Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019522
CDS Infomation

pacid=37456276 polypeptide=PGSC0003DMP400013353 locus=PGSC0003DMG400007545 ID=PGSC0003DMT400019522.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCTCAATAACTCCATTCTCACATGTACACCCCATCAGCACAAAGGTACAACT
AATTTCAAACCCGCCGATTCATTTCTTCCTCCCTCTAATTTCCATACTAGAGTCAAGTCG
TCAACCAGAACACGCTCTTTGTCCTCTAAAACTAGCCAATCTTTCACATCTGTCGTTAAC
GAGTTCGAAAAAGAAAAGATCAACAAATCCATCGATCAATTAGAAGAAAGTGAAAACACT
ACGAAAATTTATGAACCGGAAGTAGTAGATCGATGGCTAGAAATTCATGGTCAAGATGAT
TGGGTAGGTATGCTTGATCCAATGGATCCAATTCTACGTAACGAATTAATTCGTTACGGA
GAAATGGCTCAAGCTTGTTACGATGCTTTCGATTTCGATCCATATTCTAAATATTGTGGG
AGTTGCAAATTTCCAAGGCGTAAGTTTTTTGATGGATTAGGGATGGCTGAATATGGGTAC
GATATCACACGTTATCTATATGCAACTTCAAATATTAACTTGCCAAATTTCTTCAAGCAA
TCGCGTTGGCCTAAGATATGGAGTAAAAACGCGAATTGGATTGGTTATGTTGCGGTTTCA
AATGACGAAACGACGAAACGGTTAGGGCGTCGTGACATAACAATTGCATGGAGAGGTACT
GTGACTCGTTTGGAATGGATTGCTGATTTAATGGATTATCTCCGTCCGATTTCTTCAGAT
AATATACCTTGCCCTGATCCTAATGTCAAGGTCGAGTCTGGATTTCTTGATCTTTACACT
GACAAAGACGAGAAGTGCAGGTATTGCAAGTTTTCAGCTCGAGAACAGATACTAACGGAA
GTGAAAAGATTAATAGAAATGTATCCAGACGAGGAAATGAGCATAACGGTTACCGGGCAC
AGCTTAGGCAGCGCGCTAGCGATATTAAGCGCGTACGACATAGTGGAAACGGGCTTAAAT
GTAAAGGCGGATACAAGTGCTGTGCCAATTTGTGTATTTTCGTTTTCAGGGCCAAGAGTT
GGTAATGTAAGGTTCAAAGAAAGAATTGAAAAATTAGGTGTGAAAGTGTTGAGAGTTGTG
AATGTTCATGATATTGTGCCAAAATCACCAGGATTAGTGTTGAATGAGCATTCACCATCT
ATGGTTATGAAGATATGTGAAAAGTTGCCATGGAGTTATTCACATGTTGGTGTGGAGTTG
GCTTTGGATCATAAGAATTCACCTTTTTTGAAACCAACTAGTGATCTTGTTTGTGCACAT
AATTTGGAGGCTCATTTGCACTTGCTTGACGGATATCATGGAAAAGGGAGAAGATTCGTG
CTTGAAAAGGGAAGAGACATAGCATTAGTGAACAAAGCATGTGACTTTTTGAAAGATCAT
TATTGTGTTCCTCCCAATTGGAGACAAGATGAAAACAAAGGCATGATTAGAGACAAAGAT
GGACGTTGGCTTCAACCTGAACGTCCTAGACTTGATGATCATCCTCATGATATTCACCAT
CATCCCAAACACTTAGGACTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013353
PEP Infomation

pacid=37456276 transcript=PGSC0003DMT400019522 locus=PGSC0003DMG400007545 ID=PGSC0003DMT400019522.v4.03 annot-version=v4.03
Sequence

MASLNNSILTCTPHQHKGTTNFKPADSFLPPSNFHTRVKSSTRTRSLSSKTSQSFTSVVN
EFEKEKINKSIDQLEESENTTKIYEPEVVDRWLEIHGQDDWVGMLDPMDPILRNELIRYG
EMAQACYDAFDFDPYSKYCGSCKFPRRKFFDGLGMAEYGYDITRYLYATSNINLPNFFKQ
SRWPKIWSKNANWIGYVAVSNDETTKRLGRRDITIAWRGTVTRLEWIADLMDYLRPISSD
NIPCPDPNVKVESGFLDLYTDKDEKCRYCKFSAREQILTEVKRLIEMYPDEEMSITVTGH
SLGSALAILSAYDIVETGLNVKADTSAVPICVFSFSGPRVGNVRFKERIEKLGVKVLRVV
NVHDIVPKSPGLVLNEHSPSMVMKICEKLPWSYSHVGVELALDHKNSPFLKPTSDLVCAH
NLEAHLHLLDGYHGKGRRFVLEKGRDIALVNKACDFLKDHYCVPPNWRQDENKGMIRDKD
GRWLQPERPRLDDHPHDIHHHPKHLGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400019522
Transcript Infomation

pacid=37456276 locus=PGSC0003DMG400007545 ID=PGSC0003DMT400019522.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCTCAATAACTCCATTCTCACATGTACACCCCATCAGCACAAAGGTACAACT
AATTTCAAACCCGCCGATTCATTTCTTCCTCCCTCTAATTTCCATACTAGAGTCAAGTCG
TCAACCAGAACACGCTCTTTGTCCTCTAAAACTAGCCAATCTTTCACATCTGTCGTTAAC
GAGTTCGAAAAAGAAAAGATCAACAAATCCATCGATCAATTAGAAGAAAGTGAAAACACT
ACGAAAATTTATGAACCGGAAGTAGTAGATCGATGGCTAGAAATTCATGGTCAAGATGAT
TGGGTAGGTATGCTTGATCCAATGGATCCAATTCTACGTAACGAATTAATTCGTTACGGA
GAAATGGCTCAAGCTTGTTACGATGCTTTCGATTTCGATCCATATTCTAAATATTGTGGG
AGTTGCAAATTTCCAAGGCGTAAGTTTTTTGATGGATTAGGGATGGCTGAATATGGGTAC
GATATCACACGTTATCTATATGCAACTTCAAATATTAACTTGCCAAATTTCTTCAAGCAA
TCGCGTTGGCCTAAGATATGGAGTAAAAACGCGAATTGGATTGGTTATGTTGCGGTTTCA
AATGACGAAACGACGAAACGGTTAGGGCGTCGTGACATAACAATTGCATGGAGAGGTACT
GTGACTCGTTTGGAATGGATTGCTGATTTAATGGATTATCTCCGTCCGATTTCTTCAGAT
AATATACCTTGCCCTGATCCTAATGTCAAGGTCGAGTCTGGATTTCTTGATCTTTACACT
GACAAAGACGAGAAGTGCAGGTATTGCAAGTTTTCAGCTCGAGAACAGATACTAACGGAA
GTGAAAAGATTAATAGAAATGTATCCAGACGAGGAAATGAGCATAACGGTTACCGGGCAC
AGCTTAGGCAGCGCGCTAGCGATATTAAGCGCGTACGACATAGTGGAAACGGGCTTAAAT
GTAAAGGCGGATACAAGTGCTGTGCCAATTTGTGTATTTTCGTTTTCAGGGCCAAGAGTT
GGTAATGTAAGGTTCAAAGAAAGAATTGAAAAATTAGGTGTGAAAGTGTTGAGAGTTGTG
AATGTTCATGATATTGTGCCAAAATCACCAGGATTAGTGTTGAATGAGCATTCACCATCT
ATGGTTATGAAGATATGTGAAAAGTTGCCATGGAGTTATTCACATGTTGGTGTGGAGTTG
GCTTTGGATCATAAGAATTCACCTTTTTTGAAACCAACTAGTGATCTTGTTTGTGCACAT
AATTTGGAGGCTCATTTGCACTTGCTTGACGGATATCATGGAAAAGGGAGAAGATTCGTG
CTTGAAAAGGGAAGAGACATAGCATTAGTGAACAAAGCATGTGACTTTTTGAAAGATCAT
TATTGTGTTCCTCCCAATTGGAGACAAGATGAAAACAAAGGCATGATTAGAGACAAAGAT
GGACGTTGGCTTCAACCTGAACGTCCTAGACTTGATGATCATCCTCATGATATTCACCAT
CATCCCAAACACTTAGGACTTTAA