Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019551
CDS Infomation

pacid=37459122 polypeptide=PGSC0003DMP400013373 locus=PGSC0003DMG400007560 ID=PGSC0003DMT400019551.v4.03 annot-version=v4.03
Sequence

ATGCCATCTCGTGAACTCCGTTCACTACCGCCGTCGCCGCTGTTGTCGCCGCCGCATGTT
CACCGTCAGAGCCACAATCTATTGCCACCTCTTGCCGGAGGAATAGCCGCTGCTGCATCT
CTCCTTATTCTCTTCACTTGCTGCTTCCGGAAAATCAGCCTGAAGCGAACCGTTCCCTCT
TCCGATTCAGAGTCAAAACCCCCTCACCGGTTCTCATACACCTCTCTCCGTCGCGCCACC
TCTCAATTCTCTCCATCGCTTCGTCTGGGTCAAGGTGGGTTTGGTTCTGTTTACAGAGGA
ACTGTCAAAAGCCCAACTACCAATTCCAATGTCTCAGTTGCTGTTAAAGTCATGGACGCT
GGGTCATTACAAGGTGAGCGTGAATTTCAAAACGAGCTCTTTTTCGCTGGGAAAATTGAT
TCTAAATACATTGTTTCCACTATCGGTTTCTCTTCCGATAAAAGAGGCCGTCGTATGGTA
CTAGTTTACGAGCTTTTGGCTAACGGAAGCTTACAAGACTGCCTTTTGCATCGCAAGTGT
AGTGAATTGAAGGATTGGAAAAAGAGATTGTCAATTGCTCTTGATATAGCTAAAGGGTTG
GAGTACTTGCACCATTTCTGTGACCCACCAGCGATTCACGGCGATATCAAGCCTAGTAAT
ATTCTATTGGATGATAATTTCAATGCGAAGATCGGCGATTTTGGATTGGCAAGGTTGAAA
GCGGAGGATCATATTGAAATTGAAGTGAGAAAGGAGAGTCCTGTAGGAAATGCGGCTGAG
GATAATGGGTCGGTGGCTGAGGAAACTGAGAGTGTGATTACTGTTAATTGTTTAGACGAG
TTTCACAGAGGAATTGAGCAGTCGCCGGAGAGTTTTGTTAGACTCGAGGCCTCGCCGGAG
ACGGTTACTGGGGTGGAATTGTCACCTGAGGCTCCTGTGGTGTCTCCAAGAACAGTGGCA
GCTATGGCATCCCCATCTGAGGGTCTAGAAAAAACGAGTCTTTCGGAGGGTAATTTTGAT
CGGTCCAGTATAGACAGTGGGATTGAAATTGGTAATAAGAAGAGTGGGGTGAAGAAGAAG
AAGAAGAGCATTACAGGGAAAGACTGGTGGTGGAAGCAAGATACTGGTGGGACGGATTCA
GGAGTGGTGAAGGATTATGTAATGGAATGGATTGGTAGTGAGATCAAGAAGGAGAGGCCG
AAGACAGAGTGGGTTGGGGCTTCGTCGAGTTCAGGACCAGTAGGAAAAATAGAAAAGAAG
AAACATAGGAAGCGATTAGATTGGTGGGTTTCATTAGATGATGAAAAAAATGGGAAGGAG
GAGAAGAGGAGGCCTGCAAGAGAGTGGTGGAAGGAGGAGTATTGTGAGGAGCTTGCTAGG
AAGAAAAAGAAAAAGAAGAAGGAACAGGGGGGGAAGGGTTCAATTAGTGATGATTGTCAT
AGTGAGTCTTGGTGGCCAAGGGATGATGAATTATATACTGCTAAAAAGAAGAAAAGGAGC
AGGAGTAGGGGTAGTAAAAGTAGCATGGATTGGTGGCTGGATGGATTTAGTAGTGAGCTT
CGGAGAGCTCGTAAGAATAGTTATGATTCTGCTAGTGGGGATATACCTAAAAGTGGTGGC
ATCAGTAGCACTCCAAGCATGAGAGGAACTGTATGTTATGTTGCACCAGAATATGGTAGC
TGTGGGGATCTATCTGAAAAGTGTGATGTATACAGCTATGGGGTGCTTTTGTTAGTTCTT
ATTGCTGGGCGTAGGCCACTTCAGGTGACGGGGTCACCCATGTCCGAATTCCAGCGTGCT
AATCTTCTCTCTTGGGCACGTCACCTTGCCCGAGCAGGGAAGCTTCTTGATTTGGTTGAT
CAAACTGTTGAATCATTAGACAAAGAACAAGCACTACTCTCCATCACTGTTGCCCTGCTC
TGCTTGCAGAAGTCACCTGCACGCCGACCATCAATGAAAGAAGTAGTTGGGATGCTCTCT
GGTGATTTAGAAGCTCCCCAGTTACCAGTCGAACTTTCACCCTCACCCCCCTCCCGCTTC
CCAATCAAGTCCCACAAGAAGGTCCGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013373
PEP Infomation

