Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019387
CDS Infomation

pacid=37452398 polypeptide=PGSC0003DMP400013282 locus=PGSC0003DMG400007499 ID=PGSC0003DMT400019387.v4.03 annot-version=v4.03
Sequence

ATGAATCATGGAAAATCTGCGACCAAGGATTCCAAGTTACCAAAATGTCAAGTTTCAAAG
CCAAATTCTTGTTCGTTGCCTACAAACTCTAAGAGTAGCATACCAAGAGCAAGTCATTTT
AAGCATCAAGTAACTGATTCTGCTTTTGGTATTCAGAAAAATCTGGGATTAATGAGCTCC
TCTAGAAAGTTGAGAAATAGCAAAGAGAAAGCAAAAGCTGATGCTGCACCTTTAAAGGAT
AAATCTTCATCATGCATTTTGAGAGGAAATGATGAGAAATCACCATCAAAATTACAGACA
TCAATTGAATCTTCTCCAGTTAATAATTCTAGCAATATTGGCGTGGAGATGAATTCAGAT
GCCACACTTCCATCTACCCGAGCACATTCATCTGAAAGTCATGATGTATGTTTACCATCT
GTACTCCCTCTTCCTCACAGTACTCGTACTGCTGTTAGCAGTATGCCATACCTGCCCGCA
CAAGCCATGAAACCATCAGGTCTGCGGAGGCCCTCACCTTCCTTGGGATTTTTTCGTCAG
ACAAAAGCTTCAGATACACATCGCTTGTTGAAAGTCGAGTCTAGTATGTGCCCATTGCAA
AGGTCTGGTGATCTGAGGCCACCAGAGACACTAGCAAGGCAAGAAGGCAAGGACGACTTA
GCAAATTTAAACTGTAAGGTACTAGGATCTGAATCGGAAAGCTCAACATCATCCTACAAA
GTAATTAAAACAGGCTTGGAAGGAAACAGTGTAGAAAGAGTGAATATTCCAAGTAGTGTT
ATTAAGAAGCTTGATATAGTCAGTGATAATTTCAGAGATCATGTTGGTAATTTTGATGAG
CAAGTATTGGATCACATCAAGCACGAAGAAAAGAAGCCTCAGGATACAGAATTGCTGATG
AACGGCAAGCAACATCCACCACAAATGGGAAAACTTGAATATATAAACAAAGATGGTAAT
CTCATGAACTTCATCCCTGGTTTTATAGAAAATAAAGGCTCTGCTGGATCAGGTTTTAGA
GATTCTCAGTTTCCACAAGCTAGCTACAATTCAGAATCTCTAGTTCTACATAGACTGGAA
GATGGCAATCCAAATGAAAGAGAAGAATCTGCCATTTCTTCAGTAATTGATGGTTTGATT
TGTAACTCGCAGTATGGGAATATGATTAATTTAAGCGGGGAGGTGATGAAGGAAGGTTTC
ATGGGCGGCTGCAATAATTTAACTGGTGGAGAATTTGAAAAGGTCAAGTCCTTTGCAGTT
GAAGATGACGGGATCTTTGATAATGATAAGTACATTATGAAGATTAAGAGTAATTTGAGC
AAAGTCCAGAGAGAACTAAGGAATATTGGATGTGGGAACTGTGAACCCTTGAATCTCGCA
GGTTCAAACTTTAGTGAAGTAAAGATGGAACTGTCAGAAGTTGCATATCAGCATTCTCAT
AATCTGAAAGAAGCTTTTACCAGCAAGCAGATCACAGATAGAGCACAAACAGGAGGTTTA
GTAGCAGATATCTCAAGTGAAACTTTATCTGGTGAAAATTGCGAGACTAATCCTGGTGGG
