Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019620
CDS Infomation

pacid=37431485 polypeptide=PGSC0003DMP400013421 locus=PGSC0003DMG400007582 ID=PGSC0003DMT400019620.v4.03 annot-version=v4.03
Sequence

ATGGTGGCAAATGCAATGATGCTGTTGGTGGCACTGGCAATAGTGTTGATCTTGTTGTTG
AAAGTGGTATACAAAATCATATGGGTCCCTTTAAAAGTGCAACATGTGTTGAAGAAACAA
GGCATAAATGGACCAGGTTACAGCCCAATTTTGAACAACACAGCAAAGATTAGAAGATTG
ATGATAGCAGAAGCTGAATCAAAGTCCAGCTGTTTCACTCATAATTATGAAACAGTGGTT
TCCCGTGTCATGCCACACTATTATAATTGGTCAACGATTTATGGAAAGAATTTTCTTTAC
TGGTTTGGTCCTAAACCTAGGGTTGCAATTGCTGATCCGAATCTCATAAAGGAGATATTG
CTTAATACTACTTCCTTTGAGAAAATCAAACATAACCCTTTGTCAAAACTTCTGCTTGGA
GATGGGCTTGTTGGGTTAGATGGTCACAAATGGGCTATTCACAGAAGGATCAGCAACCAC
GCCTTTAAAATGGAGATAGTAAAGGGTTGGATTTCTGAGATGGTTGATAGCACAACAAAG
TTGTTGGACAAGTGGGAAGACGTAACAAGTGCAAGAGACCAGTTTGAGATGGATGTACAC
AAAGAATTTCACAAACTTTCAGCAGACATCATTTCTAGGACCGCTTTTGGAAGTAGTTTT
GAGGAGGGAAAGCGTATTTTTGAATTACAAGACCAGCAAGTGAGCCTTGTTTTAGAGGCC
ATACGAAGTGTCTACATTCCTGGATTCAGATTTTTGCCCACCAAGAAGAACAGATTGAGG
AAAAGACTGGAGAAGGAAACTGGAGATGCAATTAGGATGTTGTTAAACAATTGCAGCAGA
ACAGCAAACAATTCGAAAAGCTTGCTTTCTTTGTTAATGCATCCAATCAAGAATCAGGAT
GACAAACAGGAGACACTGGATATAGAGGAGGTTGTAGATGAATGCAAGACATTCCACTTT
GCAGGAAAGGAGACAACTGCTAATTTTCTGACATGGGCTTTTCTTCTGTTGGCATTGCAT
CAAGAATGGCAGAGCAAGGCTCGGGAAGAAGTTGTTCGTGCTTGCAGAAATGGGATTCCT
ACTGCAGAGAATATAGCTGATCTCAAGATTGTGAGCATGATATTGAATGAAACACTTCGA
CTTTACCCGCCAGCTGTGATGTTGATGAGGCAAGCATCAAAGAATGTCAAGTTAGGAAAC
CTTGACATACCAGTGAATACACAGTTCTATTTGGCTATGAATGCTGTCCATCACGACAAG
GAGATCTGGGGAGATGATGCCCATGAATTCAACCCGTTGAGATTTGCTGAGTCACGGAAA
CATTTAGCTTCGTTTTTCCCATTTGGATTAGGCCCCAGAATCTGTGTGGGCCAAAACTTA
GCTCTTGTTGAGGCTAAAGTGGTCCTGTCAATGATCATTCAGCAATATTCTTTTTGCATT
TCCCCATCATACGTTCATGCTCCGACTCAGGCTATGACCTTACAACCTCAATATGGTGCT
CAAATACTCTTTAGCAAGATTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013421
PEP Infomation

pacid=37431485 transcript=PGSC0003DMT400019620 locus=PGSC0003DMG400007582 ID=PGSC0003DMT400019620.v4.03 annot-version=v4.03
Sequence