pacid=37459122 transcript=PGSC0003DMT400019551 locus=PGSC0003DMG400007560 ID=PGSC0003DMT400019551.v4.03 annot-version=v4.03
Sequence

MPSRELRSLPPSPLLSPPHVHRQSHNLLPPLAGGIAAAASLLILFTCCFRKISLKRTVPS
SDSESKPPHRFSYTSLRRATSQFSPSLRLGQGGFGSVYRGTVKSPTTNSNVSVAVKVMDA
GSLQGEREFQNELFFAGKIDSKYIVSTIGFSSDKRGRRMVLVYELLANGSLQDCLLHRKC
SELKDWKKRLSIALDIAKGLEYLHHFCDPPAIHGDIKPSNILLDDNFNAKIGDFGLARLK
AEDHIEIEVRKESPVGNAAEDNGSVAEETESVITVNCLDEFHRGIEQSPESFVRLEASPE
TVTGVELSPEAPVVSPRTVAAMASPSEGLEKTSLSEGNFDRSSIDSGIEIGNKKSGVKKK
KKSITGKDWWWKQDTGGTDSGVVKDYVMEWIGSEIKKERPKTEWVGASSSSGPVGKIEKK
KHRKRLDWWVSLDDEKNGKEEKRRPAREWWKEEYCEELARKKKKKKKEQGGKGSISDDCH
SESWWPRDDELYTAKKKKRSRSRGSKSSMDWWLDGFSSELRRARKNSYDSASGDIPKSGG
ISSTPSMRGTVCYVAPEYGSCGDLSEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRA
NLLSWARHLARAGKLLDLVDQTVESLDKEQALLSITVALLCLQKSPARRPSMKEVVGMLS
GDLEAPQLPVELSPSPPSRFPIKSHKKVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400019551
Transcript Infomation

pacid=37459122 locus=PGSC0003DMG400007560 ID=PGSC0003DMT400019551.v4.03 annot-version=v4.03
Sequence

