Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019290
CDS Infomation

pacid=37472531 polypeptide=PGSC0003DMP400013218 locus=PGSC0003DMG400007455 ID=PGSC0003DMT400019290.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCACCATCTCATGAAGAATCTGCTCCTCCAACTGATGTGGCACCTCCAACG
TTTAGTCCTCCGCCTACACCTTCTAGTCCATCTGATAGCTCACCACCACCTCCATCTTCT
AGTCCACCTCCTAGTTCACCACCACCTGCATCTTCTAGTCCACCTCCTAGTTCACCTCCA
CGTGAATCAACTAGTCCACCACCTAGATCACCACCACCTCAATCTTCTAGTCCACCACCA
GCCTCACCTCCACCTGAACCAACTCCTCCTTCTCCTGTCAGTTCACCTCCACAAACTTCA
TCACCTCCCCCTGCATTGTCACCTCCGCCACACGTACAGAATCCAGAACCTCCTCCAGCA
CCACAATCACATGGAAATTCATCCCCACCACAATCTCCTGAACCTAAAAAAGGTTCATCA
TCATCTTCACCACCTTCACCACCTTCATCCAACTCACCTGGGGATGGAGGTGGAGGTGGA
AATTCACCACCATCCCCAACATCTAAGTCATCAGATAATTCGCCTCCTTCACCAGCCTCA
GGCCCTCCTAAAGATTCGCCACCTTCACCAGCTGCATTATCTCCAAGTAACTCACCATCT
TCTGATTCACCCTCAAACTCATCAACACCAACATCTGTAATACAATGGTCACCACCACCT
CCATCCTCTAATGGTGCACAATCTTCTCTTAATCCTCCTTCATCACAAGTTCCTAGTAAC
CATAGTTCCGGAAACCGTTCAACAGGAAGTCCAAAGCCTGCTGGTGGCAACAGCAATGGT
ACTGCAGAGACAGTTTCCATTGGCGTTGTAATTGTTCTTTTTTTGGTTGGTATCATCGGA
GCAGTTGCATGGTGCATACGGAAGCGAAAGAAGAAGAATTCTGTCCATTGTAGTGGTTAT
GTCAAGCCAATCTCTGTGTGCTCCTCTCCAAAATCAGAGTCTGCTTTATTGAAGGTCAAT
GAATCAACACCTGAGAGAAATGGAACGAGCTCTAATTTCCTCAATTCTCCAGCAGACCCT
GGCGGATTCAACAATGCAAAGACATGGTTTACTTATCAAGAACTTGTTGAGGCCACTAAT
GATTTTTCAGCGAATAATGAATTAGGGAAGGGTGGATTTGGTTCTGTATACAAAGGCTAT
CTAGCAGATGGAAGATATGTCGCGGTAAAGCAGCTAAATATTGGTGGGAGCCAGGGCGAA
CGGGAATTTAGAGCTGAAGTTGAAATCATTAGCCGGATACACCATCGTCATTTGGTTTCA
CTTGTAGGTTATTGCATTTCAGAGAACAAAAGGCTCCTCGTTTATGACTATGTCTCCAAT
AATACCCTTTACTTCCATCTTCATGCACAAGGGAGGCCTGTCATGAATTGGCCAACACGT
GTTAAAATTGCTGTTGGCGCAGCTCGTGGAATAGCTTATCTGCATGAAGATTGTTATCCT
CGTATTATTCACAGGGACATTAAGTCATCAAACATTCTTTTAGATGATAACTTTGAGGCC
CATGTTGCTGATTTTGGACTAGCTAAATTAGCTCAGGATGCAGAAAGTCATATCACAACA
CGTGTCGTGGGAACATTTGGATACATGGCTCCTGAATATGCATCAACTGGCAAGCTGACT
GAAAAATCTGATGTATATTCCTTTGGCGTGGTACTTCTGGAGCTAATTACTGGAAGGAAG
TCAGTGGATACATCTCAGCCTTCAGGGCAAGAGAATCTAGTTGAGTGGGCACGACCTTTG
CTTAGTCGAGCACTTCAAAAGGAGGAATTTGATCTGTTGGCAGATCCGTGCCTTGAAAAA
AACTACGTTGGCATGGAGATGTTCCGAATGATTGAGGCTGCTGCATCTTGCGTGCGTCAC
TCATCTGCAAAGAGACCAGCAATGGGACAGATCATGAGAGCTTTCGATGGTATGGCTATA
CAAGATCTGTCAAACGGGATGAAAGTTGGTGAAAGTGCAATACATAGCGCTGCACTACAA
TCTGCAGAAATAAGTTGGTTTAGGAAAATGGCATTCGGTAAGCAAGATTTTAGTTCGGAT
TTTTTCAGCGAAAGTAATCAGAATAATAGAGAGTCAAATGAACATCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013218
PEP Infomation

pacid=37472531 transcript=PGSC0003DMT400019290 locus=PGSC0003DMG400007455 ID=PGSC0003DMT400019290.v4.03 annot-version=v4.03
Sequence

