Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019338
CDS Infomation

pacid=37480173 polypeptide=PGSC0003DMP400013252 locus=PGSC0003DMG400007478 ID=PGSC0003DMT400019338.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGAGAATGAGTGGAAATGCAGTGAAGACGTTCGCCAGATCCATAACTTGCCTT
GCACGCATTGGCGCTGAGGTCGCCATTCAAGCCTCTTCTACCCAGCTCACATTTCACACT
CTCAACTCCTCAAGATCGGCCTATCAATCAATTACATTCAAACCTGATTTTTTTGATGTC
TTCACTGTTTCTGCTCCACAGGTGCAATGTAGTGTGCTCTTGAAGGCCATTTGTTCTGTA
TTAAGAACACCAATTGCCAGTATAGATCATTTGACTGTCTCATTGCCTAATCCTGATGCA
TCAAAGGTGCAGTGGACACTCAACTGCCATAATGGTATGAGGAAAGCTTATTGGATTACT
TGCAATGTTGAACCTGACATACAACACTTATCCCTTGATAGGAGAAAGCTTCCAAGCAAC
TTTGTGGTGAGGCCTCGTGATCTGAATAGGTTATTGTCCAACTTCCAAACAACTCTTCAG
GAGATCACAATCATTGCTACCAATCCGACTTGCTTACCTCCTGATACTGCAACTGAAATT
GGAGGGAAAGCTGTTGAGCTCAGAAGTTATATAGACCCAACCAAAGAAAATGATTCATCA
CTACACACTCAGTTGTGGATAGATCCCACTGAAGAGTTTGTGCAGTATAATCATAATGCA
AACCCTGTGGATGTGACATTTGGAGTGAAGGAATCAAAGGCTTTCCTTTCTTTCTGTGAG
GGATGTGAAGTTGACATACAGATCTATTTTGACAAAGCTGGCGAGCCAATTTTAATGGCT
CCAAAATTTGGTTTAGAGGATGGCTCCAACTCAACTTTTGATGCCACCTTGGTACTTGCA
ACCATGCTTATGTCACAGCTCAACACTGCAAGCTCCTCGGAAAATCCACAAGTTGCTGGC
ACTTCCTATGGGCAGGCTAATGATGGAAGACAGGCCCCAGTCCAGGAGAGGTCAAAAGGG
AATTCTGGGCTTCCATCTGATCAGACCAGGATTTGGTCTGATCTTTCAGGAAGCAGAACA
AAAGGTGGTAATGATGCTGAACACGGAAAGGAAAGAAATGAGAGCGATAATGTGCAAAGG
GAAATTCAGAAAATTGGTGCGATACACATATCTGAAGCTGGAGCTGCTGGAAGAAATATG
TCTGACATACCTAATGACTTCCGTTCTGTGGTCAGAAATCCTTTGGAAGAACCTCAAGGC
ATGGCAGATTTGGAAGGTCATGCTTCTCAACACCATCCTAGTAACTGGGTAGAAGCAGAT
GACGATGATGATGAAGGAGATGAGTCAGAGTTGTGTGTTCAATCAACTCCTCCATATCAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400013252
PEP Infomation

pacid=37480173 transcript=PGSC0003DMT400019338 locus=PGSC0003DMG400007478 ID=PGSC0003DMT400019338.v4.03 annot-version=v4.03
Sequence

MELRMSGNAVKTFARSITCLARIGAEVAIQASSTQLTFHTLNSSRSAYQSITFKPDFFDV
FTVSAPQVQCSVLLKAICSVLRTPIASIDHLTVSLPNPDASKVQWTLNCHNGMRKAYWIT
CNVEPDIQHLSLDRRKLPSNFVVRPRDLNRLLSNFQTTLQEITIIATNPTCLPPDTATEI
GGKAVELRSYIDPTKENDSSLHTQLWIDPTEEFVQYNHNANPVDVTFGVKESKAFLSFCE
GCEVDIQIYFDKAGEPILMAPKFGLEDGSNSTFDATLVLATMLMSQLNTASSSENPQVAG
TSYGQANDGRQAPVQERSKGNSGLPSDQTRIWSDLSGSRTKGGNDAEHGKERNESDNVQR
EIQKIGAIHISEAGAAGRNMSDIPNDFRSVVRNPLEEPQGMADLEGHASQHHPSNWVEAD
DDDDEGDESELCVQSTPPYH*

Transcript Sequence

Transcript ID

PGSC0003DMT400019338
Transcript Infomation

pacid=37480173 locus=PGSC0003DMG400007478 ID=PGSC0003DMT400019338.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGAGAATGAGTGGAAATGCAGTGAAGACGTTCGCCAGATCCATAACTTGCCTT
GCACGCATTGGCGCTGAGGTCGCCATTCAAGCCTCTTCTACCCAGCTCACATTTCACACT
CTCAACTCCTCAAGATCGGCCTATCAATCAATTACATTCAAACCTGATTTTTTTGATGTC
TTCACTGTTTCTGCTCCACAGGTGCAATGTAGTGTGCTCTTGAAGGCCATTTGTTCTGTA
TTAAGAACACCAATTGCCAGTATAGATCATTTGACTGTCTCATTGCCTAATCCTGATGCA
TCAAAGGTGCAGTGGACACTCAACTGCCATAATGGTATGAGGAAAGCTTATTGGATTACT
TGCAATGTTGAACCTGACATACAACACTTATCCCTTGATAGGAGAAAGCTTCCAAGCAAC
TTTGTGGTGAGGCCTCGTGATCTGAATAGGTTATTGTCCAACTTCCAAACAACTCTTCAG
GAGATCACAATCATTGCTACCAATCCGACTTGCTTACCTCCTGATACTGCAACTGAAATT
GGAGGGAAAGCTGTTGAGCTCAGAAGTTATATAGACCCAACCAAAGAAAATGATTCATCA
CTACACACTCAGTTGTGGATAGATCCCACTGAAGAGTTTGTGCAGTATAATCATAATGCA
AACCCTGTGGATGTGACATTTGGAGTGAAGGAATCAAAGGCTTTCCTTTCTTTCTGTGAG
GGATGTGAAGTTGACATACAGATCTATTTTGACAAAGCTGGCGAGCCAATTTTAATGGCT
CCAAAATTTGGTTTAGAGGATGGCTCCAACTCAACTTTTGATGCCACCTTGGTACTTGCA
ACCATGCTTATGTCACAGCTCAACACTGCAAGCTCCTCGGAAAATCCACAAGTTGCTGGC
ACTTCCTATGGGCAGGCTAATGATGGAAGACAGGCCCCAGTCCAGGAGAGGTCAAAAGGG
AATTCTGGGCTTCCATCTGATCAGACCAGGATTTGGTCTGATCTTTCAGGAAGCAGAACA
AAAGGTGGTAATGATGCTGAACACGGAAAGGAAAGAAATGAGAGCGATAATGTGCAAAGG
GAAATTCAGAAAATTGGTGCGATACACATATCTGAAGCTGGAGCTGCTGGAAGAAATATG
TCTGACATACCTAATGACTTCCGTTCTGTGGTCAGAAATCCTTTGGAAGAACCTCAAGGC
ATGGCAGATTTGGAAGGTCATGCTTCTCAACACCATCCTAGTAACTGGGTAGAAGCAGAT
GACGATGATGATGAAGGAGATGAGTCAGAGTTGTGTGTTCAATCAACTCCTCCATATCAT
TAG