Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019813
CDS Infomation

pacid=37469737 polypeptide=PGSC0003DMP400013544 locus=PGSC0003DMG400007658 ID=PGSC0003DMT400019813.v4.03 annot-version=v4.03
Sequence

ATGAGTGCTGCAACATTCACTCATGTAGCATTTACCAATAATAATCCAATATGGATAAAA
CCCAATTCAATAAGAAGTTCTACTACAACAACAACAAACTGCAAATACTCCACCACTTCT
TTTGTTACAAGAGCAACTTCTTCTTCGAATCCGGAAACTGATAATGAGAAGAAAAATAAG
AGGAAGAAAAAGAAGGTAGTGAATGACAATAAGGAGCAAAAAGTACAGGAAACGGTGGAG
GAGAAGGAGCGGGAGCAGGTGCAAGAGTTACAATCTTCGTCAGTTTCTGTTATAAAGAGA
TTGGATGATGTAAATCCAGTGGGATTAGGAAGGCGTTCACGTCAAGTGTTTGATGAAGTG
TGGCGAAAGTTTTCAGGATTAGGGCAAATTTCGAGAACAATTCGTTCTGATGATGAGAGT
ACTTTGCTTATTAGAGAAGGTGGACCGATGTGTGAATTCGCTATTCCTGGTGCTCAGAAT
ACTACTGTGCTTGTTGTTGGTGCCACTAGTCGTGTTGGTAGAATTGTTGTGCGCAAACTC
ATGCTTAGGGGTTACACTGTCAAGGCTCTAGTAAGGAAAGCTGAACCGGAAGTGGTTGAC
ATGCTACCAAGGTCTGTGGAGCTAGTGACAGGCGATGTTGGTGATCCTTCCAGTCTTAAA
AATGCAGTGCAAGGTTGCAACAAAATCATCTATTGTGCCACTGCTCGGTCTTCAATCACT
GGGGATCTCATCAGAGTTGATCATCAAGGGGTTTACAATCTCACCAAAGCCTTGCAGGAC
TACAACAATAAACTAGCACAGCAACGAGCTGGAAAGAGTAGCAAAAGCAAGCTTTTAATT
GCAAAATTCAAGTCTGAAGATTCATTGAATGGGTGGGAAGTCCGTCAGGGGACATATTTC
CAGGATGTGGTTGTTTCTAAGTATGATGGAGGAATGGATGCCAAGTTTGAGTTTACTGAA
AGCGGAGAGGCTGTTTTTTCAGGGTATGTCTTCACAAGAGGAGGCTATGTTGACTTGTCA
CGAAAACTCTCACTCCCTTTGGGTTACACTCTTGACAGGTATGAGGGTCTAGTATTCTCT
GTTGGTGGAAATGGAAGATCTTATGTTGTAATTCTTGAAGCTGGTCCTTCAGCAGATACA
ACACAAAGCAAATTGTATTTTTCCAGAATTAGCACAAAAGCAGGATTTTGCAGGGTGAGA
GTTCCATTTTCTTCATTTCGGCCGGTGAAGCCAGATGATCCCCCATTGGATCCATTCCTT
GTGCATACCTTGACCATACGCTTTGAGCCTAGAAGACAGAGGCCAATTGAAGGACCTACG
GGGACGAACCAAGATCTGAGAAGCTTTCAGCTAATTATGGAATATATTAAGGCTTTGCCT
ACTGGACAAGAAACTGACTTTGTCTTGGTATCATGTACGGGGTCAGGAATAGAGCCTACC
AGACGGGAGCAAGTTTTGCGAGCCAAGAGGGCTGGTGAAGATTCATTAAGAAGGTCCGGC
CTTGGATACACAATTATTCGCCCAGGACCCTTGATGGAAGAACCAGGTGGGCAACGTGCG
CTCATATTTGATCAAGGAAATCGTATCTCTCAGGGAATCAGTTGTGCTGATGTGGCTGAC
ATTTGTGTGAAGGCATTGCATGATTCGACAGCCAGAAACAAGAGCTTTGATGTATGTTAT
GAATATGTCGCTGAGCCTGGGAAGGAGTTGTACGAGTTGGTTGCACATTTGCCTGACAAA
GCAAACAACTATTTGACACCAGCACTCTCTGTGCTGGAGAAAAACACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400013544
PEP Infomation

pacid=37469737 transcript=PGSC0003DMT400019813 locus=PGSC0003DMG400007658 ID=PGSC0003DMT400019813.v4.03 annot-version=v4.03
Sequence

MSAATFTHVAFTNNNPIWIKPNSIRSSTTTTTNCKYSTTSFVTRATSSSNPETDNEKKNK
RKKKKVVNDNKEQKVQETVEEKEREQVQELQSSSVSVIKRLDDVNPVGLGRRSRQVFDEV
WRKFSGLGQISRTIRSDDESTLLIREGGPMCEFAIPGAQNTTVLVVGATSRVGRIVVRKL
MLRGYTVKALVRKAEPEVVDMLPRSVELVTGDVGDPSSLKNAVQGCNKIIYCATARSSIT
GDLIRVDHQGVYNLTKALQDYNNKLAQQRAGKSSKSKLLIAKFKSEDSLNGWEVRQGTYF
QDVVVSKYDGGMDAKFEFTESGEAVFSGYVFTRGGYVDLSRKLSLPLGYTLDRYEGLVFS
VGGNGRSYVVILEAGPSADTTQSKLYFSRISTKAGFCRVRVPFSSFRPVKPDDPPLDPFL
VHTLTIRFEPRRQRPIEGPTGTNQDLRSFQLIMEYIKALPTGQETDFVLVSCTGSGIEPT
RREQVLRAKRAGEDSLRRSGLGYTIIRPGPLMEEPGGQRALIFDQGNRISQGISCADVAD
ICVKALHDSTARNKSFDVCYEYVAEPGKELYELVAHLPDKANNYLTPALSVLEKNT*

Transcript Sequence

Transcript ID

PGSC0003DMT400019813
Transcript Infomation

pacid=37469737 locus=PGSC0003DMG400007658 ID=PGSC0003DMT400019813.v4.03 annot-version=v4.03
Sequence

ATGAGTGCTGCAACATTCACTCATGTAGCATTTACCAATAATAATCCAATATGGATAAAA
CCCAATTCAATAAGAAGTTCTACTACAACAACAACAAACTGCAAATACTCCACCACTTCT
TTTGTTACAAGAGCAACTTCTTCTTCGAATCCGGAAACTGATAATGAGAAGAAAAATAAG
AGGAAGAAAAAGAAGGTAGTGAATGACAATAAGGAGCAAAAAGTACAGGAAACGGTGGAG
GAGAAGGAGCGGGAGCAGGTGCAAGAGTTACAATCTTCGTCAGTTTCTGTTATAAAGAGA
TTGGATGATGTAAATCCAGTGGGATTAGGAAGGCGTTCACGTCAAGTGTTTGATGAAGTG
TGGCGAAAGTTTTCAGGATTAGGGCAAATTTCGAGAACAATTCGTTCTGATGATGAGAGT
ACTTTGCTTATTAGAGAAGGTGGACCGATGTGTGAATTCGCTATTCCTGGTGCTCAGAAT
ACTACTGTGCTTGTTGTTGGTGCCACTAGTCGTGTTGGTAGAATTGTTGTGCGCAAACTC
ATGCTTAGGGGTTACACTGTCAAGGCTCTAGTAAGGAAAGCTGAACCGGAAGTGGTTGAC
ATGCTACCAAGGTCTGTGGAGCTAGTGACAGGCGATGTTGGTGATCCTTCCAGTCTTAAA
AATGCAGTGCAAGGTTGCAACAAAATCATCTATTGTGCCACTGCTCGGTCTTCAATCACT
GGGGATCTCATCAGAGTTGATCATCAAGGGGTTTACAATCTCACCAAAGCCTTGCAGGAC
TACAACAATAAACTAGCACAGCAACGAGCTGGAAAGAGTAGCAAAAGCAAGCTTTTAATT
GCAAAATTCAAGTCTGAAGATTCATTGAATGGGTGGGAAGTCCGTCAGGGGACATATTTC
CAGGATGTGGTTGTTTCTAAGTATGATGGAGGAATGGATGCCAAGTTTGAGTTTACTGAA
AGCGGAGAGGCTGTTTTTTCAGGGTATGTCTTCACAAGAGGAGGCTATGTTGACTTGTCA
CGAAAACTCTCACTCCCTTTGGGTTACACTCTTGACAGGTATGAGGGTCTAGTATTCTCT
GTTGGTGGAAATGGAAGATCTTATGTTGTAATTCTTGAAGCTGGTCCTTCAGCAGATACA
ACACAAAGCAAATTGTATTTTTCCAGAATTAGCACAAAAGCAGGATTTTGCAGGGTGAGA
GTTCCATTTTCTTCATTTCGGCCGGTGAAGCCAGATGATCCCCCATTGGATCCATTCCTT
GTGCATACCTTGACCATACGCTTTGAGCCTAGAAGACAGAGGCCAATTGAAGGACCTACG
GGGACGAACCAAGATCTGAGAAGCTTTCAGCTAATTATGGAATATATTAAGGCTTTGCCT
ACTGGACAAGAAACTGACTTTGTCTTGGTATCATGTACGGGGTCAGGAATAGAGCCTACC
AGACGGGAGCAAGTTTTGCGAGCCAAGAGGGCTGGTGAAGATTCATTAAGAAGGTCCGGC
CTTGGATACACAATTATTCGCCCAGGACCCTTGATGGAAGAACCAGGTGGGCAACGTGCG
CTCATATTTGATCAAGGAAATCGTATCTCTCAGGGAATCAGTTGTGCTGATGTGGCTGAC
ATTTGTGTGAAGGCATTGCATGATTCGACAGCCAGAAACAAGAGCTTTGATGTATGTTAT
GAATATGTCGCTGAGCCTGGGAAGGAGTTGTACGAGTTGGTTGCACATTTGCCTGACAAA
GCAAACAACTATTTGACACCAGCACTCTCTGTGCTGGAGAAAAACACATGA