Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019447
CDS Infomation

pacid=37441790 polypeptide=PGSC0003DMP400013311 locus=PGSC0003DMG400007517 ID=PGSC0003DMT400019447.v4.03 annot-version=v4.03
Sequence

ATGGAAACAAGAAGTGTTTTTGGTTTTGTGGTGTTGTTGAGTTTCTTGGTTTACTCTAAT
GCTATGCTTACTCCTGGTGGTGTTAATTATGAAGTGCAAGCTTTAATGGAGATCAAGAAC
TCATTACATGATCCACTTGGTGTTTTGAATTGGGATGAAAGTTCTGTTGATCCATGTAGC
TGGAATATGATCACTTGTTCAAATGATAAATTTGTCACTGGCTTGGCTTGTTCAAGCCAA
AGTTTGTCTGGGAAAATATCACCATACATCCATAACTTGACTCACTTGGATCTACTGCTT
CTGCAGAGCAATAATATAACAGGACCAATTCCAACTGAACTTGGAATGCTTCAGAAACTT
AATACAATTGATCTTTCTGATAATCAACTCACTGGGAAAATCCCTTCATCTTTAGCTCAA
TTAAAAAGCCTTCAATACTTGAGACTAAACAACAATAGTCTTAGTGGAGCTGTTCCTTTG
GAATTGTCTAATATGACTCAACTTACTCTTCTAGACTTGTCTTTTAATAATTTGAGTGGT
CCTGTGCCAAGGCTTCTAGCTAAAACATTCAACCTTTTGGGAAATCCTATTATATGTGCA
ACTGGAAAAGAACCAGAATGCAATGGAACAACAACATCCATGCCTTTGCCCTTCACTTTG
AACAACTCACAAAATGCTCAGCCTTTTGGAAGATCTAAAACTCACAAAATTGCCTTAGCC
TTTGGGACAAGTCTTGGATGTATCTGCCTACTAATTATTGGGTTTGGAATATTTCTATGG
TGGAGACAAAAGCACAACAAGCAAATTTTCTTTGACATCAATGAACAACATCATGAACAA
GTGTGTTTGGGAAACTTGAGGAGGTTCCAATTTAGGGAACTTCAAGTTGCCACAAACAAC
TTCAGCAACAAGAAGATACTGGGAAAAGGCGGTTTTGGAAACGTGTACAAAGGTTGTCTT
AGTGATGGCACGATTGTTGCTGTAAAAAGGCTCAAAGATGGAAATGCAATCGGAGGAGAC
AAACAATTCCAAACAGAAGTTGAAATGATCAGCTTGGCAGTGCATCGCAATCTCCTACGT
TTGTATGGGTTCTCCATGACACCAACTGAAAGGCTTCTGGTTTACCCTTACATGTCTAAT
GGAAGTGTTGCTTCTCGTCTCAAAGCCAAGCCACCATTGGACTGGACTACAAGAAAAAGA
ATTGCATTAGGAGCTGCAAGAGGTTTACTATATCTACATGAACAGTGTGATCCAAAGATT
ATCCACAGGGATGTGAAGGCAGCAAACATATTGCTCGACGATGACTGTGAGGCTGTTGTG
GGAGATTTTGGATTGGCAAAGCTATTGGATCATCGTGATTCACATGTCACAACTGCAGTT
AGGGGAACTGTAGGACATATAGCTCCTGAGTATCTCTCTACAGGACAGTCCTCTGATAAA
ACAGATGTTTTCGGGTTTGGAATTCTCCTGCTAGAGTTGATATCTGGCCAGAGAGCTCTA
GAATTTGGTAAAGCAGCAAATCAGAAAGGCATTATGCTTGATTGGGTAAAGAAGATTCAC
CTGGAGAAAAAGCTTGATTTGCTGGTGAGCAAGGACTTAAAGGACAAATATGATCGGATC
GAGCTTGAGGAAATGGTACAAGTAGCTCTAATATGCACTCAGTATCACCCTAGTCATAGA
CCAAAAATATCAGAAGTGGTAAGAATGCTCGAAGGAGACGGACTTGCAGAGAAATGGGAA
GCTTCTCAAAGAGCAGAATCTACGCGCTGCAGAGCCAATGAGTTCTCCTCTTCAGAAAGA
TATTCTGATCTTACTGATGATTCTTCATTGCTTGTTCAAGCAATGGAATTATCAGGACCA
AGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400013311
PEP Infomation

pacid=37441790 transcript=PGSC0003DMT400019447 locus=PGSC0003DMG400007517 ID=PGSC0003DMT400019447.v4.03 annot-version=v4.03
Sequence

