Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019544
CDS Infomation

pacid=37437710 polypeptide=PGSC0003DMP400013369 locus=PGSC0003DMG400007556 ID=PGSC0003DMT400019544.v4.03 annot-version=v4.03
Sequence

ATGGTGGTGGAGAGAGATATCGACCATCTTCCAAAGAATGCGGCAAACTACACAGCTCTG
ACGCCGTTATCCTTCTTGGAAAGGGCGGCGATGATTTATCCCAACAGAAAATCATTAATT
CATGGGTCTGTTGAATACACATGGCTTCAGACTTATCGCCGTTGCTGTAAACTGGCTTCT
GCTCTTACCAAACGCTCCATCACTTTCGGAAGCACGGTTGCTGTGATTGCGCCAAATGTT
CCTGCTATGTATGAAGCTCATTTTGGAATTCCAATGGCTGGAGCTGTTTTAAATGCTGTC
AATGTTCGTTTAAATGCAGACACAATTGCTTTTCTTTTGGGACATTGCTCAGCTGCAGTT
GTCATGGTGGACCAAGAATTCTTTCCATTGGCTGAGGAAGCTTTAAAAATTTTAGAAGAT
AAGAGTGAAGGAAAATCAAATCGACCACTTATTGTAGTTATTGCTGATAAAAATTGTGAT
CCCGCCCCACTTCAATATGCTTTAGAGAAAGGGGCAGTTGAATATGATAATTTCTTGGAA
ACTGGTGACCCAAACTTTCCATGGAAGCCACCACAGGATGAGTGGCAGAGTATTGCTCTG
GGCTATACTTCTGGTACGACAGCTAGTCCTAAAGGAGTGGTGCTTCATCATCGTGGTGCG
TATCTTATGGCTTTAAGTAATGCCGTTGTTTGGAGTATGAAAGAGGGAGCTGTGTACCTT
TGGACTCTACCAATGTTTCACTGCAATGGTTGGTGTTTCACTTGGACACTTGCAGCAATT
TGTGGGACCAACATATGCCTTAGACAGGTAACTGCAAAGGCTGTTTATTCCGCCATAGCT
TACCTTGGTGTAACCCATTTCTCTGCTGCACCTGTGGTGCTCAATACCATAGTTAATGCT
TCAAAAGAGGAGACCATCCTTCCCCTGCCTCGCCTAGTACATGTAAGCACTGCTGGTGCT
TCTCCTCCTCCTCCTGTTCTTGCTGCAATGACTCAACGTGGCTTCCGTGTCTTACACACT
TATGGCCTTTCTGAAACCTATGGCCCCTCCACTATATGCACATGGAAGCCTGAGTGGGAT
TTACTTCCCATAGATGTTCAAGCACGTCTCAATGCACGTCAAGGTGTCAGATATGTAAGC
CTGGAGCATCTAGATGTAGTTAACCCCACGGACATGACACCTGTTCCAGCCGATGGGAAA
ACGATGGGAGAAATCGTCTTCAGGGGTAATGTTGTGATGAAAGGCTACCTGAAGAACCCG
AAAGCCAATGAAGCTGCTTTTGCAGGAGGCTGGTATCACTCTGGTGATCTTGCTGTAAAA
CATCCTGATGGATATATTGAAATAAAAGACAGATCAAAAGACATCATCATATCTGGTGGT
GAAAATATTAGTAGTGTTGAGGTCGAGAATATCCTATATCAACACCCAGCAATACTGGAG
GTCTCCGTTGTTGCAAGGCCTGATGAGCAATGGGGAGAGTCACCTTGTGCATTTGTGACA
TTAAAGCCTGCTGTAAAGGAAACAGATCAGCAACAGGTTGCAGAGGATATTATGAAATTT
AGTCGATCAAAGATGCCTAGGTACTGGGTACCAAAGTCAGTGTTTTTCGGACCATTGCCA
AAGACAGCTACAGGAAAAATACAGAAGCACTTGTTAAGGGCAAAGGCAAAGGAGATGGGA
CCATTGAAGAAGAGTAGATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013369
PEP Infomation

pacid=37437710 transcript=PGSC0003DMT400019544 locus=PGSC0003DMG400007556 ID=PGSC0003DMT400019544.v4.03 annot-version=v4.03
Sequence

MVVERDIDHLPKNAANYTALTPLSFLERAAMIYPNRKSLIHGSVEYTWLQTYRRCCKLAS
ALTKRSITFGSTVAVIAPNVPAMYEAHFGIPMAGAVLNAVNVRLNADTIAFLLGHCSAAV
VMVDQEFFPLAEEALKILEDKSEGKSNRPLIVVIADKNCDPAPLQYALEKGAVEYDNFLE
TGDPNFPWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNAVVWSMKEGAVYL
WTLPMFHCNGWCFTWTLAAICGTNICLRQVTAKAVYSAIAYLGVTHFSAAPVVLNTIVNA
SKEETILPLPRLVHVSTAGASPPPPVLAAMTQRGFRVLHTYGLSETYGPSTICTWKPEWD
LLPIDVQARLNARQGVRYVSLEHLDVVNPTDMTPVPADGKTMGEIVFRGNVVMKGYLKNP
KANEAAFAGGWYHSGDLAVKHPDGYIEIKDRSKDIIISGGENISSVEVENILYQHPAILE
VSVVARPDEQWGESPCAFVTLKPAVKETDQQQVAEDIMKFSRSKMPRYWVPKSVFFGPLP
KTATGKIQKHLLRAKAKEMGPLKKSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400019544
Transcript Infomation

pacid=37437710 locus=PGSC0003DMG400007556 ID=PGSC0003DMT400019544.v4.03 annot-version=v4.03
Sequence

ATGGTGGTGGAGAGAGATATCGACCATCTTCCAAAGAATGCGGCAAACTACACAGCTCTG
ACGCCGTTATCCTTCTTGGAAAGGGCGGCGATGATTTATCCCAACAGAAAATCATTAATT
CATGGGTCTGTTGAATACACATGGCTTCAGACTTATCGCCGTTGCTGTAAACTGGCTTCT
GCTCTTACCAAACGCTCCATCACTTTCGGAAGCACGGTTGCTGTGATTGCGCCAAATGTT
CCTGCTATGTATGAAGCTCATTTTGGAATTCCAATGGCTGGAGCTGTTTTAAATGCTGTC
AATGTTCGTTTAAATGCAGACACAATTGCTTTTCTTTTGGGACATTGCTCAGCTGCAGTT
GTCATGGTGGACCAAGAATTCTTTCCATTGGCTGAGGAAGCTTTAAAAATTTTAGAAGAT
AAGAGTGAAGGAAAATCAAATCGACCACTTATTGTAGTTATTGCTGATAAAAATTGTGAT
CCCGCCCCACTTCAATATGCTTTAGAGAAAGGGGCAGTTGAATATGATAATTTCTTGGAA
ACTGGTGACCCAAACTTTCCATGGAAGCCACCACAGGATGAGTGGCAGAGTATTGCTCTG
GGCTATACTTCTGGTACGACAGCTAGTCCTAAAGGAGTGGTGCTTCATCATCGTGGTGCG
TATCTTATGGCTTTAAGTAATGCCGTTGTTTGGAGTATGAAAGAGGGAGCTGTGTACCTT
TGGACTCTACCAATGTTTCACTGCAATGGTTGGTGTTTCACTTGGACACTTGCAGCAATT
TGTGGGACCAACATATGCCTTAGACAGGTAACTGCAAAGGCTGTTTATTCCGCCATAGCT
TACCTTGGTGTAACCCATTTCTCTGCTGCACCTGTGGTGCTCAATACCATAGTTAATGCT
TCAAAAGAGGAGACCATCCTTCCCCTGCCTCGCCTAGTACATGTAAGCACTGCTGGTGCT
TCTCCTCCTCCTCCTGTTCTTGCTGCAATGACTCAACGTGGCTTCCGTGTCTTACACACT
TATGGCCTTTCTGAAACCTATGGCCCCTCCACTATATGCACATGGAAGCCTGAGTGGGAT
TTACTTCCCATAGATGTTCAAGCACGTCTCAATGCACGTCAAGGTGTCAGATATGTAAGC
CTGGAGCATCTAGATGTAGTTAACCCCACGGACATGACACCTGTTCCAGCCGATGGGAAA
ACGATGGGAGAAATCGTCTTCAGGGGTAATGTTGTGATGAAAGGCTACCTGAAGAACCCG
AAAGCCAATGAAGCTGCTTTTGCAGGAGGCTGGTATCACTCTGGTGATCTTGCTGTAAAA
CATCCTGATGGATATATTGAAATAAAAGACAGATCAAAAGACATCATCATATCTGGTGGT
GAAAATATTAGTAGTGTTGAGGTCGAGAATATCCTATATCAACACCCAGCAATACTGGAG
GTCTCCGTTGTTGCAAGGCCTGATGAGCAATGGGGAGAGTCACCTTGTGCATTTGTGACA
TTAAAGCCTGCTGTAAAGGAAACAGATCAGCAACAGGTTGCAGAGGATATTATGAAATTT
AGTCGATCAAAGATGCCTAGGTACTGGGTACCAAAGTCAGTGTTTTTCGGACCATTGCCA
AAGACAGCTACAGGAAAAATACAGAAGCACTTGTTAAGGGCAAAGGCAAAGGAGATGGGA
CCATTGAAGAAGAGTAGATTGTAA