CTTTCAATTAACTCAGAACATAAGTCCCAGGCTGGTAGCGTATTGCATTCAAGTGGTCAG
TCCCTTAGTAAACATGTTTGCATAGATCAAAACCAAGATGGACAGATTGATGAAACTGGT
TTATCCGCTCTTCCATATCGATCAGATGAAAGTGGTTTTGATAGGTTTGATGTAACAAGT
GCACAGACAGTGGTTGGAGAAGATCCTGCGGATATCATGTGTTCTAGCCCTGTCAAAATT
ACTCTTCCAGGAAATTGCAATCATTCAACAGATAAAGAATTCAATCATGATAAGATTCTT
GCAAATTCAACTACCTGTCGGGAATTTGGTTCATCGTCTAGTAGAACAAGAGATAAAATG
GTATCAGATGTACCTGGTTCGATTGGCGAATGTAGGAAACCAATTATAGAGTCTGTATTG
GAAGTGGTGAATGAAACTGAAATACACAATTCATTGAACTGTCACAATGAGGGCAATTTA
ACTTCCTCTATGGAATTTGGTTCATCTTCTGGGGGAACACAAAATGTAATTGGATCTGGT
ATACTTGGTCCAGTGGGTGAAGGTAACCAATTGATCAACAGTGTGCTCCTCTCCAAAGGA
ATGGATGAATTTGAAATTCAAGATTCATCAAACAAGCCTAATGATGGTAATCAGACCATC
ACATTGAAGCTTGGTATGCTGTCTCCGGAAAGCTTGAAAGTTGAAGAGTCACACATGTGC
AGCCATGCAGACTTCATCCCTTCCAGTCCAACAGAACTGGGGTGTCATACAGTTGTATTA
GAGAGTCTTCATACTCCTCCAAAACTCAGAGATGCAAGACAAGCAAATGAAGTTGGAAAG
ACAACAAATGCCCTCACAAATATTATACAGATAGAAGATGCACACGTGGAGACATATAAC
AATGATGCTCAGTTGTTGCCTAAAAAAGCCCCTATCACTGTGGTGGAAGAATGTGAAAGC
AGCAATTCCTTTGAGAATTTTCGAGAAGCTTTTCCATCACGAAAAAGTGTTGATGCAGGT
GGATTAGAAACCCCAAGTTTTCTGAACCAGGAGTCACCTCTGATTCATGGGAGTGATAAT
GATGCTGATGATCTGGATGCTATCCACTGTGTTGCGGGTAGACTATCATATCCGGCGGCA
ATTGAATCTTTATCTTTGGAATCTGATTTATCTGAGGGGACAAGTAAAAACCATACAGCA
AGTGTGCCAACTGATTGCATAGAACTTGTTGCAGGGGATCAGACCTCATCAAGAATCAGA
ATGAAGGTAGATGAAATGTTGAATGAAGATATTCTGGTGAAGGAATCTGAAACTGGTAAA
CTTAGTGGAAGTGAGAGTTCTCAAAATGAAATTTGCCACGGGCTGGAAGATACCGAGCAA
TGCACAAATGACGACACCATTTTTCCAGTCAAAAATGCTGAGAGCTGTCTGAAGAAAGGC
AATCTTTTGATATTACCACCACGGGATGCAGTTCCTTTTTCTGATGAATGGTTGGCAGCA
ATGGAAGCTGCAGGGGAGGAAATATTAACGATGAAAGGTGGTGCTGTACAAAACTCACCC
CAAGAGAAATCCTTGCCTGAGCCAAGCCCATGGTCTCCGGTGAAGAAGAAAAACAATCAA
CTTGGACCTTATGACTGTACAAAGTTCCACCACAATGGGCCTCGCGAGTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013282
PEP Infomation

pacid=37452398 transcript=PGSC0003DMT400019387 locus=PGSC0003DMG400007499 ID=PGSC0003DMT400019387.v4.03 annot-version=v4.03
Sequence

MNHGKSATKDSKLPKCQVSKPNSCSLPTNSKSSIPRASHFKHQVTDSAFGIQKNLGLMSS
SRKLRNSKEKAKADAAPLKDKSSSCILRGNDEKSPSKLQTSIESSPVNNSSNIGVEMNSD
ATLPSTRAHSSESHDVCLPSVLPLPHSTRTAVSSMPYLPAQAMKPSGLRRPSPSLGFFRQ
TKASDTHRLLKVESSMCPLQRSGDLRPPETLARQEGKDDLANLNCKVLGSESESSTSSYK
VIKTGLEGNSVERVNIPSSVIKKLDIVSDNFRDHVGNFDEQVLDHIKHEEKKPQDTELLM
NGKQHPPQMGKLEYINKDGNLMNFIPGFIENKGSAGSGFRDSQFPQASYNSESLVLHRLE
DGNPNEREESAISSVIDGLICNSQYGNMINLSGEVMKEGFMGGCNNLTGGEFEKVKSFAV
EDDGIFDNDKYIMKIKSNLSKVQRELRNIGCGNCEPLNLAGSNFSEVKMELSEVAYQHSH
NLKEAFTSKQITDRAQTGGLVADISSETLSGENCETNPGGLSINSEHKSQAGSVLHSSGQ
SLSKHVCIDQNQDGQIDETGLSALPYRSDESGFDRFDVTSAQTVVGEDPADIMCSSPVKI
TLPGNCNHSTDKEFNHDKILANSTTCREFGSSSSRTRDKMVSDVPGSIGECRKPIIESVL
EVVNETEIHNSLNCHNEGNLTSSMEFGSSSGGTQNVIGSGILGPVGEGNQLINSVLLSKG
MDEFEIQDSSNKPNDGNQTITLKLGMLSPESLKVEESHMCSHADFIPSSPTELGCHTVVL
ESLHTPPKLRDARQANEVGKTTNALTNIIQIEDAHVETYNNDAQLLPKKAPITVVEECES
SNSFENFREAFPSRKSVDAGGLETPSFLNQESPLIHGSDNDADDLDAIHCVAGRLSYPAA
IESLSLESDLSEGTSKNHTASVPTDCIELVAGDQTSSRIRMKVDEMLNEDILVKESETGK
LSGSESSQNEICHGLEDTEQCTNDDTIFPVKNAESCLKKGNLLILPPRDAVPFSDEWLAA
MEAAGEEILTMKGGAVQNSPQEKSLPEPSPWSPVKKKNNQLGPYDCTKFHHNGPRES*

Transcript Sequence

Transcript ID

PGSC0003DMT400019387
Transcript Infomation

pacid=37452398 locus=PGSC0003DMG400007499 ID=PGSC0003DMT400019387.v4.03 annot-version=v4.03
Sequence

ATGAATCATGGAAAATCTGCGACCAAGGATTCCAAGTTACCAAAATGTCAAGTTTCAAAG
CCAAATTCTTGTTCGTTGCCTACAAACTCTAAGAGTAGCATACCAAGAGCAAGTCATTTT
AAGCATCAAGTAACTGATTCTGCTTTTGGTATTCAGAAAAATCTGGGATTAATGAGCTCC
TCTAGAAAGTTGAGAAATAGCAAAGAGAAAGCAAAAGCTGATGCTGCACCTTTAAAGGAT
AAATCTTCATCATGCATTTTGAGAGGAAATGATGAGAAATCACCATCAAAATTACAGACA
TCAATTGAATCTTCTCCAGTTAATAATTCTAGCAATATTGGCGTGGAGATGAATTCAGAT
GCCACACTTCCATCTACCCGAGCACATTCATCTGAAAGTCATGATGTATGTTTACCATCT
GTACTCCCTCTTCCTCACAGTACTCGTACTGCTGTTAGCAGTATGCCATACCTGCCCGCA
CAAGCCATGAAACCATCAGGTCTGCGGAGGCCCTCACCTTCCTTGGGATTTTTTCGTCAG
ACAAAAGCTTCAGATACACATCGCTTGTTGAAAGTCGAGTCTAGTATGTGCCCATTGCAA
AGGTCTGGTGATCTGAGGCCACCAGAGACACTAGCAAGGCAAGAAGGCAAGGACGACTTA
GCAAATTTAAACTGTAAGGTACTAGGATCTGAATCGGAAAGCTCAACATCATCCTACAAA
GTAATTAAAACAGGCTTGGAAGGAAACAGTGTAGAAAGAGTGAATATTCCAAGTAGTGTT
ATTAAGAAGCTTGATATAGTCAGTGATAATTTCAGAGATCATGTTGGTAATTTTGATGAG
CAAGTATTGGATCACATCAAGCACGAAGAAAAGAAGCCTCAGGATACAGAATTGCTGATG
AACGGCAAGCAACATCCACCACAAATGGGAAAACTTGAATATATAAACAAAGATGGTAAT
CTCATGAACTTCATCCCTGGTTTTATAGAAAATAAAGGCTCTGCTGGATCAGGTTTTAGA
GATTCTCAGTTTCCACAAGCTAGCTACAATTCAGAATCTCTAGTTCTACATAGACTGGAA
GATGGCAATCCAAATGAAAGAGAAGAATCTGCCATTTCTTCAGTAATTGATGGTTTGATT
TGTAACTCGCAGTATGGGAATATGATTAATTTAAGCGGGGAGGTGATGAAGGAAGGTTTC
ATGGGCGGCTGCAATAATTTAACTGGTGGAGAATTTGAAAAGGTCAAGTCCTTTGCAGTT
GAAGATGACGGGATCTTTGATAATGATAAGTACATTATGAAGATTAAGAGTAATTTGAGC
AAAGTCCAGAGAGAACTAAGGAATATTGGATGTGGGAACTGTGAACCCTTGAATCTCGCA
GGTTCAAACTTTAGTGAAGTAAAGATGGAACTGTCAGAAGTTGCATATCAGCATTCTCAT
AATCTGAAAGAAGCTTTTACCAGCAAGCAGATCACAGATAGAGCACAAACAGGAGGTTTA
GTAGCAGATATCTCAAGTGAAACTTTATCTGGTGAAAATTGCGAGACTAATCCTGGTGGG
CTTTCAATTAACTCAGAACATAAGTCCCAGGCTGGTAGCGTATTGCATTCAAGTGGTCAG
TCCCTTAGTAAACATGTTTGCATAGATCAAAACCAAGATGGACAGATTGATGAAACTGGT
TTATCCGCTCTTCCATATCGATCAGATGAAAGTGGTTTTGATAGGTTTGATGTAACAAGT
GCACAGACAGTGGTTGGAGAAGATCCTGCGGATATCATGTGTTCTAGCCCTGTCAAAATT
ACTCTTCCAGGAAATTGCAATCATTCAACAGATAAAGAATTCAATCATGATAAGATTCTT
GCAAATTCAACTACCTGTCGGGAATTTGGTTCATCGTCTAGTAGAACAAGAGATAAAATG
GTATCAGATGTACCTGGTTCGATTGGCGAATGTAGGAAACCAATTATAGAGTCTGTATTG
GAAGTGGTGAATGAAACTGAAATACACAATTCATTGAACTGTCACAATGAGGGCAATTTA
ACTTCCTCTATGGAATTTGGTTCATCTTCTGGGGGAACACAAAATGTAATTGGATCTGGT
ATACTTGGTCCAGTGGGTGAAGGTAACCAATTGATCAACAGTGTGCTCCTCTCCAAAGGA
ATGGATGAATTTGAAATTCAAGATTCATCAAACAAGCCTAATGATGGTAATCAGACCATC
ACATTGAAGCTTGGTATGCTGTCTCCGGAAAGCTTGAAAGTTGAAGAGTCACACATGTGC
AGCCATGCAGACTTCATCCCTTCCAGTCCAACAGAACTGGGGTGTCATACAGTTGTATTA
GAGAGTCTTCATACTCCTCCAAAACTCAGAGATGCAAGACAAGCAAATGAAGTTGGAAAG
ACAACAAATGCCCTCACAAATATTATACAGATAGAAGATGCACACGTGGAGACATATAAC
AATGATGCTCAGTTGTTGCCTAAAAAAGCCCCTATCACTGTGGTGGAAGAATGTGAAAGC
AGCAATTCCTTTGAGAATTTTCGAGAAGCTTTTCCATCACGAAAAAGTGTTGATGCAGGT
GGATTAGAAACCCCAAGTTTTCTGAACCAGGAGTCACCTCTGATTCATGGGAGTGATAAT
GATGCTGATGATCTGGATGCTATCCACTGTGTTGCGGGTAGACTATCATATCCGGCGGCA
ATTGAATCTTTATCTTTGGAATCTGATTTATCTGAGGGGACAAGTAAAAACCATACAGCA
AGTGTGCCAACTGATTGCATAGAACTTGTTGCAGGGGATCAGACCTCATCAAGAATCAGA
ATGAAGGTAGATGAAATGTTGAATGAAGATATTCTGGTGAAGGAATCTGAAACTGGTAAA
CTTAGTGGAAGTGAGAGTTCTCAAAATGAAATTTGCCACGGGCTGGAAGATACCGAGCAA
TGCACAAATGACGACACCATTTTTCCAGTCAAAAATGCTGAGAGCTGTCTGAAGAAAGGC
AATCTTTTGATATTACCACCACGGGATGCAGTTCCTTTTTCTGATGAATGGTTGGCAGCA
ATGGAAGCTGCAGGGGAGGAAATATTAACGATGAAAGGTGGTGCTGTACAAAACTCACCC
CAAGAGAAATCCTTGCCTGAGCCAAGCCCATGGTCTCCGGTGAAGAAGAAAAACAATCAA
CTTGGACCTTATGACTGTACAAAGTTCCACCACAATGGGCCTCGCGAGTCCTGA