ATGCCATCTCGTGAACTCCGTTCACTACCGCCGTCGCCGCTGTTGTCGCCGCCGCATGTT
CACCGTCAGAGCCACAATCTATTGCCACCTCTTGCCGGAGGAATAGCCGCTGCTGCATCT
CTCCTTATTCTCTTCACTTGCTGCTTCCGGAAAATCAGCCTGAAGCGAACCGTTCCCTCT
TCCGATTCAGAGTCAAAACCCCCTCACCGGTTCTCATACACCTCTCTCCGTCGCGCCACC
TCTCAATTCTCTCCATCGCTTCGTCTGGGTCAAGGTGGGTTTGGTTCTGTTTACAGAGGA
ACTGTCAAAAGCCCAACTACCAATTCCAATGTCTCAGTTGCTGTTAAAGTCATGGACGCT
GGGTCATTACAAGGTGAGCGTGAATTTCAAAACGAGCTCTTTTTCGCTGGGAAAATTGAT
TCTAAATACATTGTTTCCACTATCGGTTTCTCTTCCGATAAAAGAGGCCGTCGTATGGTA
CTAGTTTACGAGCTTTTGGCTAACGGAAGCTTACAAGACTGCCTTTTGCATCGCAAGTGT
AGTGAATTGAAGGATTGGAAAAAGAGATTGTCAATTGCTCTTGATATAGCTAAAGGGTTG
GAGTACTTGCACCATTTCTGTGACCCACCAGCGATTCACGGCGATATCAAGCCTAGTAAT
ATTCTATTGGATGATAATTTCAATGCGAAGATCGGCGATTTTGGATTGGCAAGGTTGAAA
GCGGAGGATCATATTGAAATTGAAGTGAGAAAGGAGAGTCCTGTAGGAAATGCGGCTGAG
GATAATGGGTCGGTGGCTGAGGAAACTGAGAGTGTGATTACTGTTAATTGTTTAGACGAG
TTTCACAGAGGAATTGAGCAGTCGCCGGAGAGTTTTGTTAGACTCGAGGCCTCGCCGGAG
ACGGTTACTGGGGTGGAATTGTCACCTGAGGCTCCTGTGGTGTCTCCAAGAACAGTGGCA
GCTATGGCATCCCCATCTGAGGGTCTAGAAAAAACGAGTCTTTCGGAGGGTAATTTTGAT
CGGTCCAGTATAGACAGTGGGATTGAAATTGGTAATAAGAAGAGTGGGGTGAAGAAGAAG
AAGAAGAGCATTACAGGGAAAGACTGGTGGTGGAAGCAAGATACTGGTGGGACGGATTCA
GGAGTGGTGAAGGATTATGTAATGGAATGGATTGGTAGTGAGATCAAGAAGGAGAGGCCG
AAGACAGAGTGGGTTGGGGCTTCGTCGAGTTCAGGACCAGTAGGAAAAATAGAAAAGAAG
AAACATAGGAAGCGATTAGATTGGTGGGTTTCATTAGATGATGAAAAAAATGGGAAGGAG
GAGAAGAGGAGGCCTGCAAGAGAGTGGTGGAAGGAGGAGTATTGTGAGGAGCTTGCTAGG
AAGAAAAAGAAAAAGAAGAAGGAACAGGGGGGGAAGGGTTCAATTAGTGATGATTGTCAT
AGTGAGTCTTGGTGGCCAAGGGATGATGAATTATATACTGCTAAAAAGAAGAAAAGGAGC
AGGAGTAGGGGTAGTAAAAGTAGCATGGATTGGTGGCTGGATGGATTTAGTAGTGAGCTT
CGGAGAGCTCGTAAGAATAGTTATGATTCTGCTAGTGGGGATATACCTAAAAGTGGTGGC
ATCAGTAGCACTCCAAGCATGAGAGGAACTGTATGTTATGTTGCACCAGAATATGGTAGC
TGTGGGGATCTATCTGAAAAGTGTGATGTATACAGCTATGGGGTGCTTTTGTTAGTTCTT
ATTGCTGGGCGTAGGCCACTTCAGGTGACGGGGTCACCCATGTCCGAATTCCAGCGTGCT
AATCTTCTCTCTTGGGCACGTCACCTTGCCCGAGCAGGGAAGCTTCTTGATTTGGTTGAT
CAAACTGTTGAATCATTAGACAAAGAACAAGCACTACTCTCCATCACTGTTGCCCTGCTC
TGCTTGCAGAAGTCACCTGCACGCCGACCATCAATGAAAGAAGTAGTTGGGATGCTCTCT
GGTGATTTAGAAGCTCCCCAGTTACCAGTCGAACTTTCACCCTCACCCCCCTCCCGCTTC
CCAATCAAGTCCCACAAGAAGGTCCGGTGA