MVANAMMLLVALAIVLILLLKVVYKIIWVPLKVQHVLKKQGINGPGYSPILNNTAKIRRL
MIAEAESKSSCFTHNYETVVSRVMPHYYNWSTIYGKNFLYWFGPKPRVAIADPNLIKEIL
LNTTSFEKIKHNPLSKLLLGDGLVGLDGHKWAIHRRISNHAFKMEIVKGWISEMVDSTTK
LLDKWEDVTSARDQFEMDVHKEFHKLSADIISRTAFGSSFEEGKRIFELQDQQVSLVLEA
IRSVYIPGFRFLPTKKNRLRKRLEKETGDAIRMLLNNCSRTANNSKSLLSLLMHPIKNQD
DKQETLDIEEVVDECKTFHFAGKETTANFLTWAFLLLALHQEWQSKAREEVVRACRNGIP
TAENIADLKIVSMILNETLRLYPPAVMLMRQASKNVKLGNLDIPVNTQFYLAMNAVHHDK
EIWGDDAHEFNPLRFAESRKHLASFFPFGLGPRICVGQNLALVEAKVVLSMIIQQYSFCI
SPSYVHAPTQAMTLQPQYGAQILFSKIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400019620
Transcript Infomation

pacid=37431485 locus=PGSC0003DMG400007582 ID=PGSC0003DMT400019620.v4.03 annot-version=v4.03
Sequence

ATGGTGGCAAATGCAATGATGCTGTTGGTGGCACTGGCAATAGTGTTGATCTTGTTGTTG
AAAGTGGTATACAAAATCATATGGGTCCCTTTAAAAGTGCAACATGTGTTGAAGAAACAA
GGCATAAATGGACCAGGTTACAGCCCAATTTTGAACAACACAGCAAAGATTAGAAGATTG
ATGATAGCAGAAGCTGAATCAAAGTCCAGCTGTTTCACTCATAATTATGAAACAGTGGTT
TCCCGTGTCATGCCACACTATTATAATTGGTCAACGATTTATGGAAAGAATTTTCTTTAC
TGGTTTGGTCCTAAACCTAGGGTTGCAATTGCTGATCCGAATCTCATAAAGGAGATATTG
CTTAATACTACTTCCTTTGAGAAAATCAAACATAACCCTTTGTCAAAACTTCTGCTTGGA
GATGGGCTTGTTGGGTTAGATGGTCACAAATGGGCTATTCACAGAAGGATCAGCAACCAC
GCCTTTAAAATGGAGATAGTAAAGGGTTGGATTTCTGAGATGGTTGATAGCACAACAAAG
TTGTTGGACAAGTGGGAAGACGTAACAAGTGCAAGAGACCAGTTTGAGATGGATGTACAC
AAAGAATTTCACAAACTTTCAGCAGACATCATTTCTAGGACCGCTTTTGGAAGTAGTTTT
GAGGAGGGAAAGCGTATTTTTGAATTACAAGACCAGCAAGTGAGCCTTGTTTTAGAGGCC
ATACGAAGTGTCTACATTCCTGGATTCAGATTTTTGCCCACCAAGAAGAACAGATTGAGG
AAAAGACTGGAGAAGGAAACTGGAGATGCAATTAGGATGTTGTTAAACAATTGCAGCAGA
ACAGCAAACAATTCGAAAAGCTTGCTTTCTTTGTTAATGCATCCAATCAAGAATCAGGAT
GACAAACAGGAGACACTGGATATAGAGGAGGTTGTAGATGAATGCAAGACATTCCACTTT
GCAGGAAAGGAGACAACTGCTAATTTTCTGACATGGGCTTTTCTTCTGTTGGCATTGCAT
CAAGAATGGCAGAGCAAGGCTCGGGAAGAAGTTGTTCGTGCTTGCAGAAATGGGATTCCT
ACTGCAGAGAATATAGCTGATCTCAAGATTGTGAGCATGATATTGAATGAAACACTTCGA
CTTTACCCGCCAGCTGTGATGTTGATGAGGCAAGCATCAAAGAATGTCAAGTTAGGAAAC
CTTGACATACCAGTGAATACACAGTTCTATTTGGCTATGAATGCTGTCCATCACGACAAG
GAGATCTGGGGAGATGATGCCCATGAATTCAACCCGTTGAGATTTGCTGAGTCACGGAAA
CATTTAGCTTCGTTTTTCCCATTTGGATTAGGCCCCAGAATCTGTGTGGGCCAAAACTTA
GCTCTTGTTGAGGCTAAAGTGGTCCTGTCAATGATCATTCAGCAATATTCTTTTTGCATT
TCCCCATCATACGTTCATGCTCCGACTCAGGCTATGACCTTACAACCTCAATATGGTGCT
CAAATACTCTTTAGCAAGATTTCTTGA