Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019301
CDS Infomation

pacid=37476049 polypeptide=PGSC0003DMP400013227 locus=PGSC0003DMG401007461 ID=PGSC0003DMT400019301.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGCAGTAATGACTTTGCTTGTGGAGAGCTTGTGTCAACTAATCACTGAAAAA
GTGAAGCTGATTGGAGGTGCAAAGGATGAGTTGGATAATCTGCTGCAAGTAATTAACACA
CTGAAAGCATTCCTTCAGGATAATGATCAACAAGAAAGCAACAGCAATTCGTGGAAAACA
TTTGTGAAGAATATCCGAACACAAGCGCATAAAGCTGATGACGTTATTGACAAATTTGTA
CTTGAGGCGAAGCTGCATGAAGAAAAAAATATATGGAAAAAAACTTTATCTTTCGGCAGG
CATATCAAAAGAGTTAATAATCTTGCAAAAGGTATCAAAGATATCTGTGAGAAGGTGAAG
GTGATTCGCCAAGAAAATCCACAAGTTCTCCAGCCCAGACCAATGCTAAATCTACCCAGA
AGACTTGCAAGGGAGCCTCAGGCTACATTCTTGGAGGTTAGAAATATCGTTGGGTTCACT
ACAGAATCAAATGAAGTGATGGAGCGGCTTGTTGGAGGAACAGAGGAGGTAGAATGCATA
CCTATTGTGGGTATGACTGGACTTGGCAAAACCACACTGGCAAGAAAAGTATGGAGTGAT
TCTCAGATTACAGCTATATTTTCCAAGATCATTTGGGTTTCTGTCGGACAGTCCAACGAA
CTAGAGGATATCTTTTTTGTGATTCTCAAATCATCTACGGGACCCAATCAAGAATTTCGC
TTGACTGGTGAGAATGAACTAGCTAAAGTAATAGCTAGTTTTGGGACTGAACAACACAGG
TGTCTCATTGTGTTGGATGATGTGTGGGCGAGTGAACTTGTAGATTTTTTCAAAAATGTT
CTTCCAGAAAACAAGAAAAGACATAGGATCTTGATGACCACTCGCCGCAGAGATTTGGCT
AGCTGTGCAAGTGAAAGACCTTATCATCTCAAGTTTCTCACTGGAGAAGACAGTTTTCGG
TTGCTGGAAAAGAGAGTTTTCGACAATGGAAGGTGTCAAAATGATTTAGTAGAGCTTGGA
AAGAGTATTGCAAATAAATGTGGTGGATTACCACTTGCATTAGTGGTAATTGCTAGAGCT
TTAAAAGTTATTCAGAATGTATATGAATGGAAAAGGATTGAGAACAACTTTTGGCAGTAT
GTTGTGAGAGAGAATGACACAACAAGCTGCTGGAAAATTGTGGAAGCCAGTTATGAAAGT
TTGTCCTCTGAAATGAAAACGTGCTTCTTGTATTGCCTAGCCTTTCCTAAAGGCTACGAT
ATTCCTGTTCAGATGTTGATTCGCTTGTGGATGGCGGAGGGGCTAATAGAGTCGAGTCCA
ATAAATTTCTCTTCCTCTGAGGACAAAGCAGATAATTATTTGATGGAGTTTGAGAATTTG
GACCTTGTGATAGTGTCGAGAGAGATTACTGGTTCGATAAAAAGGGTTAAATGTAATGAG
ATGTTCTATGAGTTCTACAAGATGGAGGTGACTAAAGAAAGTGTTTTTCAAGAACTACGT
CTCACACCTGATTTTCCATCGATAAATGATCCAGATACTTCTCGTCGATTGCATATTGAA
TCATGTGATCTGCCAGATTTTATCTCCAGAATTTCCAGTGCAGAACATGTTAGATCTTTC
TTATGTTTTTCCTCGGAAGATCTAGACCAACAAACCAACTTATCCTCTCATGTTGACATT
CAACTCATCCGGAAAGCATTTCCACTTCTCAGGGTTTTGAAAATTGAATCAATCAACATT
CCCTCCTTGAAGAATCTTAACCTACTATTTCATCTGAGGTACATTTCTATCTCAGGTAAT
TTCAAGGAACTTCCTGCATTCTTTAGTAAGTTTTGGAGTTTACAATCTATTATAGTTAAT
ACATCCCAGCCCACTCTCAACATAAAAGCAAATATATGGAACATGCCAAAGTTGACGCAT
TTGAAGACCAACAAACCTTCTAAATTGCCTCTCCCTTCAACCCAAAAGGGAAAAGGTTCC
TCCTCCCTGCTGCAAACTCTTTCTAAGATTTCACCAGAAACTTGCAACAAAGCTGTGCTC
GGACAGGCTTCGAACAGCCTCAAAAAATTGAGTATTCAAGGGAAAATAGAAGATTCTCTT
CAAACTAACAGTGACCGATTCAGCACTTTTGAAGGGTTTCAAACTTTAGAAAAGTTTGAG
TGCCTAGAAAATTTGAAACTGGTAAGTGATGTTCCTTGCCATACTAATGATTTTCAGTTT
CCGAAAGCATTATTCAGATTTCTACTCAAGCTTAAGAAGTTAACTTTGTCAAAGACAATG
TTTGATTGGAAAGATGCAACTAAACTAGGGCAACTGGAATGCCTGGAGGTCCTCAAGTTG
AAAACTGATGCATTCACAGGGAAGTCATGGAATCCGGAGAAAGGTGATTTTCGAAAACTG
CAGGTCTTGTGGATTCATAGCAATGACCTCCATACTTGGGAGGCTTCAGGATCTCACTTC
CCCAAACTTAGGGTACTTGTTCTTGAGTGTCCTAAGCTTGAGAGTGTGCCAGCTGAACTA
TCTCAGTTTCAGCAGCAGAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013227
PEP Infomation

pacid=37476049 transcript=PGSC0003DMT400019301 locus=PGSC0003DMG401007461 ID=PGSC0003DMT400019301.v4.03 annot-version=v4.03
Sequence

MADAVMTLLVESLCQLITEKVKLIGGAKDELDNLLQVINTLKAFLQDNDQQESNSNSWKT
FVKNIRTQAHKADDVIDKFVLEAKLHEEKNIWKKTLSFGRHIKRVNNLAKGIKDICEKVK
VIRQENPQVLQPRPMLNLPRRLAREPQATFLEVRNIVGFTTESNEVMERLVGGTEEVECI
PIVGMTGLGKTTLARKVWSDSQITAIFSKIIWVSVGQSNELEDIFFVILKSSTGPNQEFR
LTGENELAKVIASFGTEQHRCLIVLDDVWASELVDFFKNVLPENKKRHRILMTTRRRDLA
SCASERPYHLKFLTGEDSFRLLEKRVFDNGRCQNDLVELGKSIANKCGGLPLALVVIARA
LKVIQNVYEWKRIENNFWQYVVRENDTTSCWKIVEASYESLSSEMKTCFLYCLAFPKGYD
IPVQMLIRLWMAEGLIESSPINFSSSEDKADNYLMEFENLDLVIVSREITGSIKRVKCNE
MFYEFYKMEVTKESVFQELRLTPDFPSINDPDTSRRLHIESCDLPDFISRISSAEHVRSF
LCFSSEDLDQQTNLSSHVDIQLIRKAFPLLRVLKIESINIPSLKNLNLLFHLRYISISGN
FKELPAFFSKFWSLQSIIVNTSQPTLNIKANIWNMPKLTHLKTNKPSKLPLPSTQKGKGS
SSLLQTLSKISPETCNKAVLGQASNSLKKLSIQGKIEDSLQTNSDRFSTFEGFQTLEKFE
CLENLKLVSDVPCHTNDFQFPKALFRFLLKLKKLTLSKTMFDWKDATKLGQLECLEVLKL
KTDAFTGKSWNPEKGDFRKLQVLWIHSNDLHTWEASGSHFPKLRVLVLECPKLESVPAEL
SQFQQQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400019301
Transcript Infomation

pacid=37476049 locus=PGSC0003DMG401007461 ID=PGSC0003DMT400019301.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGCAGTAATGACTTTGCTTGTGGAGAGCTTGTGTCAACTAATCACTGAAAAA
GTGAAGCTGATTGGAGGTGCAAAGGATGAGTTGGATAATCTGCTGCAAGTAATTAACACA
CTGAAAGCATTCCTTCAGGATAATGATCAACAAGAAAGCAACAGCAATTCGTGGAAAACA
TTTGTGAAGAATATCCGAACACAAGCGCATAAAGCTGATGACGTTATTGACAAATTTGTA
CTTGAGGCGAAGCTGCATGAAGAAAAAAATATATGGAAAAAAACTTTATCTTTCGGCAGG
CATATCAAAAGAGTTAATAATCTTGCAAAAGGTATCAAAGATATCTGTGAGAAGGTGAAG
GTGATTCGCCAAGAAAATCCACAAGTTCTCCAGCCCAGACCAATGCTAAATCTACCCAGA
AGACTTGCAAGGGAGCCTCAGGCTACATTCTTGGAGGTTAGAAATATCGTTGGGTTCACT
ACAGAATCAAATGAAGTGATGGAGCGGCTTGTTGGAGGAACAGAGGAGGTAGAATGCATA
CCTATTGTGGGTATGACTGGACTTGGCAAAACCACACTGGCAAGAAAAGTATGGAGTGAT
TCTCAGATTACAGCTATATTTTCCAAGATCATTTGGGTTTCTGTCGGACAGTCCAACGAA
CTAGAGGATATCTTTTTTGTGATTCTCAAATCATCTACGGGACCCAATCAAGAATTTCGC
TTGACTGGTGAGAATGAACTAGCTAAAGTAATAGCTAGTTTTGGGACTGAACAACACAGG
TGTCTCATTGTGTTGGATGATGTGTGGGCGAGTGAACTTGTAGATTTTTTCAAAAATGTT
CTTCCAGAAAACAAGAAAAGACATAGGATCTTGATGACCACTCGCCGCAGAGATTTGGCT
AGCTGTGCAAGTGAAAGACCTTATCATCTCAAGTTTCTCACTGGAGAAGACAGTTTTCGG
TTGCTGGAAAAGAGAGTTTTCGACAATGGAAGGTGTCAAAATGATTTAGTAGAGCTTGGA
AAGAGTATTGCAAATAAATGTGGTGGATTACCACTTGCATTAGTGGTAATTGCTAGAGCT
TTAAAAGTTATTCAGAATGTATATGAATGGAAAAGGATTGAGAACAACTTTTGGCAGTAT
GTTGTGAGAGAGAATGACACAACAAGCTGCTGGAAAATTGTGGAAGCCAGTTATGAAAGT
TTGTCCTCTGAAATGAAAACGTGCTTCTTGTATTGCCTAGCCTTTCCTAAAGGCTACGAT
ATTCCTGTTCAGATGTTGATTCGCTTGTGGATGGCGGAGGGGCTAATAGAGTCGAGTCCA
ATAAATTTCTCTTCCTCTGAGGACAAAGCAGATAATTATTTGATGGAGTTTGAGAATTTG
GACCTTGTGATAGTGTCGAGAGAGATTACTGGTTCGATAAAAAGGGTTAAATGTAATGAG
ATGTTCTATGAGTTCTACAAGATGGAGGTGACTAAAGAAAGTGTTTTTCAAGAACTACGT
CTCACACCTGATTTTCCATCGATAAATGATCCAGATACTTCTCGTCGATTGCATATTGAA
TCATGTGATCTGCCAGATTTTATCTCCAGAATTTCCAGTGCAGAACATGTTAGATCTTTC
TTATGTTTTTCCTCGGAAGATCTAGACCAACAAACCAACTTATCCTCTCATGTTGACATT
CAACTCATCCGGAAAGCATTTCCACTTCTCAGGGTTTTGAAAATTGAATCAATCAACATT
CCCTCCTTGAAGAATCTTAACCTACTATTTCATCTGAGGTACATTTCTATCTCAGGTAAT
TTCAAGGAACTTCCTGCATTCTTTAGTAAGTTTTGGAGTTTACAATCTATTATAGTTAAT
ACATCCCAGCCCACTCTCAACATAAAAGCAAATATATGGAACATGCCAAAGTTGACGCAT
TTGAAGACCAACAAACCTTCTAAATTGCCTCTCCCTTCAACCCAAAAGGGAAAAGGTTCC
TCCTCCCTGCTGCAAACTCTTTCTAAGATTTCACCAGAAACTTGCAACAAAGCTGTGCTC
GGACAGGCTTCGAACAGCCTCAAAAAATTGAGTATTCAAGGGAAAATAGAAGATTCTCTT
CAAACTAACAGTGACCGATTCAGCACTTTTGAAGGGTTTCAAACTTTAGAAAAGTTTGAG
TGCCTAGAAAATTTGAAACTGGTAAGTGATGTTCCTTGCCATACTAATGATTTTCAGTTT
CCGAAAGCATTATTCAGATTTCTACTCAAGCTTAAGAAGTTAACTTTGTCAAAGACAATG
TTTGATTGGAAAGATGCAACTAAACTAGGGCAACTGGAATGCCTGGAGGTCCTCAAGTTG
AAAACTGATGCATTCACAGGGAAGTCATGGAATCCGGAGAAAGGTGATTTTCGAAAACTG
CAGGTCTTGTGGATTCATAGCAATGACCTCCATACTTGGGAGGCTTCAGGATCTCACTTC
CCCAAACTTAGGGTACTTGTTCTTGAGTGTCCTAAGCTTGAGAGTGTGCCAGCTGAACTA
TCTCAGTTTCAGCAGCAGAGTTAA