAATTGTATTTTCAATACAATATGTGTAATGGACGCTTCCACT
CGATTAGGCACAAAGCTAGTAAAACGTCTTCTCAAGAGAGGTTACACTGTTCATGCAGCT
ATTCAAAATCATGGCGAGTCGTCGTCGTTGAAGAGGATTGAATGTGAAGAGAAGAAATTG
AAGATATTTGAGTCGGACCCTTTTGATTATCATAGTATTCTTGATGCTTTGAAGGGTTGT
TCTGGTTTGTTCTACTCATTTGAACCTCCAGCAGATTATCCTACTTACGATGAAGAAATG
GGAGAAGTGGAGGTGAGGGCAGCACATAATGTATTGGAAGCATGCGCACAAACAGACACA
ATAGAAAAAGTTGTTTTTACTTCCTCAGCAACTACAATTATTTGGGGACATGATAAAGAT
TCTGCACCATCTATTGATGAAAGACATTGGACTGACATCAACTTTTGTCGTAAATTCAAG
TTGTGGCATGCTATGTCAAAAACACTAGCAGAGAAGACAGCTTGGGCATTGGCAATGGAT
AGAGGAATAAACATGGTGACTATTAACTCAGGACTGTTAATGGGTCCTGAATTAACCATT
ACTAATCCTTATCTCAAAGGGGCAGCTGAGATGTATGAAGATGGTGTGTTTGTGACTGTT
GATCTTGATTTCTTGGTGGATGCCCACATTTGTGTTTATGAAGATATAGCATCATATGGT
AGATATTTGTGCTTCAATCACATCATTAACCAAAAACAAGATGCTCTTAACCTTGTCCAA
ATGTTGTCCCCTTTGCCTTCTCCACCTCAAAGGTATACTAGTACACCTCATTTTTATTCA
TTTGGTTTATGGATAGAGTTTAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013551
PEP Infomation

pacid=37451999 transcript=PGSC0003DMT400019824 locus=PGSC0003DMG400007665 ID=PGSC0003DMT400019824.v4.03 annot-version=v4.03
Sequence

MAPASYNCIFNTICVMDASTRLGTKLVKRLLKRGYTVHAAIQNHGESSSLKRIECEEKKL
KIFESDPFDYHSILDALKGCSGLFYSFEPPADYPTYDEEMGEVEVRAAHNVLEACAQTDT
IEKVVFTSSATTIIWGHDKDSAPSIDERHWTDINFCRKFKLWHAMSKTLAEKTAWALAMD
RGINMVTINSGLLMGPELTITNPYLKGAAEMYEDGVFVTVDLDFLVDAHICVYEDIASYG
RYLCFNHIINQKQDALNLVQMLSPLPSPPQRYTSTPHFYSFGLWIEFN*

Transcript Sequence

Transcript ID

PGSC0003DMT400019824
Transcript Infomation

pacid=37451999 locus=PGSC0003DMG400007665 ID=PGSC0003DMT400019824.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAGCTTCTTACAATTGTATTTTCAATACAATATGTGTAATGGACGCTTCCACT
CGATTAGGCACAAAGCTAGTAAAACGTCTTCTCAAGAGAGGTTACACTGTTCATGCAGCT
ATTCAAAATCATGGCGAGTCGTCGTCGTTGAAGAGGATTGAATGTGAAGAGAAGAAATTG
AAGATATTTGAGTCGGACCCTTTTGATTATCATAGTATTCTTGATGCTTTGAAGGGTTGT
TCTGGTTTGTTCTACTCATTTGAACCTCCAGCAGATTATCCTACTTACGATGAAGAAATG
GGAGAAGTGGAGGTGAGGGCAGCACATAATGTATTGGAAGCATGCGCACAAACAGACACA
ATAGAAAAAGTTGTTTTTACTTCCTCAGCAACTACAATTATTTGGGGACATGATAAAGAT
TCTGCACCATCTATTGATGAAAGACATTGGACTGACATCAACTTTTGTCGTAAATTCAAG
TTGTGGCATGCTATGTCAAAAACACTAGCAGAGAAGACAGCTTGGGCATTGGCAATGGAT
AGAGGAATAAACATGGTGACTATTAACTCAGGACTGTTAATGGGTCCTGAATTAACCATT
ACTAATCCTTATCTCAAAGGGGCAGCTGAGATGTATGAAGATGGTGTGTTTGTGACTGTT
GATCTTGATTTCTTGGTGGATGCCCACATTTGTGTTTATGAAGATATAGCATCATATGGT
AGATATTTGTGCTTCAATCACATCATTAACCAAAAACAAGATGCTCTTAACCTTGTCCAA
ATGTTGTCCCCTTTGCCTTCTCCACCTCAAAGGTATACTAGTACACCTCATTTTTATTCA
TTTGGTTTATGGATAGAGTTTAACTAG