Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019319
CDS Infomation

pacid=37471541 polypeptide=PGSC0003DMP400013237 locus=PGSC0003DMG400007465 ID=PGSC0003DMT400019319.v4.03 annot-version=v4.03
Sequence

ATGTTGCCTCATGATCAAGAGAATAGTAGTAACATCCATGGTGGTTCGAGTAATGTTCTT
GTACGTGCTCGAATTGATAGCATCTCACTTCAGATCGAACCAAATGGTCCAACGTGTAAC
GTTAGTCCTCGTGTGAACGATGATAGAGTCTCGGATCATCAACAATCACATCATGCTAAA
TTATCAATTCTTCGTGAATCTTTACACCCCGTTACTCTTAAGTTTGAAGATGTTTCATAC
ACTATCAAATTGGAAAGCAACAAAAGGGGTTATTTTTCTTCACATCAACAAAAGCAAACT
AGAATGATACTTCAAAATGTCATGGGAATAGTTAAGCCTGGTGAACTTTTGGCCATGTTA
GGTCCATCAGGAAGTGGTAAAACAACTCTCCTAACATCGATAGCCGGTCGATTGCACGGT
AAATTCTCCGGTACCATAACATACAACGATCAACAATTTTCGAGCTCAATGAAACGAAAA
ATTGGTTTCGTGACACAAGATGATGTGCTATATCCTCATTTAACCGTCCTCGAAACGTTG
ACATACGCTGCTTTGTTAAGATTACCTAGTAAATTAACAAATCAAGAGAAAATTGAGCAA
GCAGAGTTAGTTATTATGGAATTAGGGTTAACAAGATGTAGAAATAGTATGATTGGTGGA
CAATTATTTAGGGGAATTTCAGGTGGAGAGAGAAAAAGAGTGAGTATTGGACAAGAAATG
TTAGTGAATCCAAGTTTATTGTTACTTGATGAACCAACTTCAGGTCTTGATTCGACTACA
GCTCAACGTATCATGTCAACGTTACGTTGGTTGGCTAGAGGAGGTCGGACCGTGGTCACA
ACGATACATCAACCTTCTAGTACGTTGTTTAGAATGTTCGATAAAATTATCGTCTTGACC
GAAGGTTGTCCGATTTATTATGGGAAAAGTAGCCTTGTTATGGAATATTTTGCATCGATT
GGTTACGCTCCTGGATTCAATTTCATGAACCCTGCTGATTTTCTACTTGATCTTGCTAAT
GGTATTACACATGATACAAGGCATGATGATCAACATGAACTTATTATGAAACAAGATCAA
TCTGAAAATCAAAATGCAACCAAACAGTCCTTAATTTCCTCTTATAGAAAAAATATTTAT
CCTTTATTGAAAGAGGAAATTAATCAAAGTTGCAATCGTCCGATTCGTTCATCATCAACA
AGTCGCGACGATCAATGGACCACAAGTTGGTGGTTGCAATTTAAGGTTTTGCTTGGTAGA
GGACTTAAAGAAAGAAAACATGAAGCCTACTCTGGTCTAAGGATTTTCCAAGTGATGTCT
GTTTCATTTCTGTCTGGACTCCTATGGTGGCATTGTAAAACTAATCATATAATGGATCAG
GTAATGTTCAAAATTTCTCATGTAGCCATTCTAAGGTTGTTTTATTACGTTATGAATTGT
GTGATCGTCTCATCTGAAAGGTTAAACAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013237
PEP Infomation

pacid=37471541 transcript=PGSC0003DMT400019319 locus=PGSC0003DMG400007465 ID=PGSC0003DMT400019319.v4.03 annot-version=v4.03
Sequence

MLPHDQENSSNIHGGSSNVLVRARIDSISLQIEPNGPTCNVSPRVNDDRVSDHQQSHHAK
LSILRESLHPVTLKFEDVSYTIKLESNKRGYFSSHQQKQTRMILQNVMGIVKPGELLAML
GPSGSGKTTLLTSIAGRLHGKFSGTITYNDQQFSSSMKRKIGFVTQDDVLYPHLTVLETL
TYAALLRLPSKLTNQEKIEQAELVIMELGLTRCRNSMIGGQLFRGISGGERKRVSIGQEM
LVNPSLLLLDEPTSGLDSTTAQRIMSTLRWLARGGRTVVTTIHQPSSTLFRMFDKIIVLT
EGCPIYYGKSSLVMEYFASIGYAPGFNFMNPADFLLDLANGITHDTRHDDQHELIMKQDQ
SENQNATKQSLISSYRKNIYPLLKEEINQSCNRPIRSSSTSRDDQWTTSWWLQFKVLLGR
GLKERKHEAYSGLRIFQVMSVSFLSGLLWWHCKTNHIMDQVMFKISHVAILRLFYYVMNC
VIVSSERLNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400019319
Transcript Infomation

pacid=37471541 locus=PGSC0003DMG400007465 ID=PGSC0003DMT400019319.v4.03 annot-version=v4.03
Sequence

ATGTTGCCTCATGATCAAGAGAATAGTAGTAACATCCATGGTGGTTCGAGTAATGTTCTT
GTACGTGCTCGAATTGATAGCATCTCACTTCAGATCGAACCAAATGGTCCAACGTGTAAC
GTTAGTCCTCGTGTGAACGATGATAGAGTCTCGGATCATCAACAATCACATCATGCTAAA
TTATCAATTCTTCGTGAATCTTTACACCCCGTTACTCTTAAGTTTGAAGATGTTTCATAC
ACTATCAAATTGGAAAGCAACAAAAGGGGTTATTTTTCTTCACATCAACAAAAGCAAACT
AGAATGATACTTCAAAATGTCATGGGAATAGTTAAGCCTGGTGAACTTTTGGCCATGTTA
GGTCCATCAGGAAGTGGTAAAACAACTCTCCTAACATCGATAGCCGGTCGATTGCACGGT
AAATTCTCCGGTACCATAACATACAACGATCAACAATTTTCGAGCTCAATGAAACGAAAA
ATTGGTTTCGTGACACAAGATGATGTGCTATATCCTCATTTAACCGTCCTCGAAACGTTG
ACATACGCTGCTTTGTTAAGATTACCTAGTAAATTAACAAATCAAGAGAAAATTGAGCAA
GCAGAGTTAGTTATTATGGAATTAGGGTTAACAAGATGTAGAAATAGTATGATTGGTGGA
CAATTATTTAGGGGAATTTCAGGTGGAGAGAGAAAAAGAGTGAGTATTGGACAAGAAATG
TTAGTGAATCCAAGTTTATTGTTACTTGATGAACCAACTTCAGGTCTTGATTCGACTACA
GCTCAACGTATCATGTCAACGTTACGTTGGTTGGCTAGAGGAGGTCGGACCGTGGTCACA
ACGATACATCAACCTTCTAGTACGTTGTTTAGAATGTTCGATAAAATTATCGTCTTGACC
GAAGGTTGTCCGATTTATTATGGGAAAAGTAGCCTTGTTATGGAATATTTTGCATCGATT
GGTTACGCTCCTGGATTCAATTTCATGAACCCTGCTGATTTTCTACTTGATCTTGCTAAT
GGTATTACACATGATACAAGGCATGATGATCAACATGAACTTATTATGAAACAAGATCAA
TCTGAAAATCAAAATGCAACCAAACAGTCCTTAATTTCCTCTTATAGAAAAAATATTTAT
CCTTTATTGAAAGAGGAAATTAATCAAAGTTGCAATCGTCCGATTCGTTCATCATCAACA
AGTCGCGACGATCAATGGACCACAAGTTGGTGGTTGCAATTTAAGGTTTTGCTTGGTAGA
GGACTTAAAGAAAGAAAACATGAAGCCTACTCTGGTCTAAGGATTTTCCAAGTGATGTCT
GTTTCATTTCTGTCTGGACTCCTATGGTGGCATTGTAAAACTAATCATATAATGGATCAG
GTAATGTTCAAAATTTCTCATGTAGCCATTCTAAGGTTGTTTTATTACGTTATGAATTGT
GTGATCGTCTCATCTGAAAGGTTAAACAGTTAG