MDSSPSHEESAPPTDVAPPTFSPPPTPSSPSDSSPPPPSSSPPPSSPPPASSSPPPSSPP
RESTSPPPRSPPPQSSSPPPASPPPEPTPPSPVSSPPQTSSPPPALSPPPHVQNPEPPPA
PQSHGNSSPPQSPEPKKGSSSSSPPSPPSSNSPGDGGGGGNSPPSPTSKSSDNSPPSPAS
GPPKDSPPSPAALSPSNSPSSDSPSNSSTPTSVIQWSPPPPSSNGAQSSLNPPSSQVPSN
HSSGNRSTGSPKPAGGNSNGTAETVSIGVVIVLFLVGIIGAVAWCIRKRKKKNSVHCSGY
VKPISVCSSPKSESALLKVNESTPERNGTSSNFLNSPADPGGFNNAKTWFTYQELVEATN
DFSANNELGKGGFGSVYKGYLADGRYVAVKQLNIGGSQGEREFRAEVEIISRIHHRHLVS
LVGYCISENKRLLVYDYVSNNTLYFHLHAQGRPVMNWPTRVKIAVGAARGIAYLHEDCYP
RIIHRDIKSSNILLDDNFEAHVADFGLAKLAQDAESHITTRVVGTFGYMAPEYASTGKLT
EKSDVYSFGVVLLELITGRKSVDTSQPSGQENLVEWARPLLSRALQKEEFDLLADPCLEK
NYVGMEMFRMIEAAASCVRHSSAKRPAMGQIMRAFDGMAIQDLSNGMKVGESAIHSAALQ
SAEISWFRKMAFGKQDFSSDFFSESNQNNRESNEHP*

Transcript Sequence

Transcript ID

PGSC0003DMT400019290
Transcript Infomation

pacid=37472531 locus=PGSC0003DMG400007455 ID=PGSC0003DMT400019290.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCACCATCTCATGAAGAATCTGCTCCTCCAACTGATGTGGCACCTCCAACG
TTTAGTCCTCCGCCTACACCTTCTAGTCCATCTGATAGCTCACCACCACCTCCATCTTCT
AGTCCACCTCCTAGTTCACCACCACCTGCATCTTCTAGTCCACCTCCTAGTTCACCTCCA
CGTGAATCAACTAGTCCACCACCTAGATCACCACCACCTCAATCTTCTAGTCCACCACCA
GCCTCACCTCCACCTGAACCAACTCCTCCTTCTCCTGTCAGTTCACCTCCACAAACTTCA
TCACCTCCCCCTGCATTGTCACCTCCGCCACACGTACAGAATCCAGAACCTCCTCCAGCA
CCACAATCACATGGAAATTCATCCCCACCACAATCTCCTGAACCTAAAAAAGGTTCATCA
TCATCTTCACCACCTTCACCACCTTCATCCAACTCACCTGGGGATGGAGGTGGAGGTGGA
AATTCACCACCATCCCCAACATCTAAGTCATCAGATAATTCGCCTCCTTCACCAGCCTCA
GGCCCTCCTAAAGATTCGCCACCTTCACCAGCTGCATTATCTCCAAGTAACTCACCATCT
TCTGATTCACCCTCAAACTCATCAACACCAACATCTGTAATACAATGGTCACCACCACCT
CCATCCTCTAATGGTGCACAATCTTCTCTTAATCCTCCTTCATCACAAGTTCCTAGTAAC
CATAGTTCCGGAAACCGTTCAACAGGAAGTCCAAAGCCTGCTGGTGGCAACAGCAATGGT
ACTGCAGAGACAGTTTCCATTGGCGTTGTAATTGTTCTTTTTTTGGTTGGTATCATCGGA
GCAGTTGCATGGTGCATACGGAAGCGAAAGAAGAAGAATTCTGTCCATTGTAGTGGTTAT
GTCAAGCCAATCTCTGTGTGCTCCTCTCCAAAATCAGAGTCTGCTTTATTGAAGGTCAAT
GAATCAACACCTGAGAGAAATGGAACGAGCTCTAATTTCCTCAATTCTCCAGCAGACCCT
GGCGGATTCAACAATGCAAAGACATGGTTTACTTATCAAGAACTTGTTGAGGCCACTAAT
GATTTTTCAGCGAATAATGAATTAGGGAAGGGTGGATTTGGTTCTGTATACAAAGGCTAT
CTAGCAGATGGAAGATATGTCGCGGTAAAGCAGCTAAATATTGGTGGGAGCCAGGGCGAA
CGGGAATTTAGAGCTGAAGTTGAAATCATTAGCCGGATACACCATCGTCATTTGGTTTCA
CTTGTAGGTTATTGCATTTCAGAGAACAAAAGGCTCCTCGTTTATGACTATGTCTCCAAT
AATACCCTTTACTTCCATCTTCATGCACAAGGGAGGCCTGTCATGAATTGGCCAACACGT
GTTAAAATTGCTGTTGGCGCAGCTCGTGGAATAGCTTATCTGCATGAAGATTGTTATCCT
CGTATTATTCACAGGGACATTAAGTCATCAAACATTCTTTTAGATGATAACTTTGAGGCC
CATGTTGCTGATTTTGGACTAGCTAAATTAGCTCAGGATGCAGAAAGTCATATCACAACA
CGTGTCGTGGGAACATTTGGATACATGGCTCCTGAATATGCATCAACTGGCAAGCTGACT
GAAAAATCTGATGTATATTCCTTTGGCGTGGTACTTCTGGAGCTAATTACTGGAAGGAAG
TCAGTGGATACATCTCAGCCTTCAGGGCAAGAGAATCTAGTTGAGTGGGCACGACCTTTG
CTTAGTCGAGCACTTCAAAAGGAGGAATTTGATCTGTTGGCAGATCCGTGCCTTGAAAAA
AACTACGTTGGCATGGAGATGTTCCGAATGATTGAGGCTGCTGCATCTTGCGTGCGTCAC
TCATCTGCAAAGAGACCAGCAATGGGACAGATCATGAGAGCTTTCGATGGTATGGCTATA
CAAGATCTGTCAAACGGGATGAAAGTTGGTGAAAGTGCAATACATAGCGCTGCACTACAA
TCTGCAGAAATAAGTTGGTTTAGGAAAATGGCATTCGGTAAGCAAGATTTTAGTTCGGAT
TTTTTCAGCGAAAGTAATCAGAATAATAGAGAGTCAAATGAACATCCTTAG