METRSVFGFVVLLSFLVYSNAMLTPGGVNYEVQALMEIKNSLHDPLGVLNWDESSVDPCS
WNMITCSNDKFVTGLACSSQSLSGKISPYIHNLTHLDLLLLQSNNITGPIPTELGMLQKL
NTIDLSDNQLTGKIPSSLAQLKSLQYLRLNNNSLSGAVPLELSNMTQLTLLDLSFNNLSG
PVPRLLAKTFNLLGNPIICATGKEPECNGTTTSMPLPFTLNNSQNAQPFGRSKTHKIALA
FGTSLGCICLLIIGFGIFLWWRQKHNKQIFFDINEQHHEQVCLGNLRRFQFRELQVATNN
FSNKKILGKGGFGNVYKGCLSDGTIVAVKRLKDGNAIGGDKQFQTEVEMISLAVHRNLLR
LYGFSMTPTERLLVYPYMSNGSVASRLKAKPPLDWTTRKRIALGAARGLLYLHEQCDPKI
IHRDVKAANILLDDDCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSDK
TDVFGFGILLLELISGQRALEFGKAANQKGIMLDWVKKIHLEKKLDLLVSKDLKDKYDRI
ELEEMVQVALICTQYHPSHRPKISEVVRMLEGDGLAEKWEASQRAESTRCRANEFSSSER
YSDLTDDSSLLVQAMELSGPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400019447
Transcript Infomation

pacid=37441790 locus=PGSC0003DMG400007517 ID=PGSC0003DMT400019447.v4.03 annot-version=v4.03
Sequence

ATGGAAACAAGAAGTGTTTTTGGTTTTGTGGTGTTGTTGAGTTTCTTGGTTTACTCTAAT
GCTATGCTTACTCCTGGTGGTGTTAATTATGAAGTGCAAGCTTTAATGGAGATCAAGAAC
TCATTACATGATCCACTTGGTGTTTTGAATTGGGATGAAAGTTCTGTTGATCCATGTAGC
TGGAATATGATCACTTGTTCAAATGATAAATTTGTCACTGGCTTGGCTTGTTCAAGCCAA
AGTTTGTCTGGGAAAATATCACCATACATCCATAACTTGACTCACTTGGATCTACTGCTT
CTGCAGAGCAATAATATAACAGGACCAATTCCAACTGAACTTGGAATGCTTCAGAAACTT
AATACAATTGATCTTTCTGATAATCAACTCACTGGGAAAATCCCTTCATCTTTAGCTCAA
TTAAAAAGCCTTCAATACTTGAGACTAAACAACAATAGTCTTAGTGGAGCTGTTCCTTTG
GAATTGTCTAATATGACTCAACTTACTCTTCTAGACTTGTCTTTTAATAATTTGAGTGGT
CCTGTGCCAAGGCTTCTAGCTAAAACATTCAACCTTTTGGGAAATCCTATTATATGTGCA
ACTGGAAAAGAACCAGAATGCAATGGAACAACAACATCCATGCCTTTGCCCTTCACTTTG
AACAACTCACAAAATGCTCAGCCTTTTGGAAGATCTAAAACTCACAAAATTGCCTTAGCC
TTTGGGACAAGTCTTGGATGTATCTGCCTACTAATTATTGGGTTTGGAATATTTCTATGG
TGGAGACAAAAGCACAACAAGCAAATTTTCTTTGACATCAATGAACAACATCATGAACAA
GTGTGTTTGGGAAACTTGAGGAGGTTCCAATTTAGGGAACTTCAAGTTGCCACAAACAAC
TTCAGCAACAAGAAGATACTGGGAAAAGGCGGTTTTGGAAACGTGTACAAAGGTTGTCTT
AGTGATGGCACGATTGTTGCTGTAAAAAGGCTCAAAGATGGAAATGCAATCGGAGGAGAC
AAACAATTCCAAACAGAAGTTGAAATGATCAGCTTGGCAGTGCATCGCAATCTCCTACGT
TTGTATGGGTTCTCCATGACACCAACTGAAAGGCTTCTGGTTTACCCTTACATGTCTAAT
GGAAGTGTTGCTTCTCGTCTCAAAGCCAAGCCACCATTGGACTGGACTACAAGAAAAAGA
ATTGCATTAGGAGCTGCAAGAGGTTTACTATATCTACATGAACAGTGTGATCCAAAGATT
ATCCACAGGGATGTGAAGGCAGCAAACATATTGCTCGACGATGACTGTGAGGCTGTTGTG
GGAGATTTTGGATTGGCAAAGCTATTGGATCATCGTGATTCACATGTCACAACTGCAGTT
AGGGGAACTGTAGGACATATAGCTCCTGAGTATCTCTCTACAGGACAGTCCTCTGATAAA
ACAGATGTTTTCGGGTTTGGAATTCTCCTGCTAGAGTTGATATCTGGCCAGAGAGCTCTA
GAATTTGGTAAAGCAGCAAATCAGAAAGGCATTATGCTTGATTGGGTAAAGAAGATTCAC
CTGGAGAAAAAGCTTGATTTGCTGGTGAGCAAGGACTTAAAGGACAAATATGATCGGATC
GAGCTTGAGGAAATGGTACAAGTAGCTCTAATATGCACTCAGTATCACCCTAGTCATAGA
CCAAAAATATCAGAAGTGGTAAGAATGCTCGAAGGAGACGGACTTGCAGAGAAATGGGAA
GCTTCTCAAAGAGCAGAATCTACGCGCTGCAGAGCCAATGAGTTCTCCTCTTCAGAAAGA
TATTCTGATCTTACTGATGATTCTTCATTGCTTGTTCAAGCAATGGAATTATCAGGACCA
